; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000797 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000797
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger CCCH domain-containing protein 15-like
Genome locationscaffold902:79788..82313
RNA-Seq ExpressionMS000797
SyntenyMS000797
Gene Ontology termsGO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152275.1 zinc finger CCCH domain-containing protein 15-like [Momordica charantia]6.0e-18299.69Show/hide
Query:  MHKSTTSATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHEL
        MHKSTTSATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHEL
Subjt:  MHKSTTSATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHEL

Query:  SKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRT
        SKHLSLLIHASVQKQYASPDQAPSFNLVEGF GLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRT
Subjt:  SKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRT

Query:  SSRPRTASPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHAL
        SSRPRTASPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHAL
Subjt:  SSRPRTASPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHAL

Query:  TDQERLMGPLKPSARTPKLDR
        TDQERLMGPLKPSARTPKLDR
Subjt:  TDQERLMGPLKPSARTPKLDR

XP_022938877.1 zinc finger CCCH domain-containing protein 15-like isoform X1 [Cucurbita moschata]4.2e-15984.77Show/hide
Query:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL
        MHKSTTSA       T MSSSSQLKSQ +TN+VYASLYNS IFAPKQSVPVSLP TLYGDS H                  VVQDHQEMVNRHSLCLTHL
Subjt:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL

Query:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS
        REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY S DQ P FN VEGFRGL V EKGASSSTWE++ DESPTSVMEGGRVEGVEVERFSLPKS
Subjt:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS

Query:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
        ISVRSNGYLK+AQGG++QGGK+R SSRPRTASP K  QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Subjt:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY

Query:  KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR
        KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKP+ RT PKLDR
Subjt:  KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR

XP_022938879.1 zinc finger CCCH domain-containing protein 15-like isoform X2 [Cucurbita moschata]1.6e-15884.73Show/hide
Query:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL
        MHKSTTSA       T MSSSSQLKSQ +TN+VYASLYNS IFAPKQSVPVSLP TLYGDS H                  VVQDHQEMVNRHSLCLTHL
Subjt:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL

Query:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS
        REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY S DQ P FN VEGFRGL V EKGASSSTWE++ DESPTSVMEGGRVEGVEVERFSLPKS
Subjt:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS

Query:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK-QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYK
        ISVRSNGYLK+AQGG++QGGK+R SSRPRTASP K  KVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYK
Subjt:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK-QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYK

Query:  TEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR
        TEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKP+ RT PKLDR
Subjt:  TEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR

XP_023551304.1 zinc finger CCCH domain-containing protein 15-like isoform X3 [Cucurbita pepo subsp. pepo]1.3e-16085.26Show/hide
Query:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL
        MHKSTTSA       T MSSSSQLKSQ +TN+VYASLYNS IFAPKQSVPVSLP TLYGDS H                  VVQDHQEMVNRHSLCLTHL
Subjt:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL

Query:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS
        REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY S DQ P FN VEGFRGL V EKGASSSTWE++ DESPTSVMEGGRVEGVEVERFSLPKS
Subjt:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS

Query:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKT
        ISVRSNGYLK+AQGG++QGGK+R SSRPRTASP KQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKT
Subjt:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKT

Query:  EVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR
        EVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKP+ RT PKLDR
Subjt:  EVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR

XP_038875724.1 zinc finger CCCH domain-containing protein 15-like isoform X1 [Benincasa hispida]2.1e-15883.95Show/hide
Query:  MHKSTTS-------ATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNH-----------------RVVQDHQEMVNRHSLCLTHL
        MHKSTTS       AT MSSSSQLKSQ + NDVYASLYNSPIFAPKQSVPVSLPLTLYGDS H                 RVVQDHQEMVNRHSLCLTHL
Subjt:  MHKSTTS-------ATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNH-----------------RVVQDHQEMVNRHSLCLTHL

Query:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS
        REATEEADALRQENIHLR+INHELSKHLSLLIHASVQKQY S DQAP FN +EGFRGL V EKGASSS W+++ DESPTSVMEGGRVEGVEVERFSLPKS
Subjt:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS

Query:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
        ISVRSNGYLK+AQ GT+ GGK+R SSRPRTASP K  QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Subjt:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY

Query:  KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSAR--TPKLDR
        KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMG LKP+ R  TPKLDR
Subjt:  KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSAR--TPKLDR

TrEMBL top hitse value%identityAlignment
A0A1S3CSW3 zinc finger CCCH domain-containing protein 15-like isoform X18.5e-15884.05Show/hide
Query:  MHKSTTS-------ATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNH------------------RVVQDHQEMVNRHSLCLTH
        MHKSTTS       AT MSSSSQLKSQ +TNDVYASLYNSPIFAPKQ VPVSLPLTLYGDS H                  RVVQDHQEMVNRHSLCLT 
Subjt:  MHKSTTS-------ATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNH------------------RVVQDHQEMVNRHSLCLTH

Query:  LREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPK
        LREATEEADALRQENIHLRSINHELSKHLSLLI ASVQKQY S DQAP FN VEGFRGL + EKGASSS WE++ DESPTSVMEGGRVEGVEVERFSLPK
Subjt:  LREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPK

Query:  SISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
        SISVRSNGYLK+AQ GT+QGGKIR SSRPRTASP K  QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR
Subjt:  SISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPR

Query:  YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSAR---TPKLDR
        YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMG LKP+ R   TPKLDR
Subjt:  YKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSAR---TPKLDR

A0A6J1DDH9 zinc finger CCCH domain-containing protein 15-like2.9e-18299.69Show/hide
Query:  MHKSTTSATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHEL
        MHKSTTSATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHEL
Subjt:  MHKSTTSATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHEL

Query:  SKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRT
        SKHLSLLIHASVQKQYASPDQAPSFNLVEGF GLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRT
Subjt:  SKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRT

Query:  SSRPRTASPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHAL
        SSRPRTASPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHAL
Subjt:  SSRPRTASPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHAL

Query:  TDQERLMGPLKPSARTPKLDR
        TDQERLMGPLKPSARTPKLDR
Subjt:  TDQERLMGPLKPSARTPKLDR

A0A6J1FFE7 zinc finger CCCH domain-containing protein 15-like isoform X27.7e-15984.73Show/hide
Query:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL
        MHKSTTSA       T MSSSSQLKSQ +TN+VYASLYNS IFAPKQSVPVSLP TLYGDS H                  VVQDHQEMVNRHSLCLTHL
Subjt:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL

Query:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS
        REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY S DQ P FN VEGFRGL V EKGASSSTWE++ DESPTSVMEGGRVEGVEVERFSLPKS
Subjt:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS

Query:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK-QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYK
        ISVRSNGYLK+AQGG++QGGK+R SSRPRTASP K  KVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYK
Subjt:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK-QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYK

Query:  TEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR
        TEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKP+ RT PKLDR
Subjt:  TEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR

A0A6J1FK54 zinc finger CCCH domain-containing protein 15-like isoform X12.0e-15984.77Show/hide
Query:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL
        MHKSTTSA       T MSSSSQLKSQ +TN+VYASLYNS IFAPKQSVPVSLP TLYGDS H                  VVQDHQEMVNRHSLCLTHL
Subjt:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL

Query:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS
        REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY S DQ P FN VEGFRGL V EKGASSSTWE++ DESPTSVMEGGRVEGVEVERFSLPKS
Subjt:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS

Query:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
        ISVRSNGYLK+AQGG++QGGK+R SSRPRTASP K  QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Subjt:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY

Query:  KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR
        KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKP+ RT PKLDR
Subjt:  KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR

A0A6J1JUH1 zinc finger CCCH domain-containing protein 15-like isoform X15.0e-15884.2Show/hide
Query:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL
        MHKSTTSA       T MSSSSQLKSQ +TN+VYASLYNS IFAPKQSVPVSLP TLYGDS H                  VVQDHQEMVNRHSLCLTHL
Subjt:  MHKSTTSA-------TAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHR-----------------VVQDHQEMVNRHSLCLTHL

Query:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS
        REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY S DQ   FN VEGFRGL V EKG SSSTWE++ DESPTSVMEGGRVEGVEVERFSLPKS
Subjt:  REATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKS

Query:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
        ISVRSNGYLK+AQGG++QGGK+R SSRPRTASP K  QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY
Subjt:  ISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAK--QKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRY

Query:  KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR
        KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKP+ RT PKLDR
Subjt:  KTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSART-PKLDR

SwissProt top hitse value%identityAlignment
A2ZVY5 Zinc finger CCCH domain-containing protein 91.6e-5749.06Show/hide
Query:  RVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTS
        R+   +QE+ +R+ LCL+HL EA EEA ALR EN  LR  N +L+  L+LL          S     +  + +  R L +GE+  +++T E   ++    
Subjt:  RVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTS

Query:  VMEGGRVEGVEVERFSLPKSISVRSNGYLKI---AQGGTTQGG----KIRTSSRPRTASPAKQKVYVQGVKEEEKP-------LELEVYNQGMFKTELCN
                        LPKSISVRS  YLK+   +Q  T        K RTSS P T  P  Q+ Y  G K +E+         ELEVYNQGMFKTELCN
Subjt:  VMEGGRVEGVEVERFSLPKSISVRSNGYLKI---AQGGTTQGG----KIRTSSRPRTASPAKQKVYVQGVKEEEKP-------LELEVYNQGMFKTELCN

Query:  KWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM
        KW+ETG CPYGD CQFAHG+ ELRPVIRHPRYKT VCRMVLAG VCPYGHRCHFRH+LT  ERL+
Subjt:  KWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM

Q10MN8 Putative zinc finger CCCH domain-containing protein 211.0e-3033.22Show/hide
Query:  YASLYNSPIFAPKQSVP------VSLPLTLYGDSNHRVVQDH---QEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYA
        +AS    P+ +P   V        S PL    +    V +     + +  R+  C   LR+A  E   L +E + L + N     HLSLL+     +Q  
Subjt:  YASLYNSPIFAPKQSVP------VSLPLTLYGDSNHRVVQDH---QEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYA

Query:  SPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYL--KIAQG-GTTQGGKIRTSSRPRTASP-----
                                              S M   ++E  E  +   PKSIS+RS GYL  K  QG    Q  ++R S     + P     
Subjt:  SPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYL--KIAQG-GTTQGGKIRTSSRPRTASP-----

Query:  ------AKQKVYVQGVKEEEK-----PLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRH
              + ++    G +E+E+      +E+E Y QG  KTELCNKW E G+CPYG  C+FAHG++ELRPVIRHPRYKT  C+M  A   CPYGHRCHFRH
Subjt:  ------AKQKVYVQGVKEEEK-----PLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRH

Query:  A
        +
Subjt:  A

Q6L5G1 Zinc finger CCCH domain-containing protein 391.7e-5448.06Show/hide
Query:  HQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGG
        +QEM NR  LCL+HL +A +EA ALRQEN  LR  N++L+  ++               Q+ +  L    R L +  K  +           P ++M   
Subjt:  HQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGG

Query:  RVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAKQKVYV-----------QGVKEEEKP---LELEVYNQGMFKTELCNKWQET
            V  ++  LPKSIS+RS GY K+      QGGK R S   +  +   Q+V+V            GVK+EE P   LE EVYNQGMFKTELCNKW+ET
Subjt:  RVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAKQKVYV-----------QGVKEEEKP---LELEVYNQGMFKTELCNKWQET

Query:  GSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQER
        G+CPYGD CQFAHG+ ELRPVIRHPRYKT+VCRMVLAG VCPYGHRCHFRH++T  +R
Subjt:  GSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQER

Q9C9F5 Zinc finger CCCH domain-containing protein 152.9e-7055.11Show/hide
Query:  TLYGD----SNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY--ASPDQAPSFNLVEGFRGLCVGEKGAS
        +LY D    S   ++Q  Q+MVNR +LC T L EA+ EA+ALR EN  LRS+N  L   L+ LI +S+Q ++   SP +  S NL  G       E    
Subjt:  TLYGD----SNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY--ASPDQAPSFNLVEGFRGLCVGEKGAS

Query:  SSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGG---TTQGGKIR-TSSRPRTASPAK--QKVYVQG---VKEEEKPLELEVYNQ
        +   ++V D+SPTSVM     E  ++ R SLPKSISVRSNGY K +QGG     Q GK R T ++P T       QKVYV+G    +++E+ +E+EVYNQ
Subjt:  SSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGG---TTQGGKIR-TSSRPRTASPAK--QKVYVQG---VKEEEKPLELEVYNQ

Query:  GMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM
        GM KTELCNKWQETG+CPYGDHCQFAHGI+ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRH+L++QE+L+
Subjt:  GMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM

Q9C9N3 Zinc finger CCCH domain-containing protein 142.8e-5745.67Show/hide
Query:  KSQHRTNDVYASLYNSPIFAPKQSVP-----VSLPLTLYGDSNHRVVQ-----DHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLL
        K Q      +ASLYNS IF+P+   P      S P  +   + HR++Q     ++ E+   + LCL  L+    E D+LR EN  LR  N +L K    L
Subjt:  KSQHRTNDVYASLYNSPIFAPKQSVP-----VSLPLTLYGDSNHRVVQ-----DHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLL

Query:  IHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRTSSRPRTA
        I  S     +    AP  N    FR      + A  +                        ER SLPKSISVRS GYLKI  G   +   ++TS     +
Subjt:  IHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRTSSRPRTA

Query:  SPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM
          + QKV V   K E + LELEVY QGM KTELCNKWQETG+C YGD+CQFAHGI+ELRPVIRHPRYKTEVCRM++ G +CPYGHRCHFRH+LTDQER+M
Subjt:  SPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM

Arabidopsis top hitse value%identityAlignment
AT1G32360.1 Zinc finger (CCCH-type) family protein1.8e-0647.37Show/hide
Query:  LEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEEL
        +++     +KT +CNKW+ TG CP+G  C FAHG  EL
Subjt:  LEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEEL

AT1G66810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.0e-5845.67Show/hide
Query:  KSQHRTNDVYASLYNSPIFAPKQSVP-----VSLPLTLYGDSNHRVVQ-----DHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLL
        K Q      +ASLYNS IF+P+   P      S P  +   + HR++Q     ++ E+   + LCL  L+    E D+LR EN  LR  N +L K    L
Subjt:  KSQHRTNDVYASLYNSPIFAPKQSVP-----VSLPLTLYGDSNHRVVQ-----DHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLL

Query:  IHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRTSSRPRTA
        I  S     +    AP  N    FR      + A  +                        ER SLPKSISVRS GYLKI  G   +   ++TS     +
Subjt:  IHASVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRTSSRPRTA

Query:  SPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM
          + QKV V   K E + LELEVY QGM KTELCNKWQETG+C YGD+CQFAHGI+ELRPVIRHPRYKTEVCRM++ G +CPYGHRCHFRH+LTDQER+M
Subjt:  SPAKQKVYVQGVKEEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM

AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.1e-7155.11Show/hide
Query:  TLYGD----SNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY--ASPDQAPSFNLVEGFRGLCVGEKGAS
        +LY D    S   ++Q  Q+MVNR +LC T L EA+ EA+ALR EN  LRS+N  L   L+ LI +S+Q ++   SP +  S NL  G       E    
Subjt:  TLYGD----SNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY--ASPDQAPSFNLVEGFRGLCVGEKGAS

Query:  SSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGG---TTQGGKIR-TSSRPRTASPAK--QKVYVQG---VKEEEKPLELEVYNQ
        +   ++V D+SPTSVM     E  ++ R SLPKSISVRSNGY K +QGG     Q GK R T ++P T       QKVYV+G    +++E+ +E+EVYNQ
Subjt:  SSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGG---TTQGGKIR-TSSRPRTASPAK--QKVYVQG---VKEEEKPLELEVYNQ

Query:  GMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM
        GM KTELCNKWQETG+CPYGDHCQFAHGI+ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRH+L++QE+L+
Subjt:  GMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM

AT1G68200.2 Zinc finger C-x8-C-x5-C-x3-H type family protein7.8e-7154.95Show/hide
Query:  TLYGD----SNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY--ASPDQAPSFNLVEGFRGLCVGEKGAS
        +LY D    S   ++Q  Q+MVNR +LC T L EA+ EA+ALR EN  LRS+N  L   L+ LI +S+Q ++   SP +  S NL  G       E    
Subjt:  TLYGD----SNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHASVQKQY--ASPDQAPSFNLVEGFRGLCVGEKGAS

Query:  SSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGG---TTQGGKIR-TSSRPRTASP-AKQKVYVQG---VKEEEKPLELEVYNQG
        +   ++V D+SPTSVM     E  ++ R SLPKSISVRSNGY K +QGG     Q GK R T ++P T    +  KVYV+G    +++E+ +E+EVYNQG
Subjt:  SSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGG---TTQGGKIR-TSSRPRTASP-AKQKVYVQG---VKEEEKPLELEVYNQG

Query:  MFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM
        M KTELCNKWQETG+CPYGDHCQFAHGI+ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRH+L++QE+L+
Subjt:  MFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLM

AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein7.2e-0866.67Show/hide
Query:  FKTELCNKWQETGSCPYGDHCQFAHGIEEL
        +KT +CNKWQ TG CP+G HC FAHG  EL
Subjt:  FKTELCNKWQETGSCPYGDHCQFAHGIEEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAGAGCACCACCTCTGCAACTGCTATGTCATCGTCGTCGCAGCTTAAGTCTCAGCATCGAACAAACGATGTTTATGCTTCCCTCTATAATTCTCCAATCTTTGC
TCCCAAACAATCCGTTCCAGTCTCTCTTCCATTGACTCTCTATGGAGACTCGAATCACCGAGTCGTTCAAGATCACCAGGAAATGGTTAATCGACATAGCCTCTGCCTCA
CTCATCTTCGGGAAGCAACCGAAGAAGCGGACGCTCTTAGACAAGAGAATATCCACCTCAGAAGTATTAACCACGAGCTTAGCAAACACCTGAGCCTCCTGATCCACGCT
TCGGTTCAGAAACAGTACGCCTCCCCTGATCAAGCTCCTTCGTTTAATTTAGTGGAGGGATTCCGCGGACTCTGTGTTGGGGAGAAGGGAGCAAGCAGTTCGACATGGGA
AGAAGTTTGCGATGAGAGCCCGACGAGCGTAATGGAGGGTGGAAGGGTAGAGGGCGTTGAAGTGGAGAGATTTTCGCTCCCAAAAAGCATCTCTGTGAGGTCCAATGGGT
ACCTGAAGATTGCTCAAGGAGGCACCACCCAGGGCGGAAAGATCCGCACCTCATCTCGTCCCAGAACTGCAAGTCCTGCCAAGCAAAAGGTGTACGTGCAAGGAGTGAAA
GAAGAGGAAAAGCCACTGGAACTGGAGGTGTACAACCAGGGGATGTTCAAGACGGAGCTCTGTAACAAATGGCAAGAAACGGGCAGCTGCCCTTATGGAGACCACTGCCA
GTTCGCCCACGGCATAGAGGAGCTCCGCCCTGTCATCCGCCACCCCCGCTACAAGACGGAGGTGTGTCGGATGGTCCTGGCCGGAGTCGTCTGCCCGTACGGTCACCGCT
GCCACTTCCGCCATGCCCTCACTGACCAGGAAAGGCTCATGGGGCCGCTGAAGCCCTCCGCCAGGACCCCCAAGCTCGACAGG
mRNA sequenceShow/hide mRNA sequence
ATGCACAAGAGCACCACCTCTGCAACTGCTATGTCATCGTCGTCGCAGCTTAAGTCTCAGCATCGAACAAACGATGTTTATGCTTCCCTCTATAATTCTCCAATCTTTGC
TCCCAAACAATCCGTTCCAGTCTCTCTTCCATTGACTCTCTATGGAGACTCGAATCACCGAGTCGTTCAAGATCACCAGGAAATGGTTAATCGACATAGCCTCTGCCTCA
CTCATCTTCGGGAAGCAACCGAAGAAGCGGACGCTCTTAGACAAGAGAATATCCACCTCAGAAGTATTAACCACGAGCTTAGCAAACACCTGAGCCTCCTGATCCACGCT
TCGGTTCAGAAACAGTACGCCTCCCCTGATCAAGCTCCTTCGTTTAATTTAGTGGAGGGATTCCGCGGACTCTGTGTTGGGGAGAAGGGAGCAAGCAGTTCGACATGGGA
AGAAGTTTGCGATGAGAGCCCGACGAGCGTAATGGAGGGTGGAAGGGTAGAGGGCGTTGAAGTGGAGAGATTTTCGCTCCCAAAAAGCATCTCTGTGAGGTCCAATGGGT
ACCTGAAGATTGCTCAAGGAGGCACCACCCAGGGCGGAAAGATCCGCACCTCATCTCGTCCCAGAACTGCAAGTCCTGCCAAGCAAAAGGTGTACGTGCAAGGAGTGAAA
GAAGAGGAAAAGCCACTGGAACTGGAGGTGTACAACCAGGGGATGTTCAAGACGGAGCTCTGTAACAAATGGCAAGAAACGGGCAGCTGCCCTTATGGAGACCACTGCCA
GTTCGCCCACGGCATAGAGGAGCTCCGCCCTGTCATCCGCCACCCCCGCTACAAGACGGAGGTGTGTCGGATGGTCCTGGCCGGAGTCGTCTGCCCGTACGGTCACCGCT
GCCACTTCCGCCATGCCCTCACTGACCAGGAAAGGCTCATGGGGCCGCTGAAGCCCTCCGCCAGGACCCCCAAGCTCGACAGG
Protein sequenceShow/hide protein sequence
MHKSTTSATAMSSSSQLKSQHRTNDVYASLYNSPIFAPKQSVPVSLPLTLYGDSNHRVVQDHQEMVNRHSLCLTHLREATEEADALRQENIHLRSINHELSKHLSLLIHA
SVQKQYASPDQAPSFNLVEGFRGLCVGEKGASSSTWEEVCDESPTSVMEGGRVEGVEVERFSLPKSISVRSNGYLKIAQGGTTQGGKIRTSSRPRTASPAKQKVYVQGVK
EEEKPLELEVYNQGMFKTELCNKWQETGSCPYGDHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTDQERLMGPLKPSARTPKLDR