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MS000823 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000823
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionterpene synthase 10-like
Genome locationscaffold236:152513..152767
RNA-Seq ExpressionMS000823
SyntenyMS000823
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0032784 - regulation of DNA-templated transcription, elongation (biological process)
GO:0032044 - DSIF complex (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsIPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR036965 - Terpene synthase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN62192.2 hypothetical protein Csa_006747 [Cucumis sativus]4.7e-2568.24Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLSI+ E++L+ AK FTV +L++YMK+S+DE+ V IVRHAL+LPLH R+PRLETRW ID+YE+K ++NPIL+E AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

XP_011649391.2 terpene synthase 10 isoform X1 [Cucumis sativus]4.7e-2568.24Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLSI+ E++L+ AK FTV +L++YMK+S+DE+ V IVRHAL+LPLH R+PRLETRW ID+YE+K ++NPIL+E AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

XP_022158649.1 terpene synthase 10-like [Momordica charantia]5.4e-2980Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLSIK E+VLD+AK FTVN L +YMK+S DE  VDIVR ALK+P+H RIPRLE RWSIDMYEKK NINPILIEIAKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

XP_031736485.1 terpene synthase 10 isoform X2 [Cucumis sativus]4.7e-2568.24Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLSI+ E++L+ AK FTV +L++YMK+S+DE+ V IVRHAL+LPLH R+PRLETRW ID+YE+K ++NPIL+E AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

XP_038900957.1 terpene synthase 10-like [Benincasa hispida]1.0e-2467.06Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLSIK E +L+ AKCF +N+LK+Y+K+S+D+  V+IV+HAL+LPLH RI RLE RW ID+YE+   INPIL+EIAKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

TrEMBL top hitse value%identityAlignment
A0A0A0LJZ1 Uncharacterized protein6.6e-2568.24Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLS K E VL++AKCFTV +L +++K+S+DE  V+IV HALKLPLH RI RLE RWSID+YE+   +NPIL+EIAKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

A0A0A0LM58 Terpene_synth domain-containing protein8.6e-2567.06Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLSI+ E++L+ AK FTV +L++YMK+S+DE  V IVRHAL+LPLH R+PRL+TRW ID+YE+K ++NPIL+E AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

A0A0A0LM62 Terpene_synth domain-containing protein3.9e-2568.24Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLSI+ E++L+ AK FTV +L++YMK+S+DE  V IVRHAL+LPLH R+PRLETRW ID+YE+K ++NPIL+E AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

A0A0A0LMX2 Uncharacterized protein1.9e-2467.06Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLSI+ E++L+ AK FT+ +L++YMK+S DE  V IVRHAL+LPLH R+PRLETRW ID+YE+K ++NPIL+E AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

A0A6J1E012 terpene synthase 10-like2.6e-2980Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASFLSIK E+VLD+AK FTVN L +YMK+S DE  VDIVR ALK+P+H RIPRLE RWSIDMYEKK NINPILIEIAKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

SwissProt top hitse value%identityAlignment
B3TPQ7 Alpha-terpineol synthase, chloroplastic1.8e-1952.94Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEAS+L+++ E  LD+AK FT  HL+  +K + D  +  +V HAL+LPLH R+ RLE RW ID YE+  ++NP+L+E+AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

B9T536 Terpene synthase 102.1e-2052.94Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEAS+L  + E++L+ A+ F  + LK+Y++ ++D+ +  IV H+L++PLH R+PRLETRW ID+YEKK  +NP+L+E+AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

J7LH11 (+)-epi-alpha-bisabolol synthase9.5e-2149.41Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEAS+L  + E ++D A+ F  +HLKQ ++ + ++ + D + HAL+LPLH R+P+L+ RWSID YE++ ++NP+L+E+AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

Q6PWU2 (-)-alpha-terpineol synthase4.0e-1950.59Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEAS+L ++ E  ++ A+ F   HL + ++ + D+ +   V+HAL+LPLH R+PRLE RW ID+YEK+ ++NPIL+E AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

Q93X23 Myrcene synthase, chloroplastic8.1e-2047.06Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEASF  I+ E++L++A+ F+  HL++Y+K ++++ +  +V H+L+ PLH R+PRLE RW I++Y    ++NPIL+E A+LDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

Arabidopsis top hitse value%identityAlignment
AT3G25820.1 terpene synthase-like sequence-1,8-cineole5.7e-1342.05Show/hide
Query:  LYEASFLSIKAEDVLDDA-KCFTVNHLKQYM--KASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEAS+LS K++  L    + F    +++++  + +++  V +   HAL++P H R+ RL+TRW ID YEKK ++N +LIE AK+DFN
Subjt:  LYEASFLSIKAEDVLDDA-KCFTVNHLKQYM--KASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

AT3G25820.2 terpene synthase-like sequence-1,8-cineole5.7e-1342.05Show/hide
Query:  LYEASFLSIKAEDVLDDA-KCFTVNHLKQYM--KASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEAS+LS K++  L    + F    +++++  + +++  V +   HAL++P H R+ RL+TRW ID YEKK ++N +LIE AK+DFN
Subjt:  LYEASFLSIKAEDVLDDA-KCFTVNHLKQYM--KASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

AT3G25830.1 terpene synthase-like sequence-1,8-cineole5.7e-1342.05Show/hide
Query:  LYEASFLSIKAEDVLDDA-KCFTVNHLKQYM--KASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEAS+LS K++  L    + F    +++++  + +++  V +   HAL++P H R+ RL+TRW ID YEKK ++N +LIE AK+DFN
Subjt:  LYEASFLSIKAEDVLDDA-KCFTVNHLKQYM--KASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

AT4G16740.1 terpene synthase 031.2e-1541.57Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDE----RVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEAS+LS + +  L ++  +T   L+++++ +++E     +  +V HAL++P HRR+ RLE RW I++Y ++ ++NPIL+E+AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDE----RVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN

AT4G16740.2 terpene synthase 031.2e-1541.57Show/hide
Query:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDE----RVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN
        LYEAS+LS + +  L ++  +T   L+++++ +++E     +  +V HAL++P HRR+ RLE RW I++Y ++ ++NPIL+E+AKLDFN
Subjt:  LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDE----RVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTATATGAAGCTTCATTCTTATCCATCAAAGCTGAAGATGTTTTAGATGATGCAAAATGCTTTACAGTCAACCATCTAAAACAATACATGAAAGCAAGTAGAGATGAACG
TGTAGTAGACATTGTAAGGCATGCCTTGAAGCTTCCTTTACATCGGAGGATACCGAGATTAGAGACAAGGTGGTCGATTGATATGTACGAGAAAAAAGCAAACATAAATC
CTATTCTTATTGAAATTGCTAAACTAGATTTCAAT
mRNA sequenceShow/hide mRNA sequence
TTATATGAAGCTTCATTCTTATCCATCAAAGCTGAAGATGTTTTAGATGATGCAAAATGCTTTACAGTCAACCATCTAAAACAATACATGAAAGCAAGTAGAGATGAACG
TGTAGTAGACATTGTAAGGCATGCCTTGAAGCTTCCTTTACATCGGAGGATACCGAGATTAGAGACAAGGTGGTCGATTGATATGTACGAGAAAAAAGCAAACATAAATC
CTATTCTTATTGAAATTGCTAAACTAGATTTCAAT
Protein sequenceShow/hide protein sequence
LYEASFLSIKAEDVLDDAKCFTVNHLKQYMKASRDERVVDIVRHALKLPLHRRIPRLETRWSIDMYEKKANINPILIEIAKLDFN