; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000752 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000752
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L27
Genome locationscaffold1574:203057..203461
RNA-Seq ExpressionMS000752
SyntenyMS000752
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001141 - Ribosomal protein L27e
IPR005824 - KOW
IPR008991 - Translation protein SH3-like domain superfamily
IPR018262 - Ribosomal protein L27e, conserved site
IPR038655 - Ribosomal protein L27e superfamily
IPR041991 - Eukaryotic Ribosomal Protein L27, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143316.1 60S ribosomal protein L27-like [Momordica charantia]5.4e-6899.26Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPS+VIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

XP_022940098.1 60S ribosomal protein L27-3-like [Cucurbita moschata]1.3e-6493.33Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSK +KVAA+KEIKKR+E+RFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

XP_022981139.1 60S ribosomal protein L27-like [Cucurbita maxima]1.5e-6594.07Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSKG+KVAAAKEIKKR+E+RFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

XP_023523697.1 60S ribosomal protein L27-like [Cucurbita pepo subsp. pepo]4.3e-6593.33Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSKG+KV AAKEIKKR+E+RFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

XP_038899503.1 60S ribosomal protein L27-3-like [Benincasa hispida]1.6e-6493.33Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFD+GTRDRPYG+CLVAG+ KYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSKG+KVAA+KEIKKR E+RFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

TrEMBL top hitse value%identityAlignment
A0A1S3CNL3 60S ribosomal protein L274.4e-6391.11Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAG+ KYPSKVIRKDS KKT KKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSK +KVAA+KEIKKR+E+RFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

A0A5A7SSA5 60S ribosomal protein L274.4e-6391.11Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAG+ KYPSKVIRKDS KKT KKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSK +KVAA+KEIKKR+E+RFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

A0A6J1CPX4 60S ribosomal protein L272.6e-6899.26Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPS+VIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

A0A6J1FNC2 60S ribosomal protein L276.1e-6593.33Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSK +KVAA+KEIKKR+E+RFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

A0A6J1J143 60S ribosomal protein L277.2e-6694.07Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAG+ KYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQH+MPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSKG+KVAAAKEIKKR+E+RFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

SwissProt top hitse value%identityAlignment
P41101 60S ribosomal protein L271.1e-5275.54Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDL----KDVVN
        M KF+KPNKAV++LQG++AGRKAVIVR FD+GTRDRPYGHCLVAGIS+YP KVIRKDS KK  KKSRVKAFIKLVNY H+MPTRYTLD DL    KDVVN
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDL----KDVVN

Query:  VDCLQSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
         D LQ++  KV  A+  K R+ ERFKTGKNRWFFTKLRF
Subjt:  VDCLQSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

P51419 60S ribosomal protein L27-31.8e-5880.74Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAV++LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+ KYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSK  KVAA KE K ++EERFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

Q05462 60S ribosomal protein L271.8e-5881.48Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+KPNKAV++LQGR+AG+KAVIV+ FDDGTR++PYGHCLVAGI K+PSKVI+KDS KKTAKKSRVKAF+KLVNYQHLMPTRYTLDVDLKD V  D L
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSK  KV A KE KK +EERFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

Q8LCL3 60S ribosomal protein L27-22.2e-5678.52Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAV++LQGR+AG+KAVI+++FDDGT DR YGHCLVAG+ KYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        +SK  KV A KE K ++EERFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

Q9SKX8 60S ribosomal protein L27-12.0e-5272.59Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVK +KP KAV++LQGR+ G+KAVIV++FDDGT ++ YGHCLVAG+ KYPSKVIRKDS KKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D +
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
         SK  KV A KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

Arabidopsis top hitse value%identityAlignment
AT2G32220.1 Ribosomal L27e protein family1.4e-5372.59Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVK +KP KAV++LQGR+ G+KAVIV++FDDGT ++ YGHCLVAG+ KYPSKVIRKDS KKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D +
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
         SK  KV A KE K + EERFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

AT3G22230.1 Ribosomal L27e protein family1.6e-5778.52Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAV++LQGR+AG+KAVI+++FDDGT DR YGHCLVAG+ KYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        +SK  KV A KE K ++EERFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

AT4G15000.1 Ribosomal L27e protein family1.3e-5980.74Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAV++LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+ KYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF
        QSK  KVAA KE K ++EERFKTGKNRWFFTKLRF
Subjt:  QSKGTKVAAAKEIKKRMEERFKTGKNRWFFTKLRF

AT4G15000.2 Ribosomal L27e protein family7.6e-5278.86Show/hide
Query:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAV++LQGR+AG+KAVI+++FDDG RDRPYGHCLVAG+ KYPSKVIRKDS KKTAKKSRVK FIKLVNYQHLMPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCL

Query:  QSKGTKVAAAKEIKKRMEERFKT
        QSK  KVAA KE K ++EERFKT
Subjt:  QSKGTKVAAAKEIKKRMEERFKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAATTTATCAAGCCGAACAAGGCGGTCGTTGTTCTACAAGGCCGATTCGCCGGCCGGAAGGCTGTGATAGTGCGCAACTTCGATGATGGAACCCGGGATCGACC
CTACGGCCATTGTCTGGTGGCGGGGATCAGCAAGTACCCGAGTAAGGTGATTCGCAAAGATTCGACCAAGAAGACGGCGAAGAAATCGAGAGTGAAGGCCTTCATCAAGC
TTGTGAACTACCAGCACCTCATGCCGACGAGGTACACACTCGACGTCGATCTCAAGGATGTGGTTAATGTGGATTGTTTGCAGTCGAAGGGCACGAAGGTTGCGGCGGCG
AAGGAGATCAAGAAGAGGATGGAGGAGAGGTTTAAGACTGGGAAGAATAGGTGGTTTTTTACCAAGCTTAGGTTC
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAATTTATCAAGCCGAACAAGGCGGTCGTTGTTCTACAAGGCCGATTCGCCGGCCGGAAGGCTGTGATAGTGCGCAACTTCGATGATGGAACCCGGGATCGACC
CTACGGCCATTGTCTGGTGGCGGGGATCAGCAAGTACCCGAGTAAGGTGATTCGCAAAGATTCGACCAAGAAGACGGCGAAGAAATCGAGAGTGAAGGCCTTCATCAAGC
TTGTGAACTACCAGCACCTCATGCCGACGAGGTACACACTCGACGTCGATCTCAAGGATGTGGTTAATGTGGATTGTTTGCAGTCGAAGGGCACGAAGGTTGCGGCGGCG
AAGGAGATCAAGAAGAGGATGGAGGAGAGGTTTAAGACTGGGAAGAATAGGTGGTTTTTTACCAAGCTTAGGTTC
Protein sequenceShow/hide protein sequence
MVKFIKPNKAVVVLQGRFAGRKAVIVRNFDDGTRDRPYGHCLVAGISKYPSKVIRKDSTKKTAKKSRVKAFIKLVNYQHLMPTRYTLDVDLKDVVNVDCLQSKGTKVAAA
KEIKKRMEERFKTGKNRWFFTKLRF