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MS000707 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000707
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAgglutinin domain-containing protein
Genome locationscaffold414:226568..226885
RNA-Seq ExpressionMS000707
SyntenyMS000707
Gene Ontology termsNA
InterPro domainsIPR008998 - Agglutinin domain
IPR036242 - Agglutinin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140504.1 uncharacterized protein LOC101208463 [Cucumis sativus]1.9e-2053.85Show/hide
Query:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGK-SVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWS
        +PKYFALQ ++P    P+T  +L+    H   E G+L+ +G+ S+LSP+SK ESE SES PK +HIRC  NNKYWVR+  DS +IV  A +KE++RSK S
Subjt:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGK-SVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWS

Query:  CTLF
        CTLF
Subjt:  CTLF

XP_022155409.1 uncharacterized protein LOC111022557 [Momordica charantia]6.0e-3063.11Show/hide
Query:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC
        +PK+FALQ + P    PKT  YLR VQDHE   DGFL+ SGK + SP SK  SEASES P+ +HIRC YNNKYWVRQ PDS YIV    ++E D+SKWSC
Subjt:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC

Query:  TLF
        TLF
Subjt:  TLF

XP_022157630.1 uncharacterized protein LOC111024291 [Momordica charantia]6.2e-5195.28Show/hide
Query:  VQQLPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSK
        VQQLPKYFALQRFNPSSSDPKTGAYLRCVQDHEILE GFLKVSGKSVLSPYSKMESEASESSPKHVHIR C NNKYWVRQ PDSFYIVTAAAEKEEDRSK
Subjt:  VQQLPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSK

Query:  WSCTLF
        W+CTLF
Subjt:  WSCTLF

XP_038906851.1 uncharacterized protein LOC120092742 [Benincasa hispida]1.6e-2759.22Show/hide
Query:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC
        +P++FALQ  NP S  PKT  YLR V + +  E G L  SGK+VLSP+SK ESE SE+ PK  HI+CCYNNKYWVR+  +S YI+  A +KEED+SKW+C
Subjt:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC

Query:  TLF
        TLF
Subjt:  TLF

XP_038906982.1 uncharacterized protein LOC120092830 [Benincasa hispida]1.6e-2759.22Show/hide
Query:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC
        +P++FALQ  NP S  PKT  YLR V + +  E G L  SGK+VLSP+SK ESE SE+ PK  HI+CCYNNKYWVR+  +S YI+  A +KEED+SKW+C
Subjt:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC

Query:  TLF
        TLF
Subjt:  TLF

TrEMBL top hitse value%identityAlignment
A0A0A0KFN1 Agglutinin domain-containing protein9.4e-2153.85Show/hide
Query:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGK-SVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWS
        +PKYFALQ ++P    P+T  +L+    H   E G+L+ +G+ S+LSP+SK ESE SES PK +HIRC  NNKYWVR+  DS +IV  A +KE++RSK S
Subjt:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGK-SVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWS

Query:  CTLF
        CTLF
Subjt:  CTLF

A0A6J1DQ71 uncharacterized protein LOC1110225572.9e-3063.11Show/hide
Query:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC
        +PK+FALQ + P    PKT  YLR VQDHE   DGFL+ SGK + SP SK  SEASES P+ +HIRC YNNKYWVRQ PDS YIV    ++E D+SKWSC
Subjt:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC

Query:  TLF
        TLF
Subjt:  TLF

A0A6J1DTL3 uncharacterized protein LOC111024281 isoform X11.8e-1948.54Show/hide
Query:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC
        +P+YFAL+  + ++       YLR + +++    GFL+ SG+ ++SPY+K E E S+    +VHIRCCYNNKYWVRQ   S YIV  A + +ED SKWSC
Subjt:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC

Query:  TLF
        TLF
Subjt:  TLF

A0A6J1DTM1 uncharacterized protein LOC1110242913.0e-5195.28Show/hide
Query:  VQQLPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSK
        VQQLPKYFALQRFNPSSSDPKTGAYLRCVQDHEILE GFLKVSGKSVLSPYSKMESEASESSPKHVHIR C NNKYWVRQ PDSFYIVTAAAEKEEDRSK
Subjt:  VQQLPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSK

Query:  WSCTLF
        W+CTLF
Subjt:  WSCTLF

A0A6J1DYR0 uncharacterized protein LOC111024281 isoform X21.8e-1948.54Show/hide
Query:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC
        +P+YFAL+  + ++       YLR + +++    GFL+ SG+ ++SPY+K E E S+    +VHIRCCYNNKYWVRQ   S YIV  A + +ED SKWSC
Subjt:  LPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSC

Query:  TLF
        TLF
Subjt:  TLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTACAGCAACTCCCAAAATATTTTGCTTTGCAACGATTCAACCCAAGTTCTTCAGACCCCAAAACTGGAGCATATCTGCGGTGTGTACAAGATCATGAGATTTTAGAAGA
TGGATTCCTCAAAGTCTCTGGGAAAAGTGTGCTGAGTCCTTATTCGAAGATGGAATCCGAGGCGTCCGAGTCCAGCCCCAAGCACGTGCACATAAGATGCTGTTACAACA
ATAAATACTGGGTTCGACAGTGGCCTGACTCTTTCTACATTGTCACTGCTGCAGCAGAGAAAGAAGAGGACCGATCCAAATGGAGCTGCACCTTGTTC
mRNA sequenceShow/hide mRNA sequence
GTACAGCAACTCCCAAAATATTTTGCTTTGCAACGATTCAACCCAAGTTCTTCAGACCCCAAAACTGGAGCATATCTGCGGTGTGTACAAGATCATGAGATTTTAGAAGA
TGGATTCCTCAAAGTCTCTGGGAAAAGTGTGCTGAGTCCTTATTCGAAGATGGAATCCGAGGCGTCCGAGTCCAGCCCCAAGCACGTGCACATAAGATGCTGTTACAACA
ATAAATACTGGGTTCGACAGTGGCCTGACTCTTTCTACATTGTCACTGCTGCAGCAGAGAAAGAAGAGGACCGATCCAAATGGAGCTGCACCTTGTTC
Protein sequenceShow/hide protein sequence
VQQLPKYFALQRFNPSSSDPKTGAYLRCVQDHEILEDGFLKVSGKSVLSPYSKMESEASESSPKHVHIRCCYNNKYWVRQWPDSFYIVTAAAEKEEDRSKWSCTLF