; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000899 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000899
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA-binding protein 48
Genome locationscaffold36:150137..154505
RNA-Seq ExpressionMS000899
SyntenyMS000899
Gene Ontology termsGO:0005654 - nucleoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034264 - RBM48, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR039599 - RNA-binding protein 48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598220.1 RNA-binding protein 48, partial [Cucurbita argyrosperma subsp. sororia]2.6e-10787.61Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARL+ GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        +IQS SE L+AGPVSK+SRVDNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

XP_022132316.1 RNA-binding protein 48-like [Momordica charantia]8.4e-122100Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        QIQSSSEHLQAGPVSKKSRVDNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

XP_022152542.1 RNA-binding protein 48-like [Momordica charantia]1.6e-10989.82Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYT+E PAVRVY ICDESR+LIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYF+KFHLV NARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARL+ GRSKGS+VRST T L+NP+HSHY LEQK SLEKRNYGDAALI+NP VSQMTKVSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        +IQSSSEHL+ GP+SKKSRVDNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

XP_022961642.1 RNA-binding protein 48 isoform X1 [Cucurbita moschata]6.2e-10988.5Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLN GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        +IQS SEHL+AGPVSK+SRVDNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

XP_022997621.1 RNA-binding protein 48 isoform X1 [Cucurbita maxima]2.4e-10888.05Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARL+ GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        +IQS SEHL+AGPVSK+SRVDNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

TrEMBL top hitse value%identityAlignment
A0A5A7V5K4 RNA-binding protein 482.7e-10284.51Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPR+ +EP AVR Y +CDESRYLIVRNVPALGCGD L KLFSSYGN+EECKPMDAEECDEFTDVYF+KFH V NARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESL+DTKEKLEVRRREVLARL+ GR +GS+V ST   L+NPS S+Y LEQK SLE RNYGDAALIS+P VSQMT+VSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        +IQSSSEHLQAGP SKKSR+DNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

A0A6J1BRX6 RNA-binding protein 484.1e-122100Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        QIQSSSEHLQAGPVSKKSRVDNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

A0A6J1DGJ2 RNA-binding protein 488.0e-11089.82Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYT+E PAVRVY ICDESR+LIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYF+KFHLV NARFAKRKLDEFVFLGNRLQVSYAPEF
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARL+ GRSKGS+VRST T L+NP+HSHY LEQK SLEKRNYGDAALI+NP VSQMTKVSSDQD+FASESMN+TVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        +IQSSSEHL+ GP+SKKSRVDNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

A0A6J1HAQ6 RNA-binding protein 483.0e-10988.5Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARLN GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        +IQS SEHL+AGPVSK+SRVDNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

A0A6J1K7Z4 RNA-binding protein 481.1e-10888.05Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        MPRYTNEPPAVRVY ICDESRYLIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDEFTDVYF+KFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+F
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD
        ESLLDTKEKLEVRRREVLARL+ GR +GS+V S  T  +NPSHSHY LEQK SLEKRNYGDAAL SNP VSQ+T+VSSDQDYFASESMNQTVHLVREKLD
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLD

Query:  QIQSSSEHLQAGPVSKKSRVDNRRRI
        +IQS SEHL+AGPVSK+SRVDNRRRI
Subjt:  QIQSSSEHLQAGPVSKKSRVDNRRRI

SwissProt top hitse value%identityAlignment
A4FVJ7 RNA-binding protein 488.4e-2438.24Show/hide
Query:  AVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK
        AV+VY I  ESRYL+V+ VPA+G   +L++LF+ YG +EE +P+D    ++FT+VY I+F  + +AR AKR  DE  F G +L V YAPE+E++ +TK+K
Subjt:  AVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEK

Query:  LEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSD
        L+ RRR V    N      + + S   +++  S S        S + R      +  NP  ++   V+SD
Subjt:  LEVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSD

Q561R3 RNA-binding protein 481.0e-2144.64Show/hide
Query:  RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFES
        R    P AV+VY I  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY IKF  + +AR AK+K+DE  F G  L V YAPEFE+
Subjt:  RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFES

Query:  LLDTKEKLEVRR
        + +T++KLE R+
Subjt:  LLDTKEKLEVRR

Q5R4U2 RNA-binding protein 482.1e-2244.83Show/hide
Query:  RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFES
        R    P AV+VY I  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY IKF  + +AR AKRK+DE  F G  L V YAPEFE+
Subjt:  RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFES

Query:  LLDTKEKLEVRRREVL
        + +T++KL+VR+  V+
Subjt:  LLDTKEKLEVRRREVL

Q5RL73 RNA-binding protein 487.9e-2243.97Show/hide
Query:  RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFES
        R    P AV+VY I  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY IKF  + +AR AKRK+DE  F G  L V YAPEFE+
Subjt:  RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFES

Query:  LLDTKEKLEVRRREVL
        + +T++KL++R+  V+
Subjt:  LLDTKEKLEVRRREVL

Q8K2X2 RNA-binding protein 483.0e-2143.75Show/hide
Query:  RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFES
        R    P AV+VY I  ES+YL+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY IKF  + +AR AK+K+DE  F G  L V YAPEFE+
Subjt:  RYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFES

Query:  LLDTKEKLEVRR
        + +T++KL+ R+
Subjt:  LLDTKEKLEVRR

Arabidopsis top hitse value%identityAlignment
AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-6453.73Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        M RY +E PAVRVY +CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY+IKF L+ NARFAKRKLDE  FLGNRLQ+SYAPE+
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHL
        E++ DTK+KLE RR+EVLARLN  + K +   S  T L+ P      + S    E +Y   + N            + +T+VSSDQ+YFAS SMNQTV  
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHL

Query:  VREKLDQIQSSSEHLQAGPVS-----------------------KKSRVDNRRRI
        VREKL++I+ S    +  P S                       K++RVDNRRRI
Subjt:  VREKLDQIQSSSEHLQAGPVS-----------------------KKSRVDNRRRI

AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-6453.73Show/hide
Query:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF
        M RY +E PAVRVY +CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY+IKF L+ NARFAKRKLDE  FLGNRLQ+SYAPE+
Subjt:  MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEF

Query:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHL
        E++ DTK+KLE RR+EVLARLN  + K +   S  T L+ P      + S    E +Y   + N            + +T+VSSDQ+YFAS SMNQTV  
Subjt:  ESLLDTKEKLEVRRREVLARLNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHL

Query:  VREKLDQIQSSSEHLQAGPVS-----------------------KKSRVDNRRRI
        VREKL++I+ S    +  P S                       K++RVDNRRRI
Subjt:  VREKLDQIQSSSEHLQAGPVS-----------------------KKSRVDNRRRI

AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein6.5e-5654.91Show/hide
Query:  AICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR
        ++CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY+IKF L+ NA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR
Subjt:  AICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR

Query:  REVLARLNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLDQIQSSSEH
        +EVLARLN  ++K +   S  T L+ P      + S    E  Y   + N            + +T+VSS Q+YFAS SMNQ V  VREKL++I+ S   
Subjt:  REVLARLNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLDQIQSSSEH

Query:  LQAGPVS------KKSRVDNRRRI
         +  P S      K++RVDNRRRI
Subjt:  LQAGPVS------KKSRVDNRRRI

AT5G27300.2 pentatricopeptide (PPR) repeat-containing protein6.5e-5654.91Show/hide
Query:  AICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR
        ++CDESRY+IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY+IKF L+ NA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR
Subjt:  AICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR

Query:  REVLARLNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLDQIQSSSEH
        +EVLARLN  ++K +   S  T L+ P      + S    E  Y   + N            + +T+VSS Q+YFAS SMNQ V  VREKL++I+ S   
Subjt:  REVLARLNLGRSKGSSVRSTATDLSNP------SHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLDQIQSSSEH

Query:  LQAGPVS------KKSRVDNRRRI
         +  P S      K++RVDNRRRI
Subjt:  LQAGPVS------KKSRVDNRRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCTACACAAATGAGCCCCCTGCGGTTCGCGTCTATGCGATTTGCGACGAGTCAAGGTATTTGATTGTAAGGAATGTTCCGGCATTGGGTTGCGGAGATGACTT
GCTCAAATTGTTTTCCTCCTACGGAAACGTTGAAGAGTGTAAACCAATGGATGCAGAAGAATGCGATGAATTTACAGATGTTTATTTTATCAAATTTCACTTGGTTAACA
ATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTCGATACAAAAGAAAAGCTA
GAAGTCAGGAGACGAGAAGTTTTAGCACGATTGAATCTTGGAAGATCAAAGGGATCCTCAGTCAGATCAACTGCCACAGATCTTTCAAATCCTTCACACTCTCATTATGC
ACTTGAACAGAAGTACTCTCTTGAAAAGAGGAATTATGGAGATGCAGCACTCATTTCCAACCCACGTGTTTCTCAAATGACAAAAGTATCCTCCGACCAGGATTACTTCG
CATCTGAATCTATGAATCAAACTGTACATCTCGTCAGGGAAAAGCTTGATCAGATTCAATCAAGCAGTGAACATCTGCAAGCTGGACCCGTGAGCAAGAAGTCACGTGTG
GACAACAGAAGGAGAATT
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCTACACAAATGAGCCCCCTGCGGTTCGCGTCTATGCGATTTGCGACGAGTCAAGGTATTTGATTGTAAGGAATGTTCCGGCATTGGGTTGCGGAGATGACTT
GCTCAAATTGTTTTCCTCCTACGGAAACGTTGAAGAGTGTAAACCAATGGATGCAGAAGAATGCGATGAATTTACAGATGTTTATTTTATCAAATTTCACTTGGTTAACA
ATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTCGATACAAAAGAAAAGCTA
GAAGTCAGGAGACGAGAAGTTTTAGCACGATTGAATCTTGGAAGATCAAAGGGATCCTCAGTCAGATCAACTGCCACAGATCTTTCAAATCCTTCACACTCTCATTATGC
ACTTGAACAGAAGTACTCTCTTGAAAAGAGGAATTATGGAGATGCAGCACTCATTTCCAACCCACGTGTTTCTCAAATGACAAAAGTATCCTCCGACCAGGATTACTTCG
CATCTGAATCTATGAATCAAACTGTACATCTCGTCAGGGAAAAGCTTGATCAGATTCAATCAAGCAGTGAACATCTGCAAGCTGGACCCGTGAGCAAGAAGTCACGTGTG
GACAACAGAAGGAGAATT
Protein sequenceShow/hide protein sequence
MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKL
EVRRREVLARLNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQDYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRV
DNRRRI