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MS000775 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000775
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L18a-like protein
Genome locationscaffold1574:368188..369088
RNA-Seq ExpressionMS000775
SyntenyMS000775
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7955329.1 hypothetical protein I3843_11G065600 [Carya illinoinensis]8.4e-3579.76Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYAI EG PVRERRLPCCGIG+GWFLF+IGFF+V IPWY GA++ILC R+DYREKPGY+ACT+AAIL TLA+ILGVTKG D W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

PIA41567.1 hypothetical protein AQUCO_02200184v1 [Aquilegia coerulea]1.1e-3478.57Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYA+VEGRPVRE RLPCCGIGIGW LF++GFF   IPWYAGAI+I+C RVDYREKPGYVACTIAA+L ++A +LGVTKGVD W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

XP_010092747.1 60S ribosomal protein L18a-like protein [Morus notabilis]3.4e-3678.57Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYA+ EGRPVRERRLPCCGIGIGWFLFIIGFF+ G+PWYAGA+++LC R+DYREKPGY+ACT+AAIL T+A++LGVTKG D W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

XP_022135554.1 60S ribosomal protein L18a-like protein [Momordica charantia]9.3e-42100Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

XP_042949951.1 60S ribosomal protein L18a-like protein isoform X2 [Carya illinoinensis]8.4e-3579.76Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYAI EG PVRERRLPCCGIG+GWFLF+IGFF+V IPWY GA++ILC R+DYREKPGY+ACT+AAIL TLA+ILGVTKG D W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

TrEMBL top hitse value%identityAlignment
A0A2G5DEA8 Uncharacterized protein5.3e-3578.57Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYA+VEGRPVRE RLPCCGIGIGW LF++GFF   IPWYAGAI+I+C RVDYREKPGYVACTIAA+L ++A +LGVTKGVD W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

A0A2N9IIE7 Uncharacterized protein9.1e-3577.38Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYA+ EGRPVRERRLPCCGIG GWFLFIIGFF+  IPWY GA+++LC R+DYREKPGY+ACT+AAIL TLA+ILG TKG D W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

A0A6A1VVT8 60S ribosomal protein L18a-like protein7.0e-3577.38Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYA+ EGRPVRERRLPCCGIG+GWFLFIIGFF+  IPWY GA+ ++C R+DYREKPGY+ACT+AAIL TLA+ILGVTKG D W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

A0A6J1C1R6 60S ribosomal protein L18a-like protein4.5e-42100Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

W9QZI1 60S ribosomal protein L18a-11.7e-3678.57Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        PGYA+ EGRPVRERRLPCCGIGIGWFLFIIGFF+ G+PWYAGA+++LC R+DYREKPGY+ACT+AAIL T+A++LGVTKG D W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein1.4e-2454.76Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        P Y +VE RP+ E  LPCCG+G+GWFLFI+GF   GIPWY GA ++L   VD+REK GYVAC+IA+++  +A++LG+T  +++W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family9.3e-3270.37Show/hide
Query:  IVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCG-RVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        + EGRPVR+RRLPCCGIG+GWFLFI+GFF+  IPWY G  +++ G R+DYREKPGY+ACTIAAIL T+A+ILGV+KG D W
Subjt:  IVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCG-RVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

AT1G29970.1 60S ribosomal protein L18A-11.0e-2554.76Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        P Y +VE RP+ E  LPCCG+G+GWFLFI+GF   GIPWY GA ++L   VD+REK GYVAC+IA+++  +A++LG+T  +++W
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

AT1G29970.2 60S ribosomal protein L18A-13.3e-2163.08Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIA
        P Y +VE RP+ E  LPCCG+G+GWFLFI+GF   GIPWY GA ++L   VD+REK GYVAC+IA
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIA

AT1G29970.3 60S ribosomal protein L18A-11.4e-1936.51Show/hide
Query:  PGYAIVEGRPVRERRLPCCGIGIGWFL------------------------------------------FIIGFFIVGIPWYAGAIVILCGRVDYREKPG
        P Y +VE RP+ E  LPCCG+G+GWFL                                          FI+GF   GIPWY GA ++L   VD+REK G
Subjt:  PGYAIVEGRPVRERRLPCCGIGIGWFL------------------------------------------FIIGFFIVGIPWYAGAIVILCGRVDYREKPG

Query:  YVACTIAAILGTLALILGVTKGVDVW
        YVAC+IA+++  +A++LG+T  +++W
Subjt:  YVACTIAAILGTLALILGVTKGVDVW

AT1G53560.1 Ribosomal protein L18ae family4.3e-2959.04Show/hide
Query:  GYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW
        GY + +GRP R+ RLPCCG+G+GWFLFIIGF +  IPWY G  +++C R+D REKPGYVACTIAA++ T+ ++ GV  G  VW
Subjt:  GYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAGGATATGCTATTGTCGAAGGAAGACCAGTGAGAGAGAGACGCCTTCCTTGCTGTGGTATTGGCATTGGGTGGTTCCTGTTCATTATTGGTTTCTTCATTGTTGGCAT
CCCGTGGTATGCTGGGGCAATTGTCATACTATGTGGCAGGGTAGACTACCGCGAGAAACCTGGATATGTTGCCTGCACAATTGCTGCTATTCTTGGCACACTTGCACTTA
TTCTTGGCGTAACGAAGGGAGTTGATGTCTGG
mRNA sequenceShow/hide mRNA sequence
CCAGGATATGCTATTGTCGAAGGAAGACCAGTGAGAGAGAGACGCCTTCCTTGCTGTGGTATTGGCATTGGGTGGTTCCTGTTCATTATTGGTTTCTTCATTGTTGGCAT
CCCGTGGTATGCTGGGGCAATTGTCATACTATGTGGCAGGGTAGACTACCGCGAGAAACCTGGATATGTTGCCTGCACAATTGCTGCTATTCTTGGCACACTTGCACTTA
TTCTTGGCGTAACGAAGGGAGTTGATGTCTGG
Protein sequenceShow/hide protein sequence
PGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW