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MS000563 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000563
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S7, chloroplastic
Genome locationscaffold64:712716..713033
RNA-Seq ExpressionMS000563
SyntenyMS000563
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR005717 - Ribosomal protein S7, bacterial/organellar-type
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OWK25895.1 30S ribosomal protein S7, partial [Rhizobium yanglingense]4.2e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

YP_005088851.1 ribosomal protein S7 [Pongamia pinnata]4.2e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

YP_009460211.1 ribosomal protein S7 [Dalbergia hainanensis]4.2e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

YP_009769129.1 ribosomal protein S7 [Falcataria moluccana]4.2e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

YP_009870081.1 ribosomal protein S7 [Bonnetia paniculata]4.2e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

TrEMBL top hitse value%identityAlignment
A0A0N6WC30 30S ribosomal protein S7, chloroplastic2.0e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

A0A1D0C4Q1 30S ribosomal protein S7, chloroplastic2.0e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

A0A1D0CEA0 30S ribosomal protein S7, chloroplastic2.0e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

A0A7G9M8A0 30S ribosomal protein S7, chloroplastic2.0e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

U6A5X7 Ribosomal protein S72.0e-4798.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

SwissProt top hitse value%identityAlignment
B1NWJ5 30S ribosomal protein S7, chloroplastic5.5e-5098.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

P07135 30S ribosomal protein S7, chloroplastic7.1e-5097.17Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVP+EIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

Q49KT8 30S ribosomal protein S7, chloroplastic5.5e-5098.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

Q6EM99 30S ribosomal protein S7, chloroplastic5.5e-5098.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

Q9B1A1 30S ribosomal protein S7, chloroplastic5.5e-5098.11Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RAMKKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein1.1e-0529.81Show/hide
Query:  KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKEETHRMAE
        +TE +   ++  A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A RK+E  H +A 
Subjt:  KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKEETHRMAE

Query:  ANRA
         NR+
Subjt:  ANRA

ATCG00900.1 Ribosomal protein S7p/S5e family protein8.6e-5197.17Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RA+KKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

ATCG01240.1 ribosomal protein S78.6e-5197.17Show/hide
Query:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
        RA+KKIQQKTETNP  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM
Subjt:  RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRM

Query:  AEANRA
        AEANRA
Subjt:  AEANRA

ATMG01270.1 mitochondrial ribosomal protein S71.1e-0529.81Show/hide
Query:  KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKEETHRMAE
        +TE +   ++  A+  + P   V    V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G A RK+E  H +A 
Subjt:  KTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAIRKKEETHRMAE

Query:  ANRA
         NR+
Subjt:  ANRA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGG
CGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTT
TCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCT
mRNA sequenceShow/hide mRNA sequence
CGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACGAGATGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAGG
CGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTT
TCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCT
Protein sequenceShow/hide protein sequence
RAMKKIQQKTETNPRDVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRA