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MS000554 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000554
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold64:473938..474195
RNA-Seq ExpressionMS000554
SyntenyMS000554
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588222.1 hypothetical protein SDJN03_16787, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1259.14Show/hide
Query:  MPRSRHQRQPSQVLPPELISGEGPPPILDLGRAIVAGAVSGQARDQADGAGSASAAA-------TLQMSQTPAGQEATGAAHFPQLPKTPPSA
        MPR RH RQPSQVLPPELISGE P  ILD  R  VAGA SGQ    A  A +A+AAA        +Q S+  A QE +GA  FPQL KTPPSA
Subjt:  MPRSRHQRQPSQVLPPELISGEGPPPILDLGRAIVAGAVSGQARDQADGAGSASAAA-------TLQMSQTPAGQEATGAAHFPQLPKTPPSA

KAG6590166.1 hypothetical protein SDJN03_15589, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1363.64Show/hide
Query:  MPRSRHQRQPSQVLPPELISGEGPPPILDLGRAIVAGAVSGQARDQADGAGS-ASAAATLQMSQTPAGQE--ATGAAHFPQLPKTPPS
        MPR RHQRQPSQVLPPELISG  P  ILD G+A VA  VSGQ     + A + A+AAA LQ S+T  GQE   +G+ HFPQLPKTPPS
Subjt:  MPRSRHQRQPSQVLPPELISGEGPPPILDLGRAIVAGAVSGQARDQADGAGS-ASAAATLQMSQTPAGQE--ATGAAHFPQLPKTPPS

KGN66547.1 hypothetical protein Csa_007065 [Cucumis sativus]2.1e-1259.55Show/hide
Query:  MPRSRHQRQPSQVLPPELISGEGPPPILDLGRAIVAGAVSGQ----ARDQADGAGSASAAATLQMSQTPAGQEATGAAHFPQLPKTPPS
        MPR RHQRQ SQVLPP+ IS E P  ILD     VAGAVSGQ    ++  A+ A +A+AA  LQ S+ PAGQE +GA HF QLPKT PS
Subjt:  MPRSRHQRQPSQVLPPELISGEGPPPILDLGRAIVAGAVSGQ----ARDQADGAGSASAAATLQMSQTPAGQEATGAAHFPQLPKTPPS

TrEMBL top hitse value%identityAlignment
A0A0A0M0A1 Uncharacterized protein1.0e-1259.55Show/hide
Query:  MPRSRHQRQPSQVLPPELISGEGPPPILDLGRAIVAGAVSGQ----ARDQADGAGSASAAATLQMSQTPAGQEATGAAHFPQLPKTPPS
        MPR RHQRQ SQVLPP+ IS E P  ILD     VAGAVSGQ    ++  A+ A +A+AA  LQ S+ PAGQE +GA HF QLPKT PS
Subjt:  MPRSRHQRQPSQVLPPELISGEGPPPILDLGRAIVAGAVSGQ----ARDQADGAGSASAAATLQMSQTPAGQEATGAAHFPQLPKTPPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGGTCGCGACACCAGCGTCAGCCCTCCCAAGTTCTCCCGCCGGAGCTAATTTCCGGTGAAGGGCCGCCGCCGATCTTGGACTTGGGCAGAGCAATAGTCGCCGG
AGCAGTTTCCGGGCAAGCTCGTGATCAGGCAGATGGCGCTGGCAGTGCAAGCGCCGCCGCCACGCTTCAGATGTCCCAAACTCCGGCCGGTCAGGAGGCCACCGGCGCCG
CCCACTTCCCTCAGCTTCCCAAAACGCCGCCGTCTGCT
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGGTCGCGACACCAGCGTCAGCCCTCCCAAGTTCTCCCGCCGGAGCTAATTTCCGGTGAAGGGCCGCCGCCGATCTTGGACTTGGGCAGAGCAATAGTCGCCGG
AGCAGTTTCCGGGCAAGCTCGTGATCAGGCAGATGGCGCTGGCAGTGCAAGCGCCGCCGCCACGCTTCAGATGTCCCAAACTCCGGCCGGTCAGGAGGCCACCGGCGCCG
CCCACTTCCCTCAGCTTCCCAAAACGCCGCCGTCTGCT
Protein sequenceShow/hide protein sequence
MPRSRHQRQPSQVLPPELISGEGPPPILDLGRAIVAGAVSGQARDQADGAGSASAAATLQMSQTPAGQEATGAAHFPQLPKTPPSA