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MS000715 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000715
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold26:127274..127378
RNA-Seq ExpressionMS000715
SyntenyMS000715
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152909.1 calcium-binding protein KRP1 [Cucumis sativus]7.6e-0680Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LM+ASRY   ESLRREF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
XP_008463452.1 PREDICTED: calcium-binding protein PBP1-like [Cucumis melo]7.6e-0680Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LM+ASRY   ESLRREF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
XP_015897214.1 calcium-binding protein KRP1-like [Ziziphus jujuba]3.4e-0674.29Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LM+ SRYWL+E+L++EF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
XP_022144078.1 calcium-binding protein PBP1-like [Momordica charantia]2.5e-0994.29Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSPDLMDASRYWLQESLRREF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
XP_022985284.1 calcium-binding protein PBP1-like [Cucurbita maxima]1.5e-0682.86Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LMDASRY  Q+SLRREF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
TrEMBL top hitse value%identityAlignment
A0A0A0L2H0 EF-hand domain-containing protein3.7e-0680Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LM+ASRY   ESLRREF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
A0A5A7SII1 Calcium-binding protein PBP1-like3.7e-0680Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LM+ASRY   ESLRREF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
A0A6J1CSD5 calcium-binding protein PBP1-like1.2e-0994.29Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSPDLMDASRYWLQESLRREF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
A0A6J1JCW0 calcium-binding protein PBP1-like7.4e-0782.86Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LMDASRY  Q+SLRREF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
A0A6P4AM56 calcium-binding protein KRP1-like1.7e-0674.29Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LM+ SRYWL+E+L++EF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP14.6e-0668.57Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSPDLM+ASR  + E +  EF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
Q9LSQ6 Calcium-binding protein PBP11.8e-0565.71Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LM+ASR  + E +  EF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
Q9ZPX9 Calcium-binding protein KIC7.4e-0452.94Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRRE
        GALN  EFCVLM  LSP++M+ +  WL+++L +E
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRRE
Arabidopsis top hitse value%identityAlignment
AT2G46600.1 Calcium-binding EF-hand family protein5.3e-0552.94Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRRE
        GALN  EFCVLM  LSP++M+ +  WL+++L +E
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRRE
AT4G27280.1 Calcium-binding EF-hand family protein3.3e-0768.57Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSPDLM+ASR  + E +  EF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
AT5G54490.1 pinoid-binding protein 11.3e-0665.71Show/hide
Query:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF
        GALN MEFCVLMF LSP+LM+ASR  + E +  EF
Subjt:  GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCGCTCTCAATTGGATGGAATTTTGTGTTCTTATGTTCACATTAAGCCCCGATTTGATGGATGCGTCTCGCTACTGGCTCCAAGAAAGCCTCCGGCGAGAATTT
mRNA sequenceShow/hide mRNA sequence
GGCGCTCTCAATTGGATGGAATTTTGTGTTCTTATGTTCACATTAAGCCCCGATTTGATGGATGCGTCTCGCTACTGGCTCCAAGAAAGCCTCCGGCGAGAATTT
Protein sequenceShow/hide protein sequence
GALNWMEFCVLMFTLSPDLMDASRYWLQESLRREF