; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000907 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000907
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhomeobox protein knotted-1-like 6
Genome locationscaffold36:206887..218835
RNA-Seq ExpressionMS000907
SyntenyMS000907
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR005539 - ELK domain
IPR005540 - KNOX1
IPR005541 - KNOX2
IPR008422 - Homeobox KN domain
IPR009057 - Homeobox-like domain superfamily
IPR017970 - Homeobox, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029210.1 Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-12978.71Show/hide
Query:  FAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDC
        + +RST  +S  SFLSP      LDY +FL ST++  RDRIP+FGS EL      + EAE  SITP FPL  DV S+I  KAKI+SHPTYPRLLHAYIDC
Subjt:  FAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDC

Query:  QKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNW
         KVGAPPEIA LLEEIRREN   KQ+A+STCFG DPELDEFMETYC+MLVKYKSDLS PF+EASSFL+NIELQLS+LCAGAS RS SNEDAMSSDDELNW
Subjt:  QKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNW

Query:  GERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPS
        GERE+Q AQM LEDK LKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EWWNVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPS
Subjt:  GERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPS

Query:  ESMQLATVDN
        ESMQ A++D+
Subjt:  ESMQLATVDN

XP_022131305.1 homeobox protein knotted-1-like 6 [Momordica charantia]1.6e-171100Show/hide
Query:  DMFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKV
        DMFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKV
Subjt:  DMFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKV

Query:  GAPPEIAGLLEEIRRENKQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQ
        GAPPEIAGLLEEIRRENKQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQ
Subjt:  GAPPEIAGLLEEIRRENKQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQ

Query:  GAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLA
        GAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLA
Subjt:  GAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLA

Query:  TVDN
        TVDN
Subjt:  TVDN

XP_022997562.1 homeobox protein knotted-1-like 6 [Cucurbita maxima]4.6e-13179.17Show/hide
Query:  DMFAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI
        +M+ +RST  +S KSFLSP      LDY +FL ST++  RDRIP+FGS EL      +SEAE PSITP FPL  DV ++I  KAKI+SHPTYPRLLHAYI
Subjt:  DMFAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI

Query:  DCQKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDEL
        DC KVGAPPEIA LLEEIRREN   KQ+AISTCFG DPELDEFMETYC+MLVKYKSDLS PF+EASSFL++IELQLS+LCAGAS RS SNEDAMSSDDEL
Subjt:  DCQKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDEL

Query:  NWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWK
        NWGERE+Q AQM LEDK LKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EWWNVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWK
Subjt:  NWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWK

Query:  PSESMQLATVDN
        PSESMQ A++D+
Subjt:  PSESMQLATVDN

XP_023546842.1 homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo]2.3e-13078.85Show/hide
Query:  DMFAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI
        +M+ +RST  +S KSFL P      LDY +FL ST++  RDRIP+FGS EL      +SE E PSITP FPL  DV SVI  KA+I+SHPTYPRLLHAYI
Subjt:  DMFAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI

Query:  DCQKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDEL
        DC KVGAPPEIA LLEEIRREN   KQ+A+STCFG DPELDEFMETYC+MLVKYKSDLS PF+EASSFL+NIELQLS+LCAGAS RS SNEDAMSSDDEL
Subjt:  DCQKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDEL

Query:  NWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWK
        NWGERE+Q AQM LEDK LKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EWWNVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWK
Subjt:  NWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWK

Query:  PSESMQLATVDN
        PSESMQ A++D+
Subjt:  PSESMQLATVDN

XP_038885812.1 homeobox protein knotted-1-like 6 [Benincasa hispida]6.0e-13182.81Show/hide
Query:  LDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRREN---KQ
        LDY + LSS++FRDRIP+FGS EL S+ SA+SEAEAPS TP FPL  DV  +   KAKI+SHP YPRLLHAYIDCQKVGAPPEIA LLEEIRREN   KQ
Subjt:  LDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRREN---KQ

Query:  HAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQGAQMSLEDKSLKDMLLSRF
        + I+TCFGADPELDEFME YC+MLVKYKSDLS PF+EASSFLNNI+LQL +LCAGAS RSPSNEDAMSSDDELNWGERELQ  QM LEDK LKDMLLSRF
Subjt:  HAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQGAQMSLEDKSLKDMLLSRF

Query:  GSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVDN
        GSHIGTLKLEFSKKKKKGKLPKEGRKVL +WWNVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPSESMQ   +DN
Subjt:  GSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVDN

TrEMBL top hitse value%identityAlignment
A0A1S3BA77 homeobox protein knotted-1-like 67.1e-12278.67Show/hide
Query:  KSFLSPDNL---LDYHSFLSSTSF-RDRIPIFGSHELPS-AASAVSEAEAPSITPAFPL-QPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIA
        KSFL  DNL   LDY + L ST+  RDRIP+FGSHEL S   S++S+AE PS T  F L + DVLSV   KAKIVSHP YPRLLHAYIDCQKVGAPPEIA
Subjt:  KSFLSPDNL---LDYHSFLSSTSF-RDRIPIFGSHELPS-AASAVSEAEAPSITPAFPL-QPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIA

Query:  GLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQGAQM
         LLEEIRREN   +Q+AISTCFGADPELDEFME YC+ML+KYKSDLS PF+EA SFLNNI+LQL +L AGAS  +PSNEDAMSSDDELN GERELQ  QM
Subjt:  GLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQGAQM

Query:  SLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVDN
         LEDK LKDMLLSRFG HIGTLKLEFSKKKKKGKLPKEGRKVL EWW+VHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPSESMQ   +DN
Subjt:  SLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVDN

A0A5D3CW74 Homeobox protein knotted-1-like 67.4e-11168.79Show/hide
Query:  DMFAIRSTADYSAKSFLSPDNLL---DYHSFL-SSTSFRDRIPIFGSHELPS-AASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI
        +M+ ++STA+YS K+ +SP+NL+   DY S L SS  FRDRIP+FGS+EL S AASA+SEAEA SITP    + D+++VI  KAKI SHPTYPRLL AYI
Subjt:  DMFAIRSTADYSAKSFLSPDNLL---DYHSFL-SSTSFRDRIPIFGSHELPS-AASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI

Query:  DCQKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDEL
        DCQKVGAPPEIA LLE IR+E+    +HA++TC G DPELDEFMETYC+MLVKYKSDL  PF EA++FLN IELQLS+LC GA +RS S++ A+SSD+EL
Subjt:  DCQKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDEL

Query:  NWGEREL--QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRH
        + GE E+    AQ   E++ LKD LL RFGSHI TLKLEFSKKKKKGKLPKE R+ L EWWNVHYKWPYPTEADK+ALAE TGLD KQINNWFINQRKRH
Subjt:  NWGEREL--QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRH

Query:  WKPSESMQLATVDN
        WKPSE+MQ   +DN
Subjt:  WKPSESMQLATVDN

A0A6J1BPB0 homeobox protein knotted-1-like 67.5e-172100Show/hide
Query:  DMFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKV
        DMFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKV
Subjt:  DMFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKV

Query:  GAPPEIAGLLEEIRRENKQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQ
        GAPPEIAGLLEEIRRENKQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQ
Subjt:  GAPPEIAGLLEEIRRENKQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQ

Query:  GAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLA
        GAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLA
Subjt:  GAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLA

Query:  TVDN
        TVDN
Subjt:  TVDN

A0A6J1HD67 homeobox protein knotted-1-like 62.5e-12778.71Show/hide
Query:  FAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDC
        + +RST  +S  SFLSP      LDY +FL ST++  RDRIP FGS EL S A   +     SITP FPL  DV SVI  KAKI+SHPTYPRLLHAYIDC
Subjt:  FAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDC

Query:  QKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNW
         KVGAPPEIA LLEEIRREN   KQ+A+STCFG DPELDEFMETYC+MLVKYKSDLS PF EASSFL+NIELQLS+LCAGAS RS SNEDAMSSDDELNW
Subjt:  QKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNW

Query:  GERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPS
        GERE+Q AQM LEDK LKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EWWNVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWKPS
Subjt:  GERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPS

Query:  ESMQLATVDN
        ESMQ A++D+
Subjt:  ESMQLATVDN

A0A6J1K5E4 homeobox protein knotted-1-like 62.2e-13179.17Show/hide
Query:  DMFAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI
        +M+ +RST  +S KSFLSP      LDY +FL ST++  RDRIP+FGS EL      +SEAE PSITP FPL  DV ++I  KAKI+SHPTYPRLLHAYI
Subjt:  DMFAIRSTADYSAKSFLSPDN---LLDYHSFLSSTSF--RDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI

Query:  DCQKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDEL
        DC KVGAPPEIA LLEEIRREN   KQ+AISTCFG DPELDEFMETYC+MLVKYKSDLS PF+EASSFL++IELQLS+LCAGAS RS SNEDAMSSDDEL
Subjt:  DCQKVGAPPEIAGLLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDEL

Query:  NWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWK
        NWGERE+Q AQM LEDK LKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVL EWWNVHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKRHWK
Subjt:  NWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWK

Query:  PSESMQLATVDN
        PSESMQ A++D+
Subjt:  PSESMQLATVDN

SwissProt top hitse value%identityAlignment
A2Y007 Homeobox protein knotted-1-like 102.4e-6649.81Show/hide
Query:  AASAVSEAEAPSITPAFPLQPDVLSVIK-----AKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRRENKQHAISTC----FGADPELDEFMETY
        AAS  S       +P  P  P   +         KA+I  HP+YP LL AYI+C+KVGAPPE+  LLEEI RE +            G DPELDEFMETY
Subjt:  AASAVSEAEAPSITPAFPLQPDVLSVIK-----AKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRRENKQHAISTC----FGADPELDEFMETY

Query:  CEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAM-SSDDELNWGEREL----QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKK
        C +L +YK +L+ PF EA+SFL  I  QL+SLC GA   + ++++ + SS+DE   G+ +     Q     L D  LK+MLL ++   +  L+ EF KK+
Subjt:  CEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAM-SSDDELNWGEREL----QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKK

Query:  KKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD
        KKGKLPK+ R  L +WWN HY+WPYPTE DK+ LA  TGLDPKQINNWFINQRKRHWKPSE M+ A ++
Subjt:  KKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD

P46640 Homeobox protein knotted-1-like 24.2e-8756.96Show/hide
Query:  MFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVG
        M   RST DYS K+ L   +  DY S + ST+  D   +FGS EL +A S+        + P      D  S+   K+KI SHP YPRLL  YIDCQKVG
Subjt:  MFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVG

Query:  APPEIAGLLEEIRREN----KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAG-ASARSPSNEDAMSSDDELNWGE
        AP EIA +LEEI+REN    +  A  +CFGADPELDEFMETYC++LVKYK+DL+ PF EA++F+N IE+QL +LC G ASA + S++ A+SSD+EL   +
Subjt:  APPEIAGLLEEIRREN----KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAG-ASARSPSNEDAMSSDDELNWGE

Query:  R-ELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSE
              +Q    D+ LKD LL +FGSHI +LKLEFSKKKKKGKLP+E R+ L +WWNVH KWPYPTE DKI+LAE TGLD KQINNWFINQRKRHWKPSE
Subjt:  R-ELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSE

Query:  SMQLATVDN
        +M    +D+
Subjt:  SMQLATVDN

Q7GDL5 Homeobox protein knotted-1-like 102.4e-6649.81Show/hide
Query:  AASAVSEAEAPSITPAFPLQPDVLSVIK-----AKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRRENKQHAISTC----FGADPELDEFMETY
        AAS  S       +P  P  P   +         KA+I  HP+YP LL AYI+C+KVGAPPE+  LLEEI RE +            G DPELDEFMETY
Subjt:  AASAVSEAEAPSITPAFPLQPDVLSVIK-----AKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRRENKQHAISTC----FGADPELDEFMETY

Query:  CEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAM-SSDDELNWGEREL----QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKK
        C +L +YK +L+ PF EA+SFL  I  QL+SLC GA   + ++++ + SS+DE   G+ +     Q     L D  LK+MLL ++   +  L+ EF KK+
Subjt:  CEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAM-SSDDELNWGEREL----QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKK

Query:  KKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD
        KKGKLPK+ R  L +WWN HY+WPYPTE DK+ LA  TGLDPKQINNWFINQRKRHWKPSE M+ A ++
Subjt:  KKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD

Q84JS6 Homeobox protein knotted-1-like 67.7e-9760Show/hide
Query:  MFAIRSTADYSAKSFL--SPDNLL---DYHSFLSSTSFRDRI-PIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI
        M+   S  DYS KS L  SP++L+   DY + L S++  +R+  +FGS EL S A +   +EA SI P      D +S+   KAKI  HP+YPRLL AYI
Subjt:  MFAIRSTADYSAKSFL--SPDNLL---DYHSFLSSTSFRDRI-PIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI

Query:  DCQKVGAPPEIAGLLEEIRREN---KQHAI-STCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGA-SARSPSNEDAMSSDD
        DCQKVGAPPEIA LLEEI+RE+   KQ  + S+CFGADPELDEFMETYC++LVKYKSDL+ PF EA+ FLN IE+QL +LC G  SAR  S +  +SSD+
Subjt:  DCQKVGAPPEIAGLLEEIRREN---KQHAI-STCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGA-SARSPSNEDAMSSDD

Query:  ELNWGEREL-QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKR
        EL+ G+ E+ +  +   ED+ LKD LL +FGS I TLKLEFSKKKKKGKLP+E R+ L +WWN+HYKWPYPTE DKIALA+ TGLD KQINNWFINQRKR
Subjt:  ELNWGEREL-QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKR

Query:  HWKPSESMQLATVDN
        HWKPSE+M  A +D+
Subjt:  HWKPSESMQLATVDN

Q9FP29 Homeobox protein knotted-1-like 15.7e-6855.04Show/hide
Query:  KAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRRENKQ---HAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAG
        KA+I  HP YP LL AYI+C+KVGAPPE+A LL+EI RE +       +   G DPELDEFME YC +LV+YK +LS PF EA+SFL++I+ QLS+LC+G
Subjt:  KAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRRENKQ---HAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAG

Query:  AS---ARSPSNEDAM--SSDDELNWGEREL----QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADK
        A+   A + ++ D M  SSD++   GE ++    Q     L D  LK+MLL ++   +  L+ EF KK+KKGKLPK+ R  L EWWN HY+WPYPTE DK
Subjt:  AS---ARSPSNEDAM--SSDDELNWGEREL----QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADK

Query:  IALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD
        + LA  TGLDPKQINNWFINQRKRHWKPS+ M+ A ++
Subjt:  IALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 65.4e-9860Show/hide
Query:  MFAIRSTADYSAKSFL--SPDNLL---DYHSFLSSTSFRDRI-PIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI
        M+   S  DYS KS L  SP++L+   DY + L S++  +R+  +FGS EL S A +   +EA SI P      D +S+   KAKI  HP+YPRLL AYI
Subjt:  MFAIRSTADYSAKSFL--SPDNLL---DYHSFLSSTSFRDRI-PIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI

Query:  DCQKVGAPPEIAGLLEEIRREN---KQHAI-STCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGA-SARSPSNEDAMSSDD
        DCQKVGAPPEIA LLEEI+RE+   KQ  + S+CFGADPELDEFMETYC++LVKYKSDL+ PF EA+ FLN IE+QL +LC G  SAR  S +  +SSD+
Subjt:  DCQKVGAPPEIAGLLEEIRREN---KQHAI-STCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGA-SARSPSNEDAMSSDD

Query:  ELNWGEREL-QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKR
        EL+ G+ E+ +  +   ED+ LKD LL +FGS I TLKLEFSKKKKKGKLP+E R+ L +WWN+HYKWPYPTE DKIALA+ TGLD KQINNWFINQRKR
Subjt:  ELNWGEREL-QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKR

Query:  HWKPSESMQLATVDN
        HWKPSE+M  A +D+
Subjt:  HWKPSESMQLATVDN

AT1G23380.2 KNOTTED1-like homeobox gene 61.8e-9659.62Show/hide
Query:  MFAIRSTADYSAKSFL--SPDNLL---DYHSFLSSTSFRDRI-PIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI
        M+   S  DYS KS L  SP++L+   DY + L S++  +R+  +FGS EL S A +   +EA SI P      D +S+   KAKI  HP+YPRLL AYI
Subjt:  MFAIRSTADYSAKSFL--SPDNLL---DYHSFLSSTSFRDRI-PIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYI

Query:  DCQK--VGAPPEIAGLLEEIRREN---KQHAI-STCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGA-SARSPSNEDAMSS
        DCQK  VGAPPEIA LLEEI+RE+   KQ  + S+CFGADPELDEFMETYC++LVKYKSDL+ PF EA+ FLN IE+QL +LC G  SAR  S +  +SS
Subjt:  DCQK--VGAPPEIAGLLEEIRREN---KQHAI-STCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGA-SARSPSNEDAMSS

Query:  DDELNWGEREL-QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQR
        D+EL+ G+ E+ +  +   ED+ LKD LL +FGS I TLKLEFSKKKKKGKLP+E R+ L +WWN+HYKWPYPTE DKIALA+ TGLD KQINNWFINQR
Subjt:  DDELNWGEREL-QGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQR

Query:  KRHWKPSESMQLATVDN
        KRHWKPSE+M  A +D+
Subjt:  KRHWKPSESMQLATVDN

AT1G62360.1 KNOX/ELK homeobox transcription factor5.1e-6452.48Show/hide
Query:  SVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRRENKQHAIST----CFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQL
        S    KAKI++HP Y RLL AY++CQKVGAPPE+   LEE        A S     C G DP LD+FME YCEMLVKY+ +LS PF EA  FL  +E Q 
Subjt:  SVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIRRENKQHAIST----CFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQL

Query:  SSL-CAGASARSPSNEDAM------SSDDELNWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPT
         SL  +  S+ S   E A+      SS++E++      +      ED+ LK  LL ++  ++G+LK EF KK+KKGKLPKE R+ L +WW+ HYKWPYP+
Subjt:  SSL-CAGASARSPSNEDAM------SSDDELNWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPT

Query:  EADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD
        E  K+ALAE+TGLD KQINNWFINQRKRHWKPSE MQ   +D
Subjt:  EADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 23.0e-8856.96Show/hide
Query:  MFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVG
        M   RST DYS K+ L   +  DY S + ST+  D   +FGS EL +A S+        + P      D  S+   K+KI SHP YPRLL  YIDCQKVG
Subjt:  MFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVG

Query:  APPEIAGLLEEIRREN----KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAG-ASARSPSNEDAMSSDDELNWGE
        AP EIA +LEEI+REN    +  A  +CFGADPELDEFMETYC++LVKYK+DL+ PF EA++F+N IE+QL +LC G ASA + S++ A+SSD+EL   +
Subjt:  APPEIAGLLEEIRREN----KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAG-ASARSPSNEDAMSSDDELNWGE

Query:  R-ELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSE
              +Q    D+ LKD LL +FGSHI +LKLEFSKKKKKGKLP+E R+ L +WWNVH KWPYPTE DKI+LAE TGLD KQINNWFINQRKRHWKPSE
Subjt:  R-ELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSE

Query:  SMQLATVDN
        +M    +D+
Subjt:  SMQLATVDN

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana2.3e-6450.41Show/hide
Query:  DVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIR-----RENKQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNI
        +V  V   KAKI++HP Y  LL AY+DCQK+GAPP++   +   R     R+ +     +    DPELD+FME YC+MLVKY+ +L+ P  EA  F+  I
Subjt:  DVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLLEEIR-----RENKQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNI

Query:  ELQLSSLCAGA--SARSPSNE-DAMSSDDE----LNWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKW
        E QLS LC        +P  + D M S DE     + GE EL       ED+ LK+ LL ++  ++ +LK E SKKKKKGKLPKE R+ L  WW +HYKW
Subjt:  ELQLSSLCAGA--SARSPSNE-DAMSSDDE----LNWGERELQGAQMSLEDKSLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKW

Query:  PYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD
        PYP+E++K+ALAE+TGLD KQINNWFINQRKRHWKPSE MQ   +D
Subjt:  PYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACATGTTCGCCATCCGCTCCACTGCGGATTACTCGGCCAAGTCGTTCTTATCGCCGGACAATCTCCTCGACTATCACAGCTTCCTTTCATCCACAAGCTTCCGCGATCG
GATTCCCATCTTCGGATCCCATGAATTGCCGTCGGCTGCCTCCGCCGTATCCGAAGCTGAGGCACCTTCCATCACTCCAGCTTTTCCGCTCCAACCAGATGTTCTTAGCG
TCATCAAGGCCAAGGCCAAAATTGTCTCTCATCCTACCTATCCTCGTCTGCTTCACGCTTATATTGACTGCCAGAAGGTAGGAGCTCCTCCGGAGATAGCTGGCTTGTTG
GAGGAAATCCGGCGAGAAAACAAGCAACACGCTATTTCCACGTGCTTCGGAGCCGATCCCGAGCTCGACGAGTTCATGGAAACATACTGTGAGATGCTGGTAAAGTATAA
ATCAGATCTTTCAACGCCTTTTTATGAAGCGTCGTCCTTCTTGAACAACATCGAACTGCAACTTAGCAGCCTCTGTGCTGGTGCCTCCGCCAGAAGCCCTTCCAATGAGG
ATGCTATGTCATCGGATGATGAGCTTAATTGGGGAGAGAGGGAATTACAAGGTGCTCAAATGAGTTTAGAAGACAAAAGTCTTAAAGATATGCTCTTAAGTAGATTTGGC
AGCCACATTGGAACCTTGAAGTTGGAGTTTTCAAAGAAGAAGAAGAAAGGAAAACTACCTAAAGAAGGAAGGAAAGTACTGCACGAGTGGTGGAATGTTCACTATAAATG
GCCATATCCTACGGAAGCTGATAAAATTGCGCTGGCAGAGACAACGGGACTAGATCCCAAGCAAATTAACAATTGGTTTATTAACCAACGTAAGCGGCACTGGAAGCCTT
CTGAAAGCATGCAATTGGCAACTGTGGACAAT
mRNA sequenceShow/hide mRNA sequence
GACATGTTCGCCATCCGCTCCACTGCGGATTACTCGGCCAAGTCGTTCTTATCGCCGGACAATCTCCTCGACTATCACAGCTTCCTTTCATCCACAAGCTTCCGCGATCG
GATTCCCATCTTCGGATCCCATGAATTGCCGTCGGCTGCCTCCGCCGTATCCGAAGCTGAGGCACCTTCCATCACTCCAGCTTTTCCGCTCCAACCAGATGTTCTTAGCG
TCATCAAGGCCAAGGCCAAAATTGTCTCTCATCCTACCTATCCTCGTCTGCTTCACGCTTATATTGACTGCCAGAAGGTAGGAGCTCCTCCGGAGATAGCTGGCTTGTTG
GAGGAAATCCGGCGAGAAAACAAGCAACACGCTATTTCCACGTGCTTCGGAGCCGATCCCGAGCTCGACGAGTTCATGGAAACATACTGTGAGATGCTGGTAAAGTATAA
ATCAGATCTTTCAACGCCTTTTTATGAAGCGTCGTCCTTCTTGAACAACATCGAACTGCAACTTAGCAGCCTCTGTGCTGGTGCCTCCGCCAGAAGCCCTTCCAATGAGG
ATGCTATGTCATCGGATGATGAGCTTAATTGGGGAGAGAGGGAATTACAAGGTGCTCAAATGAGTTTAGAAGACAAAAGTCTTAAAGATATGCTCTTAAGTAGATTTGGC
AGCCACATTGGAACCTTGAAGTTGGAGTTTTCAAAGAAGAAGAAGAAAGGAAAACTACCTAAAGAAGGAAGGAAAGTACTGCACGAGTGGTGGAATGTTCACTATAAATG
GCCATATCCTACGGAAGCTGATAAAATTGCGCTGGCAGAGACAACGGGACTAGATCCCAAGCAAATTAACAATTGGTTTATTAACCAACGTAAGCGGCACTGGAAGCCTT
CTGAAAGCATGCAATTGGCAACTGTGGACAAT
Protein sequenceShow/hide protein sequence
DMFAIRSTADYSAKSFLSPDNLLDYHSFLSSTSFRDRIPIFGSHELPSAASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAGLL
EEIRRENKQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIELQLSSLCAGASARSPSNEDAMSSDDELNWGERELQGAQMSLEDKSLKDMLLSRFG
SHIGTLKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFINQRKRHWKPSESMQLATVDN