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MS000718 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000718
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationscaffold26:158435..158641
RNA-Seq ExpressionMS000718
SyntenyMS000718
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]1.2e-1050Show/hide
Query:  EERNRIITGWSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELM
        E  N +   WS PPTN WK+NTDA+W+E   V G+GWI+   RGE +LA  C+ R  + I  LELM
Subjt:  EERNRIITGWSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELM
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.5e-0850Show/hide
Query:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
        W PP +N WK+NT+AAW    +  G+GWI+R  +GE I A C   RA R+I +LE+MA
Subjt:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]5.0e-0950Show/hide
Query:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
        W PP +N WK+NTDAAW    + +G+GWI+R  +GE I   C   RA R+I +LE+MA
Subjt:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]5.0e-0950Show/hide
Query:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
        W PP +N WK+NTDAAW    + +G+GWI+R  +GE I   C   RA R+I +LE+MA
Subjt:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]1.5e-0850Show/hide
Query:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
        W PP +N WK+NTDAAW    +  G+GWI+R  +GE I A C   R  R+I +LE+MA
Subjt:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134127.0e-0950Show/hide
Query:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
        W PP +N WK+NT+AAW    +  G+GWI+R  +GE I A C   RA R+I +LE+MA
Subjt:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
A0A6J1CQG0 uncharacterized protein LOC1110132165.8e-1150Show/hide
Query:  EERNRIITGWSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELM
        E  N +   WS PPTN WK+NTDA+W+E   V G+GWI+   RGE +LA  C+ R  + I  LELM
Subjt:  EERNRIITGWSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELM
A0A6J1DL64 uncharacterized protein LOC111022134 isoform X12.4e-0950Show/hide
Query:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
        W PP +N WK+NTDAAW    + +G+GWI+R  +GE I   C   RA R+I +LE+MA
Subjt:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X22.4e-0950Show/hide
Query:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
        W PP +N WK+NTDAAW    + +G+GWI+R  +GE I   C   RA R+I +LE+MA
Subjt:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
A0A6J1DSV1 uncharacterized protein LOC1110236087.0e-0950Show/hide
Query:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
        W PP +N WK+NTDAAW    +  G+GWI+R  +GE I A C   R  R+I +LE+MA
Subjt:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.8e-0438.18Show/hide
Query:  ERNRIITGWSPPPTNFWKINTDAAWNEHHSVEGLGWIVRS------WRGEAILAR
        ERN +   W  PP  + K NTDA W   +   G+GWI+R+      W G   L R
Subjt:  ERNRIITGWSPPPTNFWKINTDAAWNEHHSVEGLGWIVRS------WRGEAILAR
AT4G29090.1 Ribonuclease H-like superfamily protein9.4e-0647.22Show/hide
Query:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGE
        W PPP  + K NTDA WN  +   G+GW++R+ +GE
Subjt:  WSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGE
AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.0e-0547.5Show/hide
Query:  TGWSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAI
        T WSPP  +  K N DA+ +E ++V GLGWI+R+ +G  I
Subjt:  TGWSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAAATGAGGAAAGAAACAGAATAATCACTGGCTGGAGTCCTCCGCCTACGAATTTCTGGAAAATCAACACTGATGCTGCCTGGAATGAACATCATAGTGTTGAAGGCTT
GGGTTGGATCGTGCGAAGTTGGAGAGGTGAAGCGATTCTTGCAAGATGTTGTGAAACAAGAGCTAACAGATCAATAAAATTTCTTGAATTAATGGCG
mRNA sequenceShow/hide mRNA sequence
TCAAATGAGGAAAGAAACAGAATAATCACTGGCTGGAGTCCTCCGCCTACGAATTTCTGGAAAATCAACACTGATGCTGCCTGGAATGAACATCATAGTGTTGAAGGCTT
GGGTTGGATCGTGCGAAGTTGGAGAGGTGAAGCGATTCTTGCAAGATGTTGTGAAACAAGAGCTAACAGATCAATAAAATTTCTTGAATTAATGGCG
Protein sequenceShow/hide protein sequence
SNEERNRIITGWSPPPTNFWKINTDAAWNEHHSVEGLGWIVRSWRGEAILARCCETRANRSIKFLELMA