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MS000835 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000835
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationscaffold236:440326..440463
RNA-Seq ExpressionMS000835
SyntenyMS000835
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]1.8e-0771.74Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
        MASKI+FLV L AFL + S ARKL+T SF D+KFF RP FGGGGLG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
KAA0065825.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]1.4e-0771.74Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
        MASKI+FLV L AFL T S ARKL+T SF D+KFF RP +GGGGLG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
XP_011650511.1 glycine-rich cell wall structural protein-like [Cucumis sativus]4.8e-0873.91Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
        MASKI+FLV L AFL + S ARKL+T SF D+KFFRRP FGGGGLG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
XP_022151305.1 glycine-rich protein 5 [Momordica charantia]2.6e-1493.48Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
        MASKILFLVLLSAFLCT SWARKLTTTSFHDQKFF RPGFGGGG G
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
TrEMBL top hitse value%identityAlignment
A0A0A0L2A7 Uncharacterized protein2.3e-0873.91Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
        MASKI+FLV L AFL + S ARKL+T SF D+KFFRRP FGGGGLG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
A0A5A7VJD1 Glycine-rich cell wall structural protein-like6.8e-0871.74Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
        MASKI+FLV L AFL T S ARKL+T SF D+KFF RP +GGGGLG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
A0A5D3BB90 Glycine-rich cell wall structural protein-like8.9e-0871.74Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
        MASKI+FLV L AFL + S ARKL+T SF D+KFF RP FGGGGLG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
A0A6J1DAT8 glycine-rich protein 51.3e-1493.48Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
        MASKILFLVLLSAFLCT SWARKLTTTSFHDQKFF RPGFGGGG G
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCAATTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCGCCG
TCCCGGATTTGGCGGTGGTGGGCTGGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCAATTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCGCCG
TCCCGGATTTGGCGGTGGTGGGCTGGGT
Protein sequenceShow/hide protein sequence
MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLG