CuGenDBv2

Gene ID	MS000725
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WD repeat-containing protein 25
Genome location	scaffold26:309807..311514
RNA-Seq Expression	MS000725
Synteny	MS000725
Gene Ontology terms	GO:0005515 - protein binding (molecular function) GO:0008753 - NADPH dehydrogenase (quinone) activity (molecular function) GO:0010181 - FMN binding (molecular function) GO:0050136 - NADH dehydrogenase (quinone) activity (molecular function)
InterPro domains	IPR001680 - WD40 repeat IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR019775 - WD40 repeat, conserved site IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6600751.1 WD repeat-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-157

85.81

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MP+RMSV+LDCHTKAVNA+QWSPS+AHLLAS AMD+TIC+WN+W+TEQKLAFKS+IHNAAVK+V+WSQ+GLSILSCGYD +SRLIDVE GTEVG FKEDQ
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
        GVAVVKFHPNNP+LFLSGGLKGSLRMWD RIGKVVNKYNRRLGPILDVEFTP+ NQFISSSDVS+SNSSESS+IVWD+TRE      VYMEAYTCPCVRC
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HPFDPVFIAQSNGDY+AIFSLNPPFKLDKYKRY SH VSGFPIKCNFSLD KQIISGSSDGS+YFYDYKSSLL+ K KA E AC DVA+HP LPNVIASC
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SWNGNI+VFQ
Subjt:  SWNGNIAVFQ

XP_011650540.1 WD repeat-containing protein 25 isoform X1 [Cucumis sativus]

6.3e-157

85.81

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MP+RMSV LDCH KAVN++QWSPS+AHLLASAAMDHTIC+WNVW+T QKLAFKSN HNAAVK+VQWSQ+GLS+LSCGYD ASRLIDVEKGTEVG FKEDQ
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
        GVAVVKFHPNNPNLFLSGGLKGSLRMWD RIGK+VNKYNRRLGPILDVEFTP+SNQFISSSDVS SNSSESSII+WD+TRE      VYMEAYTCP VRC
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HP DP FIAQSNG Y+AIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLD KQIISGSSDGS+YFYDYKSSLL+ K KA E ACID+A+HP LPNVIASC
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SWNG I+VFQ
Subjt:  SWNGNIAVFQ

XP_022142879.1 WD repeat-containing protein 25 [Momordica charantia]

2.1e-176

97.74

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
        GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE      VYMEAYTCPCVRC
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVA+HPILPNVIASC
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SWNGNIAVFQ
Subjt:  SWNGNIAVFQ

XP_022941667.1 WD repeat-containing protein 25 [Cucurbita moschata]

4.4e-158

86.13

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MP+RMSV+LDCHTKAVNA+QWSPS+AHLLASAAMD+TIC+WN+W+TEQKLAFKS+IHNAAVK+V+WSQ+GLSILSCGYD +SRLIDVEKGTEVG FKEDQ
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
        GVAVVKFHPNNP++FLSGGLKGSLRMWD RIGKVVNKYNRRLGPILDVEFTP+ NQFISSSDVS+SNSSESS+IVWD+TRE      VYMEAYTCPCVRC
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HPFDPVFIAQSNGDY+AIFSLNPPFKLDKYKRY SH VSGFPIKCNFSLD KQIISGSSDGS+YFYDYKSSLL+ K KA E AC DVA+HP LPNVIASC
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SWNGNI+VFQ
Subjt:  SWNGNIAVFQ

XP_023526021.1 WD repeat-containing protein 25 [Cucurbita pepo subsp. pepo]

7.5e-158

85.81

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MP+RMSV+LDCHTKAVNA+QWSPS+AHLLASAAMD+TIC+WN+W+TEQKLAFKS+IHNAAVK+V+WSQ+GLS+LSCGYD +SRLIDVEKGTEVG FKEDQ
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
        GVAVVKFHPNNP+LFLSGGLKGSLRMWD RIGKVVNKYNRRLGPILDVEFTP+ NQFISSSDVS+SNSSESS+IVWD+TRE      VYMEAYTCPCVRC
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HPFDPVFIAQSNGDY+AIFSLNPPFKLDKYKRY SH VSGFPIKCNFSLD KQIISGSSDGS+YFYDYKSSLL+ K KA E AC DVA+HP LPNVIASC
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SW+GNI+VFQ
Subjt:  SWNGNIAVFQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L568 WD_REPEATS_REGION domain-containing protein

2.0e-140

86.28

Show/hide

Query:  MDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQGVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGK
        MDHTIC+WNVW+T QKLAFKSN HNAAVK+VQWSQ+GLS+LSCGYD ASRLIDVEKGTEVG FKEDQGVAVVKFHPNNPNLFLSGGLKGSLRMWD RIGK
Subjt:  MDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQGVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGK

Query:  VVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRY
        +VNKYNRRLGPILDVEFTP+SNQFISSSDVS SNSSESSII+WD+TRE      VYMEAYTCP VRCHP DP FIAQSNG Y+AIFSLNPPFKLDKYKRY
Subjt:  VVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRY

Query:  ESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASCSWNGNIAVFQ
        ESHGVSGFPIKCNFSLD KQIISGSSDGS+YFYDYKSSLL+ K KA E ACID+A+HP LPNVIASCSWNG I+VFQ
Subjt:  ESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASCSWNGNIAVFQ

A0A1S4DZ03 WD repeat-containing protein 25 isoform X1

3.1e-157

85.81

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MP+RMSVTLDCH KAVN++QWSPS+AHLLASAAMDHTIC+WNVW+T QKLA KS+ HNAAVK+VQWSQ+GLS+LSCGYD ASRLIDVEKGTEVG FKEDQ
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
        GVAVVKFHPNNPNLFLSGGLKGSLRMWD RIGK+VNKYNRRLG ILD+EFTP+SNQFISSSDVS SNSSESSIIVWD+TRE      VYMEAYTCP VRC
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HPFDP FIAQSNGDY+AIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLD KQIISGSSDGS+YFYDYKSSLL+ K KA E ACID+A+HP LPNVIASC
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SWNG I+VFQ
Subjt:  SWNGNIAVFQ

A0A6J1CMQ5 WD repeat-containing protein 25

1.0e-176

97.74

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
        GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE      VYMEAYTCPCVRC
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVA+HPILPNVIASC
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SWNGNIAVFQ
Subjt:  SWNGNIAVFQ

A0A6J1FN47 WD repeat-containing protein 25

2.1e-158

86.13

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MP+RMSV+LDCHTKAVNA+QWSPS+AHLLASAAMD+TIC+WN+W+TEQKLAFKS+IHNAAVK+V+WSQ+GLSILSCGYD +SRLIDVEKGTEVG FKEDQ
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
        GVAVVKFHPNNP++FLSGGLKGSLRMWD RIGKVVNKYNRRLGPILDVEFTP+ NQFISSSDVS+SNSSESS+IVWD+TRE      VYMEAYTCPCVRC
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HPFDPVFIAQSNGDY+AIFSLNPPFKLDKYKRY SH VSGFPIKCNFSLD KQIISGSSDGS+YFYDYKSSLL+ K KA E AC DVA+HP LPNVIASC
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SWNGNI+VFQ
Subjt:  SWNGNIAVFQ

A0A6J1JQD9 WD repeat-containing protein 25

6.8e-157

85.16

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MP+RMSV+LDCHTKAVNA+QWSPS+AHLLASAAMD+TIC+WN+W+TEQKLAFKS+IHNAAVK+V+WSQ+GLSILSCGYD +SRLIDVEKGTE+G FKEDQ
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
        GVAVVKFHPN+P+LFLSGG+KGSLRMWD RIGKVVNKYNRRLGPILDVEFTP+ NQFISSSDVS+SNSSESS+IVWD+TRE      VYMEAYTCPCVRC
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HPFDPVFIAQSNGDY+AIFSLNPPFKLDKYKRY SH VSGFPIKC+FSLD KQIISGSSDGS+YFYDYKSSLL+ K KA E AC DVA+HP LPNVIASC
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SWNGNI VFQ
Subjt:  SWNGNIAVFQ

SwissProt top hits

e value

%identity

Alignment

E9Q349 WD repeat-containing protein 25

1.6e-62

36.98

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSP--SNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKE
        +P+++   L  H   VN++QW P    +H+L SA+MD T  VWN  ++   L   S +H+ AV+  +WS  G  ILS G+D A  L D+E GT+V + + 
Subjt:  MPERMSVTLDCHTKAVNALQWSP--SNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKE

Query:  DQGVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWD------ITREVYMEAYTCPCV
        D  V  +KFHP + N+FL GG    ++ WD R GKVV  Y   +   LD+ F    ++F+SS+D S  +S++ +II WD      I+ +++ E YTCP +
Subjt:  DQGVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWD------ITREVYMEAYTCPCV

Query:  RCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIA
          HP +PVF+AQ+NG+Y+A+FS   P+++ + +RYE H V G+ + C  S     +++GS+DG V  + ++++      +    AC+    HP+LP+V+ 
Subjt:  RCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIA

Query:  SCSWNGNIAVF
        +CSW G+I ++
Subjt:  SCSWNGNIAVF

O43071 Pre-mRNA-processing factor 17

1.9e-31

27.39

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        +P++   T   HTK ++ L++ P + HLL S +MD+ I +W V++ ++ L      H   ++++ +SQ+G S LS  +D+  +L D E G  +  F  D+
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFH--PNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYME------AYTCPCV
            VKF   P+ PN FL+G     +  +D R   +V  Y+  LG I  + F  +  +F+++SD       +SS+  W+    V ++       ++ P V
Subjt:  GVAVVKFH--PNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYME------AYTCPCV

Query:  RCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIA
           P       QS  + + ++S    ++ +K K ++ +  SG+ ++  FS D + + SG S G+  F+D+K+  L+ K  A       +A HP   + +A
Subjt:  RCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIA

Query:  SCS
        + S
Subjt:  SCS

O60508 Pre-mRNA-processing factor 17

5.2e-37

29.84

Show/hide

Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        +P++       HTK V+A++  P + HLL S +MD  I +W V+  E++       H+ AV+++ ++  G   LS  YDR  +L D E G  +  F   +
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHP--NNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYMEAYTCPCVRCHPFD
            VKF+P  +  NLF++G     +  WD R G++V +Y+R LG +  + F   + +F+S+SD  +    E  I V D         ++ P V   P  
Subjt:  GVAVVKFHP--NNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYMEAYTCPCVRCHPFD

Query:  PVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASCSWNG
             QS  + + IF     F+L+K K ++ H V+G+  + +FS D   +ISG  +G +  +D+K++ L  + KA +  CI    HP   + + +C W+G
Subjt:  PVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASCSWNG

Query:  NIAVF
         I ++
Subjt:  NIAVF

Q64LD2 WD repeat-containing protein 25

6.1e-62

35.69

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Query:  MPERMSVTLDCHTKAVNALQWSP--SNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKE
        +P ++   L  H   VN +QW P  S +H+L S +MD T  VWN  ++   L   S +H  AV+  +W+  G  ILS G+D A  L D+E GT++ + + 
Subjt:  MPERMSVTLDCHTKAVNALQWSP--SNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKE

Query:  DQGVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWD------ITREVYMEAYTCPCV
        D  +  +KFHP + N+FL GG    ++ WD R GKV+  Y   +   LD+ F    ++F+SS+D S  +S++ +II WD      I+ +++ E +TCP +
Subjt:  DQGVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWD------ITREVYMEAYTCPCV

Query:  RCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIA
          HP +PVF+AQ+NG+Y+A+FS   P+++ + +RYE H V G+ + C  S     +++GS+DG V  Y ++++      +    AC+    HP+LP+V+A
Subjt:  RCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIA

Query:  SCSWNGNIAVF
        +CSW G++ ++
Subjt:  SCSWNGNIAVF

Q9DC48 Pre-mRNA-processing factor 17

5.2e-37

29.84

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Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        +P++       HTK V+A++  P + HLL S +MD  I +W V+   + L      H+ AV+++ ++  G   LS  YDR  +L D E G  +  F   +
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHP--NNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYMEAYTCPCVRCHPFD
            VKF+P  +  NLF++G     +  WD R G++V +Y+R LG +  + F   + +F+S+SD  +    E  I V D         ++ P V   P  
Subjt:  GVAVVKFHP--NNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYMEAYTCPCVRCHPFD

Query:  PVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASCSWNG
             QS  + + IF     F+L+K K ++ H V+G+  + +FS D   +ISG  +G +  +D+K++ L  + KA +  CI    HP   + + +C W+G
Subjt:  PVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASCSWNG

Query:  NIAVF
         I ++
Subjt:  NIAVF

Arabidopsis top hits

e value

%identity

Alignment

AT1G10580.1 Transducin/WD40 repeat-like superfamily protein

3.5e-44

30.52

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Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        +P+R+  T   HTK V+A+++ P   HLL SA MD  + +W+V+N+ + +      H  AV+++ +S +G   L+ GYD+  +  D E G  + TF   +
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNN--PNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYME------AYTCPCV
           VVK +P++   N+ L+G     +  WD   G+V  +Y++ LG +  + F  ++ +F++SSD       + S+ VW+    V ++       ++ P +
Subjt:  GVAVVKFHPNN--PNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYME------AYTCPCV

Query:  RCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIA
          HP      AQS  + + I+S    F+L+K KR+  H V+G+  + NFS D + ++SG  +G  +F+D+KS  + R  K     CI    HP+  + +A
Subjt:  RCHPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIA

Query:  SCSWNGNI
        +C W+G I
Subjt:  SCSWNGNI

AT1G11160.1 Transducin/WD40 repeat-like superfamily protein

4.6e-12

23.83

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Query:  HTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFK-EDQGVAVVKFHPN
        H+  VN L      + LL +   D+ + +W++  T   ++     H + V +V ++ E + +L+       +L D+E+   V  F       + V+FHP 
Subjt:  HTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFK-EDQGVAVVKFHPN

Query:  NPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYMEAYTC--PCVRCHPFDPV--FIAQSN
              SG    +LR+WDTR    +  Y      I  +EF+P     +       S   ++ + VWD+T    +  + C    +R   F P+   +A  +
Subjt:  NPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYMEAYTC--PCVRCHPFDPV--FIAQSN

Query:  GDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDG-SVYFYD
         D    F     F+L    R E+ GV        F  D + +  G  DG  VY ++
Subjt:  GDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDG-SVYFYD

AT1G61210.1 Transducin/WD40 repeat-like superfamily protein

5.6e-10

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Query:  HTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFK-EDQGVAVVKFHPN
        HT AV+++ +  +   +LA A+    I +W+V   +   AF    H +    V++   G  + S   D   ++ D+ K   + T+K   +G++ ++F P+
Subjt:  HTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFK-EDQGVAVVKFHPN

Query:  NPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDI
             +SGGL   +++WD   GK+++++    GPI  ++F  H  +F+      A+ S++ ++  WD+
Subjt:  NPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDI

AT5G54520.1 Transducin/WD40 repeat-like superfamily protein

3.1e-117

62.58

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Query:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ
        MP RMS++L  HTKAV A+ WS S+ HLLASA +D  + VWNVW+ ++K       HNA VK+V+WS++GLS+LSCGYD  SRL DVE+G E  +FKED+
Subjt:  MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQ

Query:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC
         V VVKFHP+N N+FLSGG KGSLR+WD R  K V++Y R LGPILDVEF     QFISSSDVS  N SE+++IVWDI+RE      VY+EAYTCPC++ 
Subjt:  GVAVVKFHPNNPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITRE------VYMEAYTCPCVRC

Query:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC
        HP DPVFIAQS+G+Y AIFS NPPFKL+KYKR+E H V+GFPIKCNFS D + + SGSSDGSVY YDYKS+ L++K KA+E  C++V+ HP+LPNV+A+C
Subjt:  HPFDPVFIAQSNGDYVAIFSLNPPFKLDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASC

Query:  SWNGNIAVFQ
        SWNG ++VF+
Subjt:  SWNGNIAVFQ

AT5G67320.1 WD-40 repeat family protein

6.6e-11

22.27

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Query:  TLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAF------------KSNI---------------------------HNAAVKNVQWSQ
        TL  H   + +L+W+    +LL + ++D T  VW+V   E K  F            ++N+                           H   V  V+W  
Subjt:  TLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAF------------KSNI---------------------------HNAAVKNVQWSQ

Query:  EGLSILSCGYDRASRLIDVEKGTEVGTFKE-DQGVAVVKFHP-----NNPNLFL---SGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFIS
         G  + SC  D  +++ ++++ T V   +E  + +  +++ P     NNPN  L   S     ++++WD  +GK++  +N    P+  + F+P       
Subjt:  EGLSILSCGYDRASRLIDVEKGTEVGTFKE-DQGVAVVKFHP-----NNPNLFL---SGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFIS

Query:  SSDVSASNSSESSIIVWDITREVYMEAYT
        + +  AS S + SI +W I     ++ YT
Subjt:  SSDVSASNSSESSIIVWDITREVYMEAYT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCTGAAAGGATGTCTGTAACTCTTGATTGCCATACAAAAGCTGTCAATGCGCTTCAATGGTCGCCAAGTAATGCTCATCTCCTTGCTTCTGCTGCTATGGATCACAC
AATCTGCGTATGGAATGTATGGAACACAGAGCAGAAGCTAGCATTCAAGTCAAACATTCACAATGCTGCAGTTAAAAATGTTCAATGGTCACAAGAAGGATTGTCCATTC
TTTCTTGTGGATATGATCGTGCTTCAAGATTGATTGATGTTGAGAAGGGGACAGAAGTTGGAACATTTAAAGAGGATCAAGGTGTTGCAGTTGTGAAGTTCCATCCTAAC
AACCCAAATCTCTTCCTTTCCGGTGGACTAAAAGGCAGCCTCCGAATGTGGGACACGAGAATTGGAAAAGTGGTTAACAAATACAACCGGCGTCTTGGTCCAATCCTTGA
TGTCGAATTCACCCCCCATAGCAACCAATTCATCTCTTCTAGTGATGTTTCTGCAAGCAATAGCAGTGAGAGTTCTATAATTGTTTGGGACATCACCAGAGAAGTTTATA
TGGAAGCCTACACTTGCCCATGCGTGAGATGCCACCCTTTTGATCCAGTTTTTATCGCCCAATCCAACGGAGATTATGTTGCAATCTTCTCACTAAACCCTCCTTTCAAG
CTAGACAAATACAAGAGGTATGAAAGTCATGGAGTCTCAGGCTTTCCAATAAAATGTAACTTCAGCCTGGATACCAAGCAGATCATATCTGGTTCTTCAGATGGTTCTGT
ATATTTTTACGATTATAAATCATCCTTGCTTGTACGTAAACAAAAAGCATTTGAGCATGCTTGCATAGACGTTGCTGTCCACCCGATCTTGCCTAATGTAATCGCTTCGT
GCAGTTGGAATGGAAATATTGCAGTGTTCCAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPERMSVTLDCHTKAVNALQWSPSNAHLLASAAMDHTICVWNVWNTEQKLAFKSNIHNAAVKNVQWSQEGLSILSCGYDRASRLIDVEKGTEVGTFKEDQGVAVVKFHPN
NPNLFLSGGLKGSLRMWDTRIGKVVNKYNRRLGPILDVEFTPHSNQFISSSDVSASNSSESSIIVWDITREVYMEAYTCPCVRCHPFDPVFIAQSNGDYVAIFSLNPPFK
LDKYKRYESHGVSGFPIKCNFSLDTKQIISGSSDGSVYFYDYKSSLLVRKQKAFEHACIDVAVHPILPNVIASCSWNGNIAVFQ

MS000725 (gene) of Bitter gourd (TR) v1 genome