; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000837 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000837
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationscaffold236:448934..449407
RNA-Seq ExpressionMS000837
SyntenyMS000837
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]1.0e-1278.88Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG
        MASKI+FLV L AFL + S ARKL+T SF D+KFF RP FGGGGLGGGGGGGFGGGGGGGL    GGGFGGGSGFGGG GGGAGG  GGGFGGGGGGG+G
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG

Query:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
        GG G GGGA  GFGGG+G GGGL  GGGAGGGGGFGGG GGGLGGG+  GFGGGAGAGGG+
Subjt:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
KAA0065825.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]2.2e-1580.75Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG
        MASKI+FLV L AFL T S ARKL+T SF D+KFF RP +GGGGLGGGGGGGFGGGGGGGL    GGGFGGGSGFGGG GGGAGGG GGGFGGGGGGGLG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG

Query:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
        GG G GGGA  GFGGG+G GGGLGGGGGAGGGGGFGGG GGGLGGG+  GFG GAG GGGF
Subjt:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
XP_002529919.2 glycine-rich protein 5 [Ricinus communis]1.3e-0775Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTT--TSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL--GGGFGGGSGFGGGAGGGAGG------GAGGGFGGG
        MASK+  ++LL AF+CT++ AR L +   SF D+KFFRRP   GGGLGGGGGGGFGGGGGGGL  GGG GGG+GFGGGAGGGAGG      G GGGFGGG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTT--TSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL--GGGFGGGSGFGGGAGGGAGG------GAGGGFGGG

Query:  GGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFGGG
        GGGGLGGG G GGGAGGGFGGGAGAGGGL  GGGAGGGGGFGGG GGGLGGG+  GGG GAGGG GGG
Subjt:  GGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFGGG
XP_011650511.1 glycine-rich cell wall structural protein-like [Cucumis sativus]1.6e-1581.99Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG
        MASKI+FLV L AFL + S ARKL+T SF D+KFFRRP FGGGGLGGGGGGGFGGGGGGGL    GGGFGGGSGFGGG GGGAGGG GGGFGGGGGGGLG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG

Query:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
        GG G GGGA  GFGG  G+GGGLGGGGGAGGGGGFGGG GGGLGGG+  GFGGGAGAGGGF
Subjt:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
XP_022151305.1 glycine-rich protein 5 [Momordica charantia]1.1e-2794.94Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGG
        MASKILFLVLLSAFLCT SWARKLTTTSFHDQKFF RPGFG    GGGGGGGFGGGGGGGLGGGFGGGSGFGGGAGGGAGGGAGGGF GGGGGGLGGGGG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGG

Query:  IGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFGGG
        IGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGG GGGLGGGSGFGGGAGAGGGFGGG
Subjt:  IGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFGGG
TrEMBL top hitse value%identityAlignment
A0A0A0L2A7 Uncharacterized protein2.4e-1266.34Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGL-
        MASKI+FLV L AFL + S ARKL+T SF D+KFFRRP FGGGGLGGGGGGGFGGGGGGGL    GGGFGGGSGFGGG GGGAGGG GGGFGGGGGGGL 
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGL-

Query:  ---------------------------------------GGGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFG
                                               GGGGG+GGG+GGGFGGG+G GGG+GGG G GGGGGFGGG GGGLGGGSGFGGGAG GGG G
Subjt:  ---------------------------------------GGGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFG

Query:  GG
        GG
Subjt:  GG
A0A5A7VJD1 Glycine-rich cell wall structural protein-like1.0e-1580.75Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG
        MASKI+FLV L AFL T S ARKL+T SF D+KFF RP +GGGGLGGGGGGGFGGGGGGGL    GGGFGGGSGFGGG GGGAGGG GGGFGGGGGGGLG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG

Query:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
        GG G GGGA  GFGGG+G GGGLGGGGGAGGGGGFGGG GGGLGGG+  GFG GAG GGGF
Subjt:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
A0A5D3BB90 Glycine-rich cell wall structural protein-like4.8e-1378.88Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG
        MASKI+FLV L AFL + S ARKL+T SF D+KFF RP FGGGGLGGGGGGGFGGGGGGGL    GGGFGGGSGFGGG GGGAGG  GGGFGGGGGGG+G
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL----GGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLG

Query:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
        GG G GGGA  GFGGG+G GGGL  GGGAGGGGGFGGG GGGLGGG+  GFGGGAGAGGG+
Subjt:  GGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGS--GFGGGAGAGGGF
A0A6J1DAT8 glycine-rich protein 55.3e-2894.94Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGG
        MASKILFLVLLSAFLCT SWARKLTTTSFHDQKFF RPGFG    GGGGGGGFGGGGGGGLGGGFGGGSGFGGGAGGGAGGGAGGGF GGGGGGLGGGGG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGG

Query:  IGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFGGG
        IGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGG GGGLGGGSGFGGGAGAGGGFGGG
Subjt:  IGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFGGG
B9SVA0 GRP3S, putative6.1e-0875Show/hide
Query:  MASKILFLVLLSAFLCTNSWARKLTT--TSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL--GGGFGGGSGFGGGAGGGAGG------GAGGGFGGG
        MASK+  ++LL AF+CT++ AR L +   SF D+KFFRRP   GGGLGGGGGGGFGGGGGGGL  GGG GGG+GFGGGAGGGAGG      G GGGFGGG
Subjt:  MASKILFLVLLSAFLCTNSWARKLTT--TSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGL--GGGFGGGSGFGGGAGGGAGG------GAGGGFGGG

Query:  GGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFGGG
        GGGGLGGG G GGGAGGGFGGGAGAGGGL  GGGAGGGGGFGGG GGGLGGG+  GGG GAGGG GGG
Subjt:  GGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFGGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCAATTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCGCCG
TCCCGGATTTGGCGGTGGTGGGCTGGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGCGGCGGTGGAGGGCTAGGCGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGAG
GCGCTGGCGGTGGTGCTGGTGGTGGTGCTGGAGGCGGGTTCGGAGGAGGAGGTGGCGGTGGACTAGGAGGAGGTGGTGGCATTGGTGGCGGAGCTGGTGGCGGGTTCGGA
GGAGGGGCCGGTGCAGGAGGAGGACTTGGTGGTGGCGGTGGAGCTGGAGGAGGTGGAGGTTTTGGTGGCGGCAGCGGAGGTGGACTTGGGGGTGGCAGTGGGTTCGGCGG
AGGCGCCGGTGCCGGAGGTGGATTTGGAGGTGGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAGATTCTCTTTCTTGTGCTTCTTTCTGCTTTTCTCTGCACCAATTCTTGGGCTCGAAAGCTCACTACTACCTCTTTTCACGACCAGAAATTCTTCCGCCG
TCCCGGATTTGGCGGTGGTGGGCTGGGTGGTGGAGGCGGTGGAGGGTTCGGCGGAGGCGGCGGTGGAGGGCTAGGCGGTGGTTTTGGTGGAGGATCTGGATTTGGCGGAG
GCGCTGGCGGTGGTGCTGGTGGTGGTGCTGGAGGCGGGTTCGGAGGAGGAGGTGGCGGTGGACTAGGAGGAGGTGGTGGCATTGGTGGCGGAGCTGGTGGCGGGTTCGGA
GGAGGGGCCGGTGCAGGAGGAGGACTTGGTGGTGGCGGTGGAGCTGGAGGAGGTGGAGGTTTTGGTGGCGGCAGCGGAGGTGGACTTGGGGGTGGCAGTGGGTTCGGCGG
AGGCGCCGGTGCCGGAGGTGGATTTGGAGGTGGA
Protein sequenceShow/hide protein sequence
MASKILFLVLLSAFLCTNSWARKLTTTSFHDQKFFRRPGFGGGGLGGGGGGGFGGGGGGGLGGGFGGGSGFGGGAGGGAGGGAGGGFGGGGGGGLGGGGGIGGGAGGGFG
GGAGAGGGLGGGGGAGGGGGFGGGSGGGLGGGSGFGGGAGAGGGFGGG