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MS000648 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000648
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPseudouridylate synthase 7-like protein isoform X1
Genome locationscaffold93:832083..832274
RNA-Seq ExpressionMS000648
SyntenyMS000648
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063414.1 uncharacterized protein E6C27_scaffold508G00510 [Cucumis melo var. makuwa]4.5e-0453.19Show/hide
Query:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKN
        ++ I    GG  SIS KT+NLI+C+EA I+V  N CGFLPA VE ++
Subjt:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKN
XP_031738083.1 uncharacterized protein LOC116402658 [Cucumis sativus]7.7e-0447.06Show/hide
Query:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKNPKFG
        FE I  H GG + I+++TLNL +C+EA IQV+ N CGF+ ++ E  + K G
Subjt:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKNPKFG
XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]2.6e-0444.07Show/hide
Query:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKNPKFGPFKISTSD
        FE I  + GGL SI+ + LNLI   +A I+V+ N CGF+PA++E  N K G   ++  D
Subjt:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKNPKFGPFKISTSD
TrEMBL top hitse value%identityAlignment
A0A5A7V878 DUF4283 domain-containing protein2.2e-0453.19Show/hide
Query:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKN
        ++ I    GG  SIS KT+NLI+C+EA I+V  N CGFLPA VE ++
Subjt:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKN
A0A5D3DYX0 Pseudouridylate synthase 7-like protein isoform X18.3e-0442.37Show/hide
Query:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKNPKFGPFKISTSD
        FE I  H  GL +IS +TLN  +  EA IQ++ N CGF+PA++E  +   G F ++  D
Subjt:  FEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKNPKFGPFKISTSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGGAAACAGATTTTTTGAAGGTATTGCAAGCCATTGTGGAGGGTTGGTCAGCATATCCTCAAAAACTCTTAATCTGATTGATTGCACTGAGGCTTGCATTCAGGTTGA
AGGGAACAAATGTGGGTTTTTACCAGCTTCAGTTGAATTTAAGAATCCAAAGTTTGGCCCCTTCAAGATCAGTACTTCGGAT
mRNA sequenceShow/hide mRNA sequence
TTTGGAAACAGATTTTTTGAAGGTATTGCAAGCCATTGTGGAGGGTTGGTCAGCATATCCTCAAAAACTCTTAATCTGATTGATTGCACTGAGGCTTGCATTCAGGTTGA
AGGGAACAAATGTGGGTTTTTACCAGCTTCAGTTGAATTTAAGAATCCAAAGTTTGGCCCCTTCAAGATCAGTACTTCGGAT
Protein sequenceShow/hide protein sequence
FGNRFFEGIASHCGGLVSISSKTLNLIDCTEACIQVEGNKCGFLPASVEFKNPKFGPFKISTSD