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MS000619 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000619
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold93:448023..448883
RNA-Seq ExpressionMS000619
SyntenyMS000619
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592883.1 hypothetical protein SDJN03_12359, partial [Cucurbita argyrosperma subsp. sororia]3.6e-6155.86Show/hide
Query:  LNKKKTKILEEETQATFMAAIATTIESDLAESAPASVSHFKIPPFLLKTFRKGPFDHCNDHYVEGKRNSSEIEIKKNWIRAPEKLFEVASVICKIFGGAK
        L+K + K  +EETQ   +  I  T  SD AES   SVS+ K+P F LK FRK  FD+C D+ ++ K NS EIE KK W      L EVAS+ CKIFGG K
Subjt:  LNKKKTKILEEETQATFMAAIATTIESDLAESAPASVSHFKIPPFLLKTFRKGPFDHCNDHYVEGKRNSSEIEIKKNWIRAPEKLFEVASVICKIFGGAK

Query:  LSACGIGSKVVDGEDEDDEEDRGDYCLSESEGGEDYRV--EKIFAAESDDGSGTEKKIGRDEKISSQSRHPTSILEVFSKKNAVNFSFSFNLGFNFIKSR
        LSACGIG K +DG+D+D         LSESE G+DYR   E+IFAAES+  S TE  I  DEK SSQSR PTSIL++F K+N       FN  FNFIKSR
Subjt:  LSACGIGSKVVDGEDEDDEEDRGDYCLSESEGGEDYRV--EKIFAAESDDGSGTEKKIGRDEKISSQSRHPTSILEVFSKKNAVNFSFSFNLGFNFIKSR

Query:  ICKGKNGDRNSNLNYDQHLREIESAARLTVFGIRENPKRLLQIPSRERKLTTEN-----SYHEDDENGEELWQKRILMGEKCKPL-NTSV
        ICK K+G RN NLNY+++LR  ESA    +F  REN KRL QIPS++RK T E      SYHE DENG+ LWQKRILMG +CKPL NTS+
Subjt:  ICKGKNGDRNSNLNYDQHLREIESAARLTVFGIRENPKRLLQIPSRERKLTTEN-----SYHEDDENGEELWQKRILMGEKCKPL-NTSV

KAG6607704.1 hypothetical protein SDJN03_01046, partial [Cucurbita argyrosperma subsp. sororia]9.7e-0645.79Show/hide
Query:  LNKKKTKILEEETQATFMAAIATTIESDLAESAPASVSHFKIPPFLL----KTFRKGPFDHCNDHYV-EGKRNSSEIEIKKNWIRAPEKLFEVASVICKI
        L+K + K  +EETQ   +  I  T  SD AES   SVS+ K+P F L    KTFRK   D          K+NS EIE KK W      L EVAS+ CKI
Subjt:  LNKKKTKILEEETQATFMAAIATTIESDLAESAPASVSHFKIPPFLL----KTFRKGPFDHCNDHYV-EGKRNSSEIEIKKNWIRAPEKLFEVASVICKI

Query:  FGGAKLS
        FGG K S
Subjt:  FGGAKLS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTCCTTAAACAAGAAGAAAACGAAAATTTTGGAAGAAGAAACTCAAGCTACTTTCATGGCTGCCATCGCCACCACCATAGAATCCGACCTCGCGGAATCGGCCCCTGC
TTCCGTCTCGCACTTCAAGATCCCACCGTTCTTGCTCAAAACCTTTCGAAAAGGACCATTTGATCACTGCAACGACCACTATGTGGAGGGAAAACGAAATTCCAGCGAGA
TCGAGATCAAGAAGAACTGGATCCGCGCTCCGGAGAAGCTCTTCGAAGTTGCCTCCGTGATCTGCAAAATCTTCGGCGGAGCGAAACTGTCGGCCTGCGGAATCGGAAGC
AAGGTCGTCGATGGAGAAGATGAAGACGACGAAGAAGATCGTGGAGATTATTGTTTGAGCGAATCGGAAGGCGGAGAGGATTATCGCGTTGAGAAGATTTTCGCGGCGGA
ATCCGACGACGGGTCGGGAACGGAGAAGAAAATTGGACGAGACGAGAAAATTTCAAGCCAATCGAGACATCCTACATCGATCTTGGAGGTATTTAGCAAGAAGAATGCTG
TCAATTTCAGTTTCAGTTTCAATTTAGGTTTCAATTTCATCAAGAGCAGAATCTGCAAGGGCAAAAACGGCGACAGAAACAGCAATCTCAACTACGATCAACATCTCCGA
GAAATTGAATCTGCCGCTCGATTAACGGTGTTTGGAATCCGAGAAAATCCGAAACGACTGCTTCAGATTCCGTCCCGAGAACGGAAACTGACGACGGAAAATTCATATCA
TGAAGATGATGAAAACGGAGAAGAATTGTGGCAGAAAAGAATTCTAATGGGAGAGAAATGCAAACCTCTGAATACTTCTGTAAGTCTTCGA
mRNA sequenceShow/hide mRNA sequence
GATTCCTTAAACAAGAAGAAAACGAAAATTTTGGAAGAAGAAACTCAAGCTACTTTCATGGCTGCCATCGCCACCACCATAGAATCCGACCTCGCGGAATCGGCCCCTGC
TTCCGTCTCGCACTTCAAGATCCCACCGTTCTTGCTCAAAACCTTTCGAAAAGGACCATTTGATCACTGCAACGACCACTATGTGGAGGGAAAACGAAATTCCAGCGAGA
TCGAGATCAAGAAGAACTGGATCCGCGCTCCGGAGAAGCTCTTCGAAGTTGCCTCCGTGATCTGCAAAATCTTCGGCGGAGCGAAACTGTCGGCCTGCGGAATCGGAAGC
AAGGTCGTCGATGGAGAAGATGAAGACGACGAAGAAGATCGTGGAGATTATTGTTTGAGCGAATCGGAAGGCGGAGAGGATTATCGCGTTGAGAAGATTTTCGCGGCGGA
ATCCGACGACGGGTCGGGAACGGAGAAGAAAATTGGACGAGACGAGAAAATTTCAAGCCAATCGAGACATCCTACATCGATCTTGGAGGTATTTAGCAAGAAGAATGCTG
TCAATTTCAGTTTCAGTTTCAATTTAGGTTTCAATTTCATCAAGAGCAGAATCTGCAAGGGCAAAAACGGCGACAGAAACAGCAATCTCAACTACGATCAACATCTCCGA
GAAATTGAATCTGCCGCTCGATTAACGGTGTTTGGAATCCGAGAAAATCCGAAACGACTGCTTCAGATTCCGTCCCGAGAACGGAAACTGACGACGGAAAATTCATATCA
TGAAGATGATGAAAACGGAGAAGAATTGTGGCAGAAAAGAATTCTAATGGGAGAGAAATGCAAACCTCTGAATACTTCTGTAAGTCTTCGA
Protein sequenceShow/hide protein sequence
DSLNKKKTKILEEETQATFMAAIATTIESDLAESAPASVSHFKIPPFLLKTFRKGPFDHCNDHYVEGKRNSSEIEIKKNWIRAPEKLFEVASVICKIFGGAKLSACGIGS
KVVDGEDEDDEEDRGDYCLSESEGGEDYRVEKIFAAESDDGSGTEKKIGRDEKISSQSRHPTSILEVFSKKNAVNFSFSFNLGFNFIKSRICKGKNGDRNSNLNYDQHLR
EIESAARLTVFGIRENPKRLLQIPSRERKLTTENSYHEDDENGEELWQKRILMGEKCKPLNTSVSLR