; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000716 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000716
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalcium-binding protein PBP1-like
Genome locationscaffold26:130511..130867
RNA-Seq ExpressionMS000716
SyntenyMS000716
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152909.1 calcium-binding protein KRP1 [Cucumis sativus]2.4e-5187.29Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        M  KNQ PQS+SGF+DWLP MA  LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSD+ELRGML EGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREF
        +LM+ASRY   ESLRREF
Subjt:  DLMDASRYWLQESLRREF

XP_022144078.1 calcium-binding protein PBP1-like [Momordica charantia]2.6e-61100Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREFS
        DLMDASRYWLQESLRREFS
Subjt:  DLMDASRYWLQESLRREFS

XP_022932158.1 calcium-binding protein PBP1-like [Cucurbita moschata]7.7e-5086.44Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        MA  NQ PQS+SGFEDWLP MA KLGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD SDEELRGML EGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREF
        +LMDASRY  Q+SLR +F
Subjt:  DLMDASRYWLQESLRREF

XP_022985284.1 calcium-binding protein PBP1-like [Cucurbita maxima]7.0e-5188.14Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        MA  NQ PQS+SGFEDWLP MA KLGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD SDEELRGML EGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREF
        +LMDASRY  Q+SLRREF
Subjt:  DLMDASRYWLQESLRREF

XP_038905287.1 calcium-binding protein KRP1-like [Benincasa hispida]1.2e-5086.44Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        MA+KNQ PQS+S FEDWLPAMA+ LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA LGLGDL+DEELRGML EGDFDGDGALN+MEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREF
         LM+ASRY   E LRREF
Subjt:  DLMDASRYWLQESLRREF

TrEMBL top hitse value%identityAlignment
A0A0A0L2H0 EF-hand domain-containing protein1.2e-5187.29Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        M  KNQ PQS+SGF+DWLP MA  LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSD+ELRGML EGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREF
        +LM+ASRY   ESLRREF
Subjt:  DLMDASRYWLQESLRREF

A0A5A7SII1 Calcium-binding protein PBP1-like4.9e-5084.75Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        M + N  PQS+SGF+DWLP MA KLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSD+ELRGML EGD +GDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREF
        +LM+ASRY   ESLRREF
Subjt:  DLMDASRYWLQESLRREF

A0A6J1CSD5 calcium-binding protein PBP1-like1.2e-61100Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREFS
        DLMDASRYWLQESLRREFS
Subjt:  DLMDASRYWLQESLRREFS

A0A6J1F0V4 calcium-binding protein PBP1-like3.7e-5086.44Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        MA  NQ PQS+SGFEDWLP MA KLGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD SDEELRGML EGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREF
        +LMDASRY  Q+SLR +F
Subjt:  DLMDASRYWLQESLRREF

A0A6J1JCW0 calcium-binding protein PBP1-like3.4e-5188.14Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP
        MA  NQ PQS+SGFEDWLP MA KLGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD SDEELRGML EGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSP

Query:  DLMDASRYWLQESLRREF
        +LMDASRY  Q+SLRREF
Subjt:  DLMDASRYWLQESLRREF

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP12.9e-3975.23Show/hide
Query:  QSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-LGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYW
        Q  F D+LP MA  LGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGLGDL+DE++R M+ EGDFD DGALNQMEFCVLMFRLSPDLM+ASR  
Subjt:  QSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-LGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYW

Query:  LQESLRREF
        + E +  EF
Subjt:  LQESLRREF

Q2TBN3 Centrin-26.2e-1043.02Show/hide
Query:  FEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLS
        F D+L  M  K+  +    E+   F L  D E G I+F++LKR A  LG  +LSDEEL+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP13.9e-3665.52Show/hide
Query:  KNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDL
        +NQ PQ    F+D+ P MA KLGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGLGDL+D+++R M+ EGDFD DGALNQMEFCVLMFRLSP+L
Subjt:  KNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDL

Query:  MDASRYWLQESLRREF
        M+ASR  + E +  EF
Subjt:  MDASRYWLQESLRREF

Q9R1K9 Centrin-21.4e-0941.86Show/hide
Query:  FEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLS
        F D+L  M  K+  +    E+   F L  D E G I+F++LKR A  LG  +L+DEEL+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLS

Q9ZPX9 Calcium-binding protein KIC3.6e-2651.4Show/hide
Query:  QSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYWL
        ++ +ED LP MA K+  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S E+ +GM+ EGD DGDGALNQ EFCVLM RLSP++M+ +  WL
Subjt:  QSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYWL

Query:  QESLRRE
        +++L +E
Subjt:  QESLRRE

Arabidopsis top hitse value%identityAlignment
AT2G46600.1 Calcium-binding EF-hand family protein2.6e-2751.4Show/hide
Query:  QSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYWL
        ++ +ED LP MA K+  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  +S E+ +GM+ EGD DGDGALNQ EFCVLM RLSP++M+ +  WL
Subjt:  QSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYWL

Query:  QESLRRE
        +++L +E
Subjt:  QESLRRE

AT4G27280.1 Calcium-binding EF-hand family protein2.0e-4075.23Show/hide
Query:  QSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-LGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYW
        Q  F D+LP MA  LGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGLGDL+DE++R M+ EGDFD DGALNQMEFCVLMFRLSPDLM+ASR  
Subjt:  QSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-LGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYW

Query:  LQESLRREF
        + E +  EF
Subjt:  LQESLRREF

AT4G37010.1 centrin 24.7e-0529.29Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLS
        MA  +++      F++++  M  K G    I EL   F ++     G I+   +K  A  LG  + +D ++  M+ E D D DG +N  EF  +M R S
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLS

AT4G37010.2 centrin 24.7e-0529.29Show/hide
Query:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLS
        MA  +++      F++++  M  K G    I EL   F ++     G I+   +K  A  LG  + +D ++  M+ E D D DG +N  EF  +M R S
Subjt:  MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLS

AT5G54490.1 pinoid-binding protein 12.7e-3765.52Show/hide
Query:  KNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDL
        +NQ PQ    F+D+ P MA KLGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGLGDL+D+++R M+ EGDFD DGALNQMEFCVLMFRLSP+L
Subjt:  KNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDL

Query:  MDASRYWLQESLRREF
        M+ASR  + E +  EF
Subjt:  MDASRYWLQESLRREF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCGAAGAACCAAAGCCCCCAATCTCAATCCGGATTCGAAGATTGGCTGCCGGCGATGGCCTGGAAGCTCGGCGGCGAGGGGCTGATCGGAGAGCTCTGCAACGG
ATTCAACCTTCTGATGGACAGAGAGAAAGGAGTGATCAATTTCGAGAGCTTGAAGCGGAATGCAGCGGCGCTAGGGCTGGGGGATCTGAGCGACGAGGAGCTCAGGGGGA
TGTTGACGGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGCCCCGATTTGATGGATGCGTCTCGCTACTGGCTC
CAAGAAAGTCTCCGGCGAGAATTCTCT
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCGAAGAACCAAAGCCCCCAATCTCAATCCGGATTCGAAGATTGGCTGCCGGCGATGGCCTGGAAGCTCGGCGGCGAGGGGCTGATCGGAGAGCTCTGCAACGG
ATTCAACCTTCTGATGGACAGAGAGAAAGGAGTGATCAATTTCGAGAGCTTGAAGCGGAATGCAGCGGCGCTAGGGCTGGGGGATCTGAGCGACGAGGAGCTCAGGGGGA
TGTTGACGGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGCCCCGATTTGATGGATGCGTCTCGCTACTGGCTC
CAAGAAAGTCTCCGGCGAGAATTCTCT
Protein sequenceShow/hide protein sequence
MAAKNQSPQSQSGFEDWLPAMAWKLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLSDEELRGMLTEGDFDGDGALNQMEFCVLMFRLSPDLMDASRYWL
QESLRREFS