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MS000605 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000605
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCRIB domain-containing protein
Genome locationscaffold93:301597..301800
RNA-Seq ExpressionMS000605
SyntenyMS000605
Gene Ontology termsNA
InterPro domainsIPR000095 - CRIB domain
IPR036936 - CRIB domain superfamily
IPR044509 - CRIB domain-containing protein RIC2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464328.1 PREDICTED: CRIB domain-containing protein RIC4-like [Cucumis melo]3.6e-2073.68Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNP-------IKGWE-NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS
        MEIGYPTDVKHVTHIG+DGSTTTNP          W+ NNLN+FVPSEFL +FPSIS RQFELSMAAQTQ  LLH+
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNP-------IKGWE-NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS

XP_011656483.1 CRIB domain-containing protein RIC4 [Cucumis sativus]3.6e-2073.68Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNP-------IKGWE-NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS
        MEIGYPTDVKHVTHIG+DGSTTTNP          W+ NNLN+FVPSEFL +FPSIS RQFELSMAAQTQ  LLH+
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNP-------IKGWE-NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS

XP_022150356.1 CRIB domain-containing protein RIC4-like [Momordica charantia]7.8e-31100Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS
        MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS

XP_023513885.1 CRIB domain-containing protein RIC4-like [Cucurbita pepo subsp. pepo]2.6e-1873.61Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNP----LLHS
        MEIGYPTDVKHVTHIG+DGSTTTNPIKGW+NNL +F+      +FPSISLRQFELSMAAQ Q      LLHS
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNP----LLHS

XP_038886498.1 CRIB domain-containing protein RIC4-like [Benincasa hispida]2.5e-2175Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPI----KGWE----NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS
        MEIGYPTDVKHVTHIG+DGSTTTNPI      W+    NNLNNFVPSEFL++FPSISLRQFELSMAAQ Q  L+H+
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPI----KGWE----NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS

TrEMBL top hitse value%identityAlignment
A0A0A0K831 CRIB domain-containing protein1.8e-2073.68Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNP-------IKGWE-NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS
        MEIGYPTDVKHVTHIG+DGSTTTNP          W+ NNLN+FVPSEFL +FPSIS RQFELSMAAQTQ  LLH+
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNP-------IKGWE-NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS

A0A1S3CMR6 CRIB domain-containing protein RIC4-like1.8e-2073.68Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNP-------IKGWE-NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS
        MEIGYPTDVKHVTHIG+DGSTTTNP          W+ NNLN+FVPSEFL +FPSIS RQFELSMAAQTQ  LLH+
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNP-------IKGWE-NNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS

A0A6J1DBA0 CRIB domain-containing protein RIC4-like3.8e-31100Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS
        MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS

A0A6J1H8M6 CRIB domain-containing protein RIC4-like8.2e-1873.24Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNP---LLHS
        MEIG+PTDVKHVTHIG+DGSTTTNPIKGW+ NLN F+      +FPSISLRQFELSMAAQ Q     LLHS
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNP---LLHS

A0A7N2MSY2 CRIB domain-containing protein6.3e-1878.79Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLL
        MEIGYPTDVKHVTHIG+DGSTTTNPIKGWEN  N     E LS FPSISLRQFEL+MAAQT  PL+
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLL

SwissProt top hitse value%identityAlignment
F4IVV0 CRIB domain-containing protein RIC12.9e-0462.5Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENN
        M+IG+PTDVKHV HIG DG T T P   W N+
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENN

Q8GYU0 CRIB domain-containing protein RIC23.8e-0453.66Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEF
        MEIG+PTDVKH++HIGVDG+ TT     ++N  ++F  S F
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEF

Q9FFD5 CRIB domain-containing protein RIC46.5e-0451.11Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTT--TNPIKGWENNLNNFVPSEFLS
        MEIG PT+VKHV+HIG +   T  T P KGWE    + +P E L+
Subjt:  MEIGYPTDVKHVTHIGVDGSTT--TNPIKGWENNLNNFVPSEFLS

Q9M0Y9 CRIB domain-containing protein RIC108.5e-0451.06Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPS
        +EIG+PTDVKHV HIG +GS+ + P  GW +     V +E LS  PS
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPS

Arabidopsis top hitse value%identityAlignment
AT1G27380.1 ROP-interactive CRIB motif-containing protein 22.7e-0553.66Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEF
        MEIG+PTDVKH++HIGVDG+ TT     ++N  ++F  S F
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEF

AT1G27380.2 ROP-interactive CRIB motif-containing protein 22.7e-0553.66Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEF
        MEIG+PTDVKH++HIGVDG+ TT     ++N  ++F  S F
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEF

AT2G33460.1 ROP-interactive CRIB motif-containing protein 12.1e-0562.5Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENN
        M+IG+PTDVKHV HIG DG T T P   W N+
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENN

AT4G04900.1 ROP-interactive CRIB motif-containing protein 106.0e-0551.06Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPS
        +EIG+PTDVKHV HIG +GS+ + P  GW +     V +E LS  PS
Subjt:  MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPS

AT5G16490.1 ROP-interactive CRIB motif-containing protein 44.6e-0551.11Show/hide
Query:  MEIGYPTDVKHVTHIGVDGSTT--TNPIKGWENNLNNFVPSEFLS
        MEIG PT+VKHV+HIG +   T  T P KGWE    + +P E L+
Subjt:  MEIGYPTDVKHVTHIGVDGSTT--TNPIKGWENNLNNFVPSEFLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACACATAGGAGTTGATGGCTCCACCACTACAAACCCTATAAAGGGATGGGAAAATAATCTCAATAACTTTGT
TCCTTCTGAATTTCTCTCTAATTTCCCTTCCATTTCTTTAAGGCAATTTGAACTTTCAATGGCTGCTCAAACACAAAATCCTCTTCTTCATTCA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACACATAGGAGTTGATGGCTCCACCACTACAAACCCTATAAAGGGATGGGAAAATAATCTCAATAACTTTGT
TCCTTCTGAATTTCTCTCTAATTTCCCTTCCATTTCTTTAAGGCAATTTGAACTTTCAATGGCTGCTCAAACACAAAATCCTCTTCTTCATTCA
Protein sequenceShow/hide protein sequence
MEIGYPTDVKHVTHIGVDGSTTTNPIKGWENNLNNFVPSEFLSNFPSISLRQFELSMAAQTQNPLLHS