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MS000751 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000751
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCYSTM domain-containing protein
Genome locationscaffold1574:198451..198742
RNA-Seq ExpressionMS000751
SyntenyMS000751
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3953656.1 hypothetical protein CMV_020922 [Castanea mollissima]1.0e-2182.26Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPPSTAPA Y APPPAGYPT+DG  +SQ PP P ETKSRG+GFWKGCCAA+CCCCVLDACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

KAF3972548.1 hypothetical protein CMV_003960 [Castanea mollissima]3.5e-2283.87Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPPSTAPA Y APPPAGYPT+DG  +SQ PP P ETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

KAG6591814.1 hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia]9.0e-2693.55Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPPST P SYAAPPPAGYPTRDGGDFSQP PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

XP_022137938.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]5.6e-28100Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

XP_031739667.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus]6.7e-2185.71Show/hide
Query:  YPPP-STAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPP ST P SY+APPPAGYPTR+GGDFS   PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  YPPP-STAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0L4C6 CYSTM domain-containing protein3.2e-2185.71Show/hide
Query:  YPPP-STAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPP ST P SY+APPPAGYPTR+GGDFS   PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  YPPP-STAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

A0A6J1CBQ4 cysteine-rich and transmembrane domain-containing protein WIH2-like2.7e-28100Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

A0A7N2LG73 CYSTM domain-containing protein3.8e-2282.26Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPPSTAPA Y APPPAGYPT+DG  +SQ PP P ETKSRGDGFWKGCCAA+CCCCV+DACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

A0A7N2LI27 CYSTM domain-containing protein9.4e-2180.65Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPPSTAPA Y APPPAGYPT+DG  + Q  P P ETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

A0A7N2R3F7 CYSTM domain-containing protein2.5e-2180.65Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YPPPST PA Y APPPAGYPT+DG  + Q PP P ETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

SwissProt top hitse value%identityAlignment
Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH27.7e-0438.89Show/hide
Query:  YPPPSTAPASYAAP--PPAGYPTRDGGDFSQPPPVPA--------ETKSRGDGFWKGCCAAICCCCVLDACF
        YPP    P  Y     PP GYP +       PPP           + +    GF +GC AA+CCCC+LDACF
Subjt:  YPPPSTAPASYAAP--PPAGYPTRDGGDFSQPPPVPA--------ETKSRGDGFWKGCCAAICCCCVLDACF

Arabidopsis top hitse value%identityAlignment
AT2G32190.1 unknown protein3.2e-1359.68Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YP P  +   Y  PPP GYPT    D S     P ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

AT2G32210.1 unknown protein1.2e-1259.68Show/hide
Query:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        YP P  +   Y APPP GYPT    D S       ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

AT3G22235.1 BEST Arabidopsis thaliana protein match is: pathogen and circadian controlled 1 (TAIR:AT3G22231.1)4.3e-1058.06Show/hide
Query:  PPSTAPASYAAPPPAGYPTRDG--GDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        P  T+   Y +PPP GYPTRD   GD   PP    ET S+G    +GCCAAICCCCVLDACF
Subjt:  PPSTAPASYAAPPPAGYPTRDG--GDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

AT3G22235.2 FUNCTIONS IN: molecular_function unknown4.3e-1058.06Show/hide
Query:  PPSTAPASYAAPPPAGYPTRDG--GDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        P  T+   Y +PPP GYPTRD   GD   PP    ET S+G    +GCCAAICCCCVLDACF
Subjt:  PPSTAPASYAAPPPAGYPTRDG--GDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF

AT3G22240.1 unknown protein1.1e-1667.74Show/hide
Query:  PPSTAPASYAAPPPAGYPTRDG--GDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF
        P  T+   Y +PPP GYPTRD   GD   PP    ETKS+GDGFWKGCCAAICCCCVLDACF
Subjt:  PPSTAPASYAAPPPAGYPTRDG--GDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATCCTCCGCCCTCCACCGCGCCGGCCTCTTATGCAGCCCCGCCGCCGGCGGGTTATCCGACCAGAGACGGCGGCGATTTTTCCCAACCCCCTCCTGTTCCTGCTGAAAC
CAAGTCCAGAGGCGACGGCTTCTGGAAAGGCTGTTGTGCTGCGATATGCTGCTGCTGTGTATTGGACGCATGCTTC
mRNA sequenceShow/hide mRNA sequence
TATCCTCCGCCCTCCACCGCGCCGGCCTCTTATGCAGCCCCGCCGCCGGCGGGTTATCCGACCAGAGACGGCGGCGATTTTTCCCAACCCCCTCCTGTTCCTGCTGAAAC
CAAGTCCAGAGGCGACGGCTTCTGGAAAGGCTGTTGTGCTGCGATATGCTGCTGCTGTGTATTGGACGCATGCTTC
Protein sequenceShow/hide protein sequence
YPPPSTAPASYAAPPPAGYPTRDGGDFSQPPPVPAETKSRGDGFWKGCCAAICCCCVLDACF