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MS000870 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000870
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold650:433482..433649
RNA-Seq ExpressionMS000870
SyntenyMS000870
Gene Ontology termsGO:0006950 - response to stress (biological process)
GO:0009987 - cellular process (biological process)
GO:0050789 - regulation of biological process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5575660.1 hypothetical protein H5410_055794 [Solanum commersonii]1.9e-0645.45Show/hide
Query:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRREI
        NG K RFWKD W+G++     FPDL  +    E  VAECW+   + W+L FRR +
Subjt:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRREI

MCH99327.1 ribonuclease H protein [Trifolium medium]3.8e-0746.43Show/hide
Query:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQND-WDLGFRREI
        NG++  FWKDKWVGDT+    FP LF+I  +++  VA  WN D ++ W+L +RR +
Subjt:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQND-WDLGFRREI

RVW76081.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.4e-0647.37Show/hide
Query:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNAD--QNDWDLGFRREI
        NGQ++RFWKDKW GD     +FP LF I + ++A V+E WN D   + W L F R +
Subjt:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNAD--QNDWDLGFRREI

XP_022149391.1 uncharacterized protein LOC111017819 [Momordica charantia]6.9e-0953.85Show/hide
Query:  GQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR
        G +IRFW DKW G+ +    FPDL+ I +K+EA VA+CW+     WDLGFRR
Subjt:  GQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]2.9e-0742.59Show/hide
Query:  NNGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR
        N G ++ FW DKW G+      FPD+F + +K+ A V +CWN +   WDL  RR
Subjt:  NNGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR

TrEMBL top hitse value%identityAlignment
A0A0V0HST9 Putative ovule protein1.1e-0749.06Show/hide
Query:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR
        NG KI+FW+D W+     + +FPDLF+I    EA+V ECW      WDL FRR
Subjt:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR

A0A0V0IX13 Putative ovule protein5.3e-0748.15Show/hide
Query:  NNGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR
        +NG + RFWKDKW+G  S    FPDLF++   +   VAE W   Q  WD+ FRR
Subjt:  NNGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR

A0A392NHI5 Ribonuclease H protein (Fragment)1.8e-0746.43Show/hide
Query:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQND-WDLGFRREI
        NG++  FWKDKWVGDT+    FP LF+I  +++  VA  WN D ++ W+L +RR +
Subjt:  NGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQND-WDLGFRREI

A0A6J1D884 uncharacterized protein LOC1110178193.3e-0953.85Show/hide
Query:  GQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR
        G +IRFW DKW G+ +    FPDL+ I +K+EA VA+CW+     WDLGFRR
Subjt:  GQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR

A0A6J1E196 uncharacterized protein LOC1110250191.4e-0742.59Show/hide
Query:  NNGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR
        N G ++ FW DKW G+      FPD+F + +K+ A V +CWN +   WDL  RR
Subjt:  NNGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATAATGGGCAGAAAATCAGATTCTGGAAAGATAAATGGGTGGGTGACACCTCTTTTAATCTAGCTTTTCCAGATCTTTTCAATATTTATATGAAGGAGGAGGCCAAGGT
GGCTGAATGCTGGAATGCAGATCAGAATGACTGGGATTTGGGCTTCAGAAGGGAGATT
mRNA sequenceShow/hide mRNA sequence
AATAATGGGCAGAAAATCAGATTCTGGAAAGATAAATGGGTGGGTGACACCTCTTTTAATCTAGCTTTTCCAGATCTTTTCAATATTTATATGAAGGAGGAGGCCAAGGT
GGCTGAATGCTGGAATGCAGATCAGAATGACTGGGATTTGGGCTTCAGAAGGGAGATT
Protein sequenceShow/hide protein sequence
NNGQKIRFWKDKWVGDTSFNLAFPDLFNIYMKEEAKVAECWNADQNDWDLGFRREI