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MS000553 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000553
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChlorovirus glycoprotein repeat domain-containing protein
Genome locationscaffold64:442570..442710
RNA-Seq ExpressionMS000553
SyntenyMS000553
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER55032.1 chlorovirus glycoprotein repeat domain-containing protein [Striga asiatica]7.1e-0765.96Show/hide
Query:  ELGSAADWRLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG
        + GS     L+S+PSTPLISGL  FIQPSMWS +RFS+TRTT V IG
Subjt:  ELGSAADWRLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG

TrEMBL top hitse value%identityAlignment
A0A0A0KFA8 Uncharacterized protein1.4e-0559.57Show/hide
Query:  ELGSAADWRLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG
        ELGS  + R +S P  P ISG   F QP  WSKERFSMT+TT +LIG
Subjt:  ELGSAADWRLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG

A0A0A9J9Y0 Uncharacterized protein2.7e-0459.57Show/hide
Query:  ELGSAADWRLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG
        E GS A  RL+S P +P +SG +R  QP MWSK RFS+T TT VLIG
Subjt:  ELGSAADWRLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG

A0A5A7RC13 Chlorovirus glycoprotein repeat domain-containing protein3.4e-0765.96Show/hide
Query:  ELGSAADWRLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG
        + GS     L+S+PSTPLISGL  FIQPSMWS +RFS+TRTT V IG
Subjt:  ELGSAADWRLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG

A0A7C8YH05 Uncharacterized protein1.1e-0882.05Show/hide
Query:  RLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG
        RL+SEP TPLISGL RFIQP+MWSKERFSMT+TT VL+G
Subjt:  RLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG

A0A7C8YXD6 Uncharacterized protein5.5e-0560.42Show/hide
Query:  ELGSAADWRLNSEPSTPLISGLIR-FIQPSMWSKERFSMTRTTMVLIG
        E GS  +  L+  PSTP + GLI  FI P MWSKERFS TRTT+V IG
Subjt:  ELGSAADWRLNSEPSTPLISGLIR-FIQPSMWSKERFSMTRTTMVLIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGTTGGGATCCGCAGCGGACTGGAGGTTGAATTCGGAGCCATCGACGCCATTGATCTCGGGATTGATTCGCTTCATCCAGCCGAGCATGTGGTCGAAGGAGCGATTCTC
CATGACGAGGACGACGATGGTGTTGATAGGG
mRNA sequenceShow/hide mRNA sequence
GAGTTGGGATCCGCAGCGGACTGGAGGTTGAATTCGGAGCCATCGACGCCATTGATCTCGGGATTGATTCGCTTCATCCAGCCGAGCATGTGGTCGAAGGAGCGATTCTC
CATGACGAGGACGACGATGGTGTTGATAGGG
Protein sequenceShow/hide protein sequence
ELGSAADWRLNSEPSTPLISGLIRFIQPSMWSKERFSMTRTTMVLIG