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MS000794 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000794
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold902:15285..15680
RNA-Seq ExpressionMS000794
SyntenyMS000794
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579224.1 hypothetical protein SDJN03_23672, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4878.03Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
        M+IIATPS+ S++R WRRR+YQRLGS  G  RSRSFRLGRLWRMRR AP+LR KMASPLK+LARFHDAYV+MM RVAN VGNMYAIG FG G   + IPK
Subjt:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK

Query:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
        P NQ+SLVSCGGEQVDAKLV+EIYNKLA SKN
Subjt:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

KAG7016737.1 hypothetical protein SDJN02_21847, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-4878.03Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
        M+IIATPS+ S++R WRRR+YQRLGS  G  RSRSFRLGRLWRMRR AP+LR KMASPLK+LARFHDAYV+MM RVAN VGNMYAIG FG G   + IPK
Subjt:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK

Query:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
        P NQ+SLVSCGGEQVDAKLV+EIYNKLA SKN
Subjt:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

XP_022152306.1 uncharacterized protein LOC111020054 [Momordica charantia]1.5e-6599.24Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
        MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
Subjt:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK

Query:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
        PGNQVSLVSCGGEQVDAKLV+EIYNKLAASKN
Subjt:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

XP_022993314.1 uncharacterized protein LOC111489358 [Cucurbita maxima]1.5e-4675Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
        M+IIATPS+ S++R WRRR+YQRLGS  G  RSRSFRLGRLWR+RR AP+LR KM SP K LARFHDAYV+MMMRVAN VG+MYAIG +G G   + IPK
Subjt:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK

Query:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
        P NQVSLVSCGGEQVD KLV+E+YNKLAASKN
Subjt:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

XP_023550637.1 uncharacterized protein LOC111808720 [Cucurbita pepo subsp. pepo]5.2e-4777.27Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
        M+IIATPS+ S++R WRRR+YQRLGS  G  RSRSF LGRLWRMRR AP+LR KMASPLK+LARFHDAYV+MM RVAN VGNMYAIG FG G   + IPK
Subjt:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK

Query:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
         GNQVSLV CGGEQVDAKLV+E+YNKLAASKN
Subjt:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

TrEMBL top hitse value%identityAlignment
A0A5D3BKB9 Uncharacterized protein2.0e-3667.65Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRL--GSSNGPTRS-RSFRLGRLWRMRRGA-PRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRR
        M+IIAT S++++RR WRRR YQRL  GS+  PTRS RSFR+GR+  MRR A P+LR KM+SPLK++A+ HDAYVEMMMR+AN VGNMYAIG F   G R+
Subjt:  MEIIATPSSESIRRTWRRRKYQRL--GSSNGPTRS-RSFRLGRLWRMRRGA-PRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRR

Query:  MIPKPGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
         IPKP NQV L   GGEQ+DAKLV+EIYNKLA+SKN
Subjt:  MIPKPGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

A0A6J1DHB4 uncharacterized protein LOC1110200547.0e-6699.24Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
        MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
Subjt:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK

Query:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
        PGNQVSLVSCGGEQVDAKLV+EIYNKLAASKN
Subjt:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

A0A6J1FGC7 uncharacterized protein LOC1114451689.5e-4776.52Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
        M+IIATPS+ S++R WRRR+YQRLGS  G  RSRSF LGRLWRMRR AP+LR KMA P K LARFHDAYV+MM RVAN VGNMYAIG FG G   + IPK
Subjt:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK

Query:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
        P NQVSLVSCGGEQVDAKLV+E+YNKLAASKN
Subjt:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

A0A6J1H4C2 uncharacterized protein LOC1114603578.4e-4370.45Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
        M+IIATPS++ +RR WRRR YQ+LGS   PTRSRSFRL RLW MRR A +++ K+ASPLKLLA+FHD YVEMMM+VAN VGN+YAIGAFG G   + IPK
Subjt:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK

Query:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
        P NQVSL +C GE VDAK V+EIYNKLA SKN
Subjt:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

A0A6J1JZV2 uncharacterized protein LOC1114893587.3e-4775Show/hide
Query:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK
        M+IIATPS+ S++R WRRR+YQRLGS  G  RSRSFRLGRLWR+RR AP+LR KM SP K LARFHDAYV+MMMRVAN VG+MYAIG +G G   + IPK
Subjt:  MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPK

Query:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN
        P NQVSLVSCGGEQVD KLV+E+YNKLAASKN
Subjt:  PGNQVSLVSCGGEQVDAKLVVEIYNKLAASKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47485.1 unknown protein2.8e-0636.09Show/hide
Query:  RTWRR-RKYQRLGSS---------------NGPTRSRSFRLGRLWRMRRGAPRLR-FKMASPLKLLARFHDAYVEMMMRVANG--VGNMYAIGAFGGGGK
        R WRR R YQRL  S                 PTR R     R WR++   P+LR  K ASP KLL    DAYV MM+R+AN   VG+ Y  G +G G  
Subjt:  RTWRR-RKYQRLGSS---------------NGPTRSRSFRLGRLWRMRRGAPRLR-FKMASPLKLLARFHDAYVEMMMRVANG--VGNMYAIGAFGGGGK

Query:  RRMIPKPGNQVSLVSCGGEQVDAKLVVEIYNKL
                          ++ D K +VEIY  +
Subjt:  RRMIPKPGNQVSLVSCGGEQVDAKLVVEIYNKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCATTGCAACCCCATCTTCAGAAAGCATAAGGAGGACATGGAGAAGGAGAAAATACCAGAGGTTAGGTAGTAGTAATGGCCCTACAAGATCAAGGAGTTTCAG
GTTGGGGCGGCTATGGCGGATGAGAAGAGGCGCTCCAAGGCTGCGGTTTAAAATGGCATCGCCGTTGAAGCTTCTGGCGAGGTTCCACGATGCGTACGTCGAGATGATGA
TGAGGGTGGCGAACGGTGTCGGGAATATGTACGCGATCGGAGCGTTTGGTGGTGGTGGGAAGAGGAGGATGATCCCAAAACCAGGAAATCAAGTGTCCTTGGTTTCTTGT
GGGGGAGAACAAGTTGATGCTAAATTGGTTGTGGAAATCTATAACAAACTTGCTGCCTCCAAGAAC
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCATTGCAACCCCATCTTCAGAAAGCATAAGGAGGACATGGAGAAGGAGAAAATACCAGAGGTTAGGTAGTAGTAATGGCCCTACAAGATCAAGGAGTTTCAG
GTTGGGGCGGCTATGGCGGATGAGAAGAGGCGCTCCAAGGCTGCGGTTTAAAATGGCATCGCCGTTGAAGCTTCTGGCGAGGTTCCACGATGCGTACGTCGAGATGATGA
TGAGGGTGGCGAACGGTGTCGGGAATATGTACGCGATCGGAGCGTTTGGTGGTGGTGGGAAGAGGAGGATGATCCCAAAACCAGGAAATCAAGTGTCCTTGGTTTCTTGT
GGGGGAGAACAAGTTGATGCTAAATTGGTTGTGGAAATCTATAACAAACTTGCTGCCTCCAAGAAC
Protein sequenceShow/hide protein sequence
MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSC
GGEQVDAKLVVEIYNKLAASKN