; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000561 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000561
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4228 domain protein
Genome locationscaffold64:623533..624165
RNA-Seq ExpressionMS000561
SyntenyMS000561
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588215.1 hypothetical protein SDJN03_16780, partial [Cucurbita argyrosperma subsp. sororia]8.5e-7671.5Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS
        MGNS+SP CL   I T SRR SS+V L+F  G T+ LTG  H+AGEIMFQFPD ++CHADSFFIGHP+P+LAIDD LLAG TYFVLPID F S DVLSTS
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS

Query:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY
        SLA++G G AKFSG+ PFEY+RG NGR++IK+VPEF++ L+SPAA  GS          GG+FLCSTPELQKHYDQLVGS KGQ+WSPKLE+ISEYKIRY
Subjt:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY

Query:  SPCKFVGFKLKQKE
        SPCKFVGFK+KQKE
Subjt:  SPCKFVGFKLKQKE

KAG7022114.1 hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-7570.56Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS
        MGNS+SP CL   I T  R  SS+V L+F  G T+ LTG  H+AGEIMFQFPD ++CHADSFFIGHP+P+LAIDD LLAG TYFVLPID F S DVLSTS
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS

Query:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY
        SLA++G   AKFSG+ PFEY+RG NGR++IK+VPEF++ L+SPAA         G+GG GG+FLCSTPELQKHYDQLVGS KGQ+WSPKLE+ISEYKIRY
Subjt:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY

Query:  SPCKFVGFKLKQKE
        SPCKFVGFK+KQKE
Subjt:  SPCKFVGFKLKQKE

XP_022153243.1 uncharacterized protein LOC111020778 [Momordica charantia]1.1e-11598.58Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPSDVLSTSSL
        MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALA+DDHLLAGHTYFVLPIDRFPSDV STSSL
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPSDVLSTSSL

Query:  AALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGSKGQMWSPKLETISEYKIRYSPC
        AALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGG GGSFLCSTPELQKHYDQLVGSKGQMWSPKLETISEYKIRYSPC
Subjt:  AALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGSKGQMWSPKLETISEYKIRYSPC

Query:  KFVGFKLKQKE
        KFVGFKLKQKE
Subjt:  KFVGFKLKQKE

XP_022927424.1 uncharacterized protein LOC111434251 [Cucurbita moschata]2.0e-7772.43Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS
        MGNS+SP CL   I T SRRSSS+V L+F  G T+ LTG  H+AGEIMFQFPD ++CHADSFFIGHP+P+LAIDD LLAG TYFVLPID F S DVLSTS
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS

Query:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY
        SLA++G G AKFSG+ PFEY+RG NGR++IK+VPEF++ L+SPAA         G+GG GG+FLCSTPELQKHYDQLVGS KGQ+WSPKLE+ISEYKIRY
Subjt:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY

Query:  SPCKFVGFKLKQKE
        SPCKFVGFK+KQKE
Subjt:  SPCKFVGFKLKQKE

XP_023530355.1 uncharacterized protein LOC111792953 [Cucurbita pepo subsp. pepo]4.2e-7570.09Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS
        MGNS+SP CL   I T  RR SS+V L+F  G T+ LTG  H+AGEIMFQFPD ++CHADSFFIGHP+P+LAIDD L+AG TYFV+PID F S DVLSTS
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS

Query:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY
        SLA++G G AKFSG+ PFEY+RG NGR++IK+VPEF++ L+SPAA         G+ G GG+FLCSTPELQKHYDQLVGS KGQ+WSPKLE+ISEYKIRY
Subjt:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY

Query:  SPCKFVGFKLKQKE
        SPCKFVGFK+KQKE
Subjt:  SPCKFVGFKLKQKE

TrEMBL top hitse value%identityAlignment
A0A0A0LZV5 Uncharacterized protein5.6e-7368.66Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTG-KHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS
        MGN++SP  L   I  C RR  S+VKLVF  G T+ L G  H AGEIMFQFPD +VCHA+SFFIGHP+P+L+IDD L+AG TY +LPIDRF S DVLSTS
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTG-KHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS

Query:  SLAALGGG---AAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYK
        SLA +G G     KFSG CPFEY+RG NG++LIKV+PEFI+ L+S AA  G    G+ +GG GG FLCSTPEL+KHYDQLVGS KGQ+WSPKLETISEYK
Subjt:  SLAALGGG---AAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYK

Query:  IRYSPCKFVGFKLKQKE
        IRYSPC+FVGFKLKQKE
Subjt:  IRYSPCKFVGFKLKQKE

A0A1S3BP11 uncharacterized protein LOC1034919831.0e-7470.05Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS
        MGN++SP CL    I+  R   S+VKLVF +G T+ L G  H AGEIMFQFPD +VCHA+SFFIGHP+P+L+IDD LL G TY VLPIDRF S DVLSTS
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS

Query:  SLAALGGG---AAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYK
        SLA +G G   A KFSG CPFEY+RG NGR+LIKV+PEFI+ L+SPAA      DG   GG GG FLCSTPEL+KHYDQLVGS KGQ+WSPKLETISEYK
Subjt:  SLAALGGG---AAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYK

Query:  IRYSPCKFVGFKLKQKE
        IRYSPC+FVGFKLKQKE
Subjt:  IRYSPCKFVGFKLKQKE

A0A5A7UN34 DUF4228 domain protein1.3e-7470.05Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS
        MGN++SP CL    I+  R   S+VKLVF +G T+ L G  H AGEIMFQFPD +VCHA+SFFIGHP+P+L+IDD LL G TY VLPIDRF S DVLSTS
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS

Query:  SLAALGGG---AAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYK
        SLA +G G   A KFSG CPFEY+RG NGR+LIKV+PEFI+ L+SPAA      DG   GG GG FLCSTPEL+KHYDQLVGS KGQ+WSPKLETISEYK
Subjt:  SLAALGGG---AAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYK

Query:  IRYSPCKFVGFKLKQKE
        IRYSPC+FVGFKLKQKE
Subjt:  IRYSPCKFVGFKLKQKE

A0A6J1DGZ2 uncharacterized protein LOC1110207785.3e-11698.58Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPSDVLSTSSL
        MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALA+DDHLLAGHTYFVLPIDRFPSDV STSSL
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPSDVLSTSSL

Query:  AALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGSKGQMWSPKLETISEYKIRYSPC
        AALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGG GGSFLCSTPELQKHYDQLVGSKGQMWSPKLETISEYKIRYSPC
Subjt:  AALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGSKGQMWSPKLETISEYKIRYSPC

Query:  KFVGFKLKQKE
        KFVGFKLKQKE
Subjt:  KFVGFKLKQKE

A0A6J1EHY7 uncharacterized protein LOC1114342519.8e-7872.43Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS
        MGNS+SP CL   I T SRRSSS+V L+F  G T+ LTG  H+AGEIMFQFPD ++CHADSFFIGHP+P+LAIDD LLAG TYFVLPID F S DVLSTS
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGK-HVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPS-DVLSTS

Query:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY
        SLA++G G AKFSG+ PFEY+RG NGR++IK+VPEF++ L+SPAA         G+GG GG+FLCSTPELQKHYDQLVGS KGQ+WSPKLE+ISEYKIRY
Subjt:  SLAALGGGAAKFSGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGS-KGQMWSPKLETISEYKIRY

Query:  SPCKFVGFKLKQKE
        SPCKFVGFK+KQKE
Subjt:  SPCKFVGFKLKQKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28190.1 unknown protein1.6e-1634.44Show/hide
Query:  VKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPSDVLSTSSLAAL-----GGGAAKFSGECPFEYL
        +KLV  +G+ ++     V  E+   FP   +C +D  +IG   P L+  + L  G  YF+LP D F +D LS  ++A L     GG   K + + P  +L
Subjt:  VKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPSDVLSTSSLAAL-----GGGAAKFSGECPFEYL

Query:  --RGANG-RLLIKVVPEFIMSLVSPAA--AAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGSKGQMWSPKLETISEYK
          +G  G RL I+V  EF+  L+            + +  GG G   +C+T +L+K Y QLVG +   W PKLETI+E K
Subjt:  --RGANG-RLLIKVVPEFIMSLVSPAA--AAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGSKGQMWSPKLETISEYK

AT5G12340.1 unknown protein2.7e-4848.02Show/hide
Query:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEG-TTRILTG--KHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPSDVLST
        MG S+  SC         RR    V LVF+E  +T+ L G  KHVAGEIMF+FPD+IVCHADSF+IG  +PALA+DD+L+ G TYFVLPI+RF   +L+T
Subjt:  MGNSISPSCLRWRIITCSRRSSSSVKLVFYEG-TTRILTG--KHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPSDVLST

Query:  SSLAALGGGAAKF------------SGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCG-GSFLCSTPELQKHYDQLVGSKGQMWS
        S L+                     S   PFEY +G NG++LIKV PEFI+SL+            +    CG  S +C++PEL+K YDQLVG++  MWS
Subjt:  SSLAALGGGAAKF------------SGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCG-GSFLCSTPELQKHYDQLVGSKGQMWS

Query:  PKLETISEYKIRYSPCKFVGFKLKQKE
        P L+TISE+KIR SP +F G   KQ E
Subjt:  PKLETISEYKIRYSPCKFVGFKLKQKE

AT5G66580.1 unknown protein9.2e-0425.74Show/hide
Query:  SSSVKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPI---------DRFPSDVLSTSSLAALGGGAAKFSG
        S S KL+  +GT +  +      +I+ + P   VC++D       + A+A ++ L +G  YFVLP+         +   +  +  SS     GG    SG
Subjt:  SSSVKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPI---------DRFPSDVLSTSSLAALGGGAAKFSG

Query:  E
        +
Subjt:  E


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTCGATCTCTCCCAGCTGTCTGCGATGGAGAATTATTACTTGTAGCCGCCGCTCCTCCTCCTCCGTGAAACTCGTCTTCTACGAAGGCACCACCAGAATTCT
CACCGGAAAACACGTCGCCGGCGAGATCATGTTCCAGTTTCCCGATCGGATCGTCTGCCACGCCGATTCCTTCTTCATCGGCCATCCGCTCCCCGCCTTGGCCATCGACG
ACCATCTCCTCGCTGGCCACACCTACTTCGTTCTCCCCATCGATCGCTTCCCCTCCGATGTTCTCTCCACGTCATCACTCGCCGCCCTGGGTGGAGGCGCCGCCAAATTC
TCCGGCGAGTGTCCGTTTGAGTATCTCCGGGGCGCGAATGGGAGACTTCTGATTAAGGTCGTCCCGGAGTTCATTATGAGCCTCGTTTCTCCCGCGGCAGCTGCCGGAAG
CCCTGGCGACGGCGACGGCGACGGCGGCTGCGGAGGTAGTTTTTTGTGTAGTACGCCGGAGTTGCAGAAGCATTACGATCAGCTTGTTGGATCGAAAGGGCAAATGTGGT
CGCCGAAACTGGAGACGATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAAATTTGTAGGCTTTAAACTCAAGCAAAAAGAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTCGATCTCTCCCAGCTGTCTGCGATGGAGAATTATTACTTGTAGCCGCCGCTCCTCCTCCTCCGTGAAACTCGTCTTCTACGAAGGCACCACCAGAATTCT
CACCGGAAAACACGTCGCCGGCGAGATCATGTTCCAGTTTCCCGATCGGATCGTCTGCCACGCCGATTCCTTCTTCATCGGCCATCCGCTCCCCGCCTTGGCCATCGACG
ACCATCTCCTCGCTGGCCACACCTACTTCGTTCTCCCCATCGATCGCTTCCCCTCCGATGTTCTCTCCACGTCATCACTCGCCGCCCTGGGTGGAGGCGCCGCCAAATTC
TCCGGCGAGTGTCCGTTTGAGTATCTCCGGGGCGCGAATGGGAGACTTCTGATTAAGGTCGTCCCGGAGTTCATTATGAGCCTCGTTTCTCCCGCGGCAGCTGCCGGAAG
CCCTGGCGACGGCGACGGCGACGGCGGCTGCGGAGGTAGTTTTTTGTGTAGTACGCCGGAGTTGCAGAAGCATTACGATCAGCTTGTTGGATCGAAAGGGCAAATGTGGT
CGCCGAAACTGGAGACGATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAAATTTGTAGGCTTTAAACTCAAGCAAAAAGAA
Protein sequenceShow/hide protein sequence
MGNSISPSCLRWRIITCSRRSSSSVKLVFYEGTTRILTGKHVAGEIMFQFPDRIVCHADSFFIGHPLPALAIDDHLLAGHTYFVLPIDRFPSDVLSTSSLAALGGGAAKF
SGECPFEYLRGANGRLLIKVVPEFIMSLVSPAAAAGSPGDGDGDGGCGGSFLCSTPELQKHYDQLVGSKGQMWSPKLETISEYKIRYSPCKFVGFKLKQKE