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MS000902 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000902
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant protein 1589 of Uncharacterized protein function
Genome locationscaffold36:165445..165881
RNA-Seq ExpressionMS000902
SyntenyMS000902
Gene Ontology termsNA
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444348.1 PREDICTED: uncharacterized protein LOC103487701 [Cucumis melo]2.1e-3380.95Show/hide
Query:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        MY  +   FLPCFHC PHAYIRMVQHLIERCLLLHMS DEC KALAHHANIRPLITLTVW+ELQKEN++FFR+YFH ISP P L
Subjt:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

XP_022132210.1 uncharacterized protein LOC111005125 [Momordica charantia]2.2e-43100Show/hide
Query:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
Subjt:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

XP_022997625.1 uncharacterized protein LOC111492501 isoform X1 [Cucurbita maxima]2.3e-3283.33Show/hide
Query:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        MY YSH QFLPCFHCHP AYIRMVQHLIERCLLLHMS DEC KALAHHANIRPLIT TVW+ELQKEN EFFR+YF  IS  P L
Subjt:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

XP_038884418.1 uncharacterized protein LOC120075271 isoform X1 [Benincasa hispida]3.5e-3382.72Show/hide
Query:  YSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        ++H   +PCFHCHPHAYIRMVQHLIERCLLLHMS DEC KALAHHANIRPLITLTVW+ELQKEN+EFFR+YFH ISP P L
Subjt:  YSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

XP_038884419.1 uncharacterized protein LOC120075271 isoform X2 [Benincasa hispida]3.5e-3382.72Show/hide
Query:  YSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        ++H   +PCFHCHPHAYIRMVQHLIERCLLLHMS DEC KALAHHANIRPLITLTVW+ELQKEN+EFFR+YFH ISP P L
Subjt:  YSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

TrEMBL top hitse value%identityAlignment
A0A0A0LMP2 Uncharacterized protein1.5e-3279.76Show/hide
Query:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        MY  +   FLPCFHC PHAYIRMVQHLIERCLLLHMS DEC KALA HANIRPLITLTVW+ELQKEN++FFR+YFH ISP P L
Subjt:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

A0A1S3BA39 uncharacterized protein LOC1034877011.0e-3380.95Show/hide
Query:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        MY  +   FLPCFHC PHAYIRMVQHLIERCLLLHMS DEC KALAHHANIRPLITLTVW+ELQKEN++FFR+YFH ISP P L
Subjt:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

A0A6J1BRT4 uncharacterized protein LOC1110051251.1e-43100Show/hide
Query:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
Subjt:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

A0A6J1K802 uncharacterized protein LOC111492501 isoform X21.1e-3283.33Show/hide
Query:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        MY YSH QFLPCFHCHP AYIRMVQHLIERCLLLHMS DEC KALAHHANIRPLIT TVW+ELQKEN EFFR+YF  IS  P L
Subjt:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

A0A6J1KA89 uncharacterized protein LOC111492501 isoform X11.1e-3283.33Show/hide
Query:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        MY YSH QFLPCFHCHP AYIRMVQHLIERCLLLHMS DEC KALAHHANIRPLIT TVW+ELQKEN EFFR+YF  IS  P L
Subjt:  MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.1 Plant protein 1589 of unknown function3.2e-2451.52Show/hide
Query:  LPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLT------------------------VWRELQKENTEFFRSYFHAISPKPLL
        LPC HC PH+YIRMVQH+IERC+LL M+ DEC KAL HHA+I PL+TLT                        VWR LQ+EN +FF +Y H +SP+P L
Subjt:  LPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLT------------------------VWRELQKENTEFFRSYFHAISPKPLL

AT1G10657.2 Plant protein 1589 of unknown function2.8e-2868Show/hide
Query:  LPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        LPC HC PH+YIRMVQH+IERC+LL M+ DEC KAL HHA+I PL+TLTVWR LQ+EN +FF +Y H +SP+P L
Subjt:  LPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

AT1G10657.3 Plant protein 1589 of unknown function2.8e-2868Show/hide
Query:  LPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL
        LPC HC PH+YIRMVQH+IERC+LL M+ DEC KAL HHA+I PL+TLTVWR LQ+EN +FF +Y H +SP+P L
Subjt:  LPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL

AT1G10657.4 Plant protein 1589 of unknown function7.1e-2470.31Show/hide
Query:  LPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRS
        LPC HC PH+YIRMVQH+IERC+LL M+ DEC KAL HHA+I PL+TLTVWR LQ+EN +FF +
Subjt:  LPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRS

AT3G55240.1 Plant protein 1589 of unknown function3.4e-1864.29Show/hide
Query:  AYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSY
        +YI MVQH+IE+CL+ HMS +EC +AL+ HANI P+IT TVW+EL+KEN EFF++Y
Subjt:  AYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCTTACAGCCACGGTCAGTTTCTCCCTTGTTTTCATTGCCACCCCCATGCCTATATCCGGATGGTCCAACATCTTATAGAGAGATGCTTGCTACTTCATATGAG
CCCGGATGAGTGCGCAAAGGCATTGGCTCACCATGCAAATATTCGCCCTCTCATAACACTTACAGTGTGGAGAGAGCTCCAAAAAGAAAACACTGAATTCTTCCGCTCAT
ATTTCCATGCTATTTCTCCCAAACCATTACTG
mRNA sequenceShow/hide mRNA sequence
ATGTACTCTTACAGCCACGGTCAGTTTCTCCCTTGTTTTCATTGCCACCCCCATGCCTATATCCGGATGGTCCAACATCTTATAGAGAGATGCTTGCTACTTCATATGAG
CCCGGATGAGTGCGCAAAGGCATTGGCTCACCATGCAAATATTCGCCCTCTCATAACACTTACAGTGTGGAGAGAGCTCCAAAAAGAAAACACTGAATTCTTCCGCTCAT
ATTTCCATGCTATTTCTCCCAAACCATTACTG
Protein sequenceShow/hide protein sequence
MYSYSHGQFLPCFHCHPHAYIRMVQHLIERCLLLHMSPDECAKALAHHANIRPLITLTVWRELQKENTEFFRSYFHAISPKPLL