; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000826 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000826
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionExo_endo_phos domain-containing protein
Genome locationscaffold236:177968..178225
RNA-Seq ExpressionMS000826
SyntenyMS000826
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049770.1 hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa]2.5e-1045.57Show/hide
Query:  KRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        K + V  F+ S    FCCLLETRV    FAS+ + F + W    SYS    GRIWVMW+ NR+ F+   +  Q+V GTL
Subjt:  KRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

KAA0062319.1 hypothetical protein E6C27_scaffold154G00700 [Cucumis melo var. makuwa]1.3e-0944.3Show/hide
Query:  KRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        K + V  F+ S    FCCLLETRV    F S+ + F + W    SYS    GRIWVMW+ NR+ F+   +  Q+V GTL
Subjt:  KRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]9.6e-1041.18Show/hide
Query:  GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        G+ +  K + V  F+ S    FCCLLETRV    F  + + F + W    SYS    GRIWV+W+ NR+ F+   V  Q+V GTL
Subjt:  GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

XP_038888122.1 uncharacterized protein LOC120078021 [Benincasa hispida]4.6e-1244.71Show/hide
Query:  GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        GLN   K R V  F++S    FC LL+TRV R  F  +   F D+W CV SYSV   GRIW+MW+ + Y F+      Q+++GTL
Subjt:  GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

XP_038895804.1 uncharacterized protein LOC120083970 [Benincasa hispida]4.2e-1348.24Show/hide
Query:  GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        GLN   K R V  F++S    F CLLETRV R  F  +   F D W C+ SYSV   GRIWVMWR + Y F+      Q++YGTL
Subjt:  GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

TrEMBL top hitse value%identityAlignment
A0A5A7SPE5 Reverse transcriptase domain-containing protein1.8e-0946.05Show/hide
Query:  EVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        +V + ISS    FCCLLETRV    F S+ + F++ W    SYS    GRIWVMW+ NR+ F+   +  Q+V GTL
Subjt:  EVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein1.0e-0942.86Show/hide
Query:  LNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        L    K + V  F+ S    FCCLLETRV    F ++ + F + W    SYS  D GRIWVMW+ NR+ F+   V  Q+V  TL
Subjt:  LNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

A0A5A7U3C2 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein1.2e-1045.57Show/hide
Query:  KRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        K + V  F+ S    FCCLLETRV    FAS+ + F + W    SYS    GRIWVMW+ NR+ F+   +  Q+V GTL
Subjt:  KRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein4.7e-1041.18Show/hide
Query:  GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        G+ +  K + V  F+ S    FCCLLETRV    F  + + F + W    SYS    GRIWV+W+ NR+ F+   V  Q+V GTL
Subjt:  GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

A0A5A7V9D6 Uncharacterized protein6.1e-1044.3Show/hide
Query:  KRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL
        K + V  F+ S    FCCLLETRV    F S+ + F + W    SYS    GRIWVMW+ NR+ F+   +  Q+V GTL
Subjt:  KRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCTTGAATACCTCCACGAAACGTAGAGAGGTACGCACGTTTATCTCTTCGATATGTTCAGATTTCTGTTGTTTGTTGGAAACAAGGGTTCTTCGTCATACTTTTGCCTC
CATTTTCCAGCCCTTTGCGGATCAGTGGCAGTGTGTTAGTAGTTACAGTGTTGTGGATTTTGGGAGGATTTGGGTGATGTGGCGTCCCAATCGCTATGTTTTCACTCCCA
TTACTGTGTCTTCTCAATATGTGTATGGGACCCTGTTT
mRNA sequenceShow/hide mRNA sequence
GGCTTGAATACCTCCACGAAACGTAGAGAGGTACGCACGTTTATCTCTTCGATATGTTCAGATTTCTGTTGTTTGTTGGAAACAAGGGTTCTTCGTCATACTTTTGCCTC
CATTTTCCAGCCCTTTGCGGATCAGTGGCAGTGTGTTAGTAGTTACAGTGTTGTGGATTTTGGGAGGATTTGGGTGATGTGGCGTCCCAATCGCTATGTTTTCACTCCCA
TTACTGTGTCTTCTCAATATGTGTATGGGACCCTGTTT
Protein sequenceShow/hide protein sequence
GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTLF