; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000913 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000913
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein POOR HOMOLOGOUS SYNAPSIS 1
Genome locationscaffold36:250469..252181
RNA-Seq ExpressionMS000913
SyntenyMS000913
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585176.1 Protein POOR-likeOUS SYNAPSIS 1, partial [Cucurbita argyrosperma subsp. sororia]1.7e-10672.46Show/hide
Query:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-------TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDK
        MAGF+G  +S+EE EMP AAIRDQWEVQFSRF+CYPS+ +T       T  N +L PL    RNRPPRGTWISSSSTA+LQLLH CS+ DLIL VRFRDK
Subjt:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-------TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDK

Query:  ILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQS
        ILEEHYLSKLHFSWPQ+ CISGFPARGTRTIFGSYRDSA+E SH +     +SVIQKFALRFST+ E DSFV+ILKEM++DARDIQPIS +FGSQI+++ 
Subjt:  ILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQS

Query:  ELLSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
           ++NRPSDSL EEL+NS ++QPYTPEMP SLKDT E Y  SQE  H+DHLES+FAALPPSFTSM+SNCSDVKQG
Subjt:  ELLSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG

KAG7020096.1 Protein POOR-likeOUS SYNAPSIS 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-10371.38Show/hide
Query:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-------TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDK
        MAGF+G  +S+EE EMP AAIRDQWEVQFSRF+CYPS+ +T       T  N +L PL    RNRPPRGTWISSSSTA+LQLLH CS+ DLIL VRFRDK
Subjt:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-------TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDK

Query:  ILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQS
        ILEEHYLSKLHFSWPQ+ CISGFPARGTRTIFGSYRDSA+E  H          IQKFALRFST+ E DSFV+ILKEM++DARDIQPIS +FGSQI+++ 
Subjt:  ILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQS

Query:  ELLSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
           ++NRPSDSL EEL+NS ++QPYTPEMP SLKDT E Y  SQE  H+DHLES+FAALPPSFTSM+SNCSDVKQG
Subjt:  ELLSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG

XP_022131407.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Momordica charantia]8.2e-13894.4Show/hide
Query:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYL
        MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYL
Subjt:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYL

Query:  SKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNR
        SKLHFSWPQVSCISGFPARGTRTIFGSYRDSANE             IQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGS+ITTQSELLSSNR
Subjt:  SKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNR

Query:  PSDSLCEELTNSIVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
        PSDSLCEEL+NSIVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
Subjt:  PSDSLCEELTNSIVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG

XP_022951934.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita moschata]1.6e-10169.64Show/hide
Query:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-----------TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVR
        MAGF+G  +S+EE EMP AAIRDQWEVQFSRF+CYPS+ +T           T  N +L PL    R+RPPRGTWISSSSTA+LQLLH CS+ DLIL VR
Subjt:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-----------TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVR

Query:  FRDKILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQI
        FRDKILEEHYLSKLHFSWPQ+ CISGFP RGTRTIFGSYRDSA+E             IQKFALRFST+ E DSFV+ILKEM++DARDIQPIS +FGSQI
Subjt:  FRDKILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQI

Query:  TTQSELLSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
        +++    ++NRPSDSL EEL+NS ++QPYTPEMPLSLKDT E Y  SQE  H+DHLES+FAALPPSFTSM+SNCSDVKQG
Subjt:  TTQSELLSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG

XP_023538055.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita pepo subsp. pepo]1.3e-10371.9Show/hide
Query:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-----TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKIL
        MAGF+G  +S+E+AEMP AAIRDQWEVQFSRF+CYPS+ +T     T  N +L PL    RNRPPRGTWISSSSTA+LQLLH CS+ DLIL VRFRDKIL
Subjt:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-----TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKIL

Query:  EEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSEL
        EEHYLSKLHFSWPQ+ CISGFPARGTRTIFGSYRDSA+E             IQKFALRFST+ E DSFV+ILKEM++DARDIQPIS +FGSQI+++   
Subjt:  EEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSEL

Query:  LSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
         ++NRPSDSL EEL+NS ++QPYTPEMPLSLKDT E Y  SQE  H+DHLES+FAALPPSFTSM+SNCSDVKQG
Subjt:  LSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG

TrEMBL top hitse value%identityAlignment
A0A2I4DDJ4 protein POOR HOMOLOGOUS SYNAPSIS 11.1e-5848.71Show/hide
Query:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYL
        MAG   +VR E+  ++  AA+ DQWE+QF+RF  YP  +++  + +   PL  ++R R P GTWISSSS+A L+L++  S+ D+ILTV  R KILE+HY+
Subjt:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYL

Query:  SKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNR
        SKLHFSWP VSC+SGFPARGTR++F SY D                 IQKFALRFST  ET+ F+N LKE+  D  DI P++++ GS+I +Q+EL+SSNR
Subjt:  SKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNR

Query:  PSDSLCEELT-NSIVQPYTPEMPLSLKDTVETYPCSQER--AHLDHLESVFAALPPSFTSMLSN-CSDVKQ
         S+  CEEL+     Q YTP+M  S  + +E +  + E+  A     E   AALPPSFTS+L+N CS+V Q
Subjt:  PSDSLCEELT-NSIVQPYTPEMPLSLKDTVETYPCSQER--AHLDHLESVFAALPPSFTSMLSN-CSDVKQ

A0A6J1BQX6 protein POOR HOMOLOGOUS SYNAPSIS 14.0e-13894.4Show/hide
Query:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYL
        MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYL
Subjt:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYL

Query:  SKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNR
        SKLHFSWPQVSCISGFPARGTRTIFGSYRDSANE             IQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGS+ITTQSELLSSNR
Subjt:  SKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNR

Query:  PSDSLCEELTNSIVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
        PSDSLCEEL+NSIVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
Subjt:  PSDSLCEELTNSIVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG

A0A6J1GK72 protein POOR HOMOLOGOUS SYNAPSIS 17.8e-10269.64Show/hide
Query:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-----------TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVR
        MAGF+G  +S+EE EMP AAIRDQWEVQFSRF+CYPS+ +T           T  N +L PL    R+RPPRGTWISSSSTA+LQLLH CS+ DLIL VR
Subjt:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT-----------TTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVR

Query:  FRDKILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQI
        FRDKILEEHYLSKLHFSWPQ+ CISGFP RGTRTIFGSYRDSA+E             IQKFALRFST+ E DSFV+ILKEM++DARDIQPIS +FGSQI
Subjt:  FRDKILEEHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQI

Query:  TTQSELLSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
        +++    ++NRPSDSL EEL+NS ++QPYTPEMPLSLKDT E Y  SQE  H+DHLES+FAALPPSFTSM+SNCSDVKQG
Subjt:  TTQSELLSSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG

A0A6J1KPK1 protein POOR HOMOLOGOUS SYNAPSIS 16.6e-10170.7Show/hide
Query:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT---TTNNASLHPLFPRLRN-RPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILE
        MAGF+G  +S+EEAEMP AAIRDQWEVQFSRF+CYP++ +T   T  + +L PL    R+ RPPRGTWISSSSTA+LQLLH CS+ D IL VRFRDKILE
Subjt:  MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAAT---TTNNASLHPLFPRLRN-RPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILE

Query:  EHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELL
        EHYLSKLHFSWPQ+ CISGFPARGTRT+FGSYRDSA+E             IQKFALRFST+ E DSFV+ILKEM++DARDIQPIS +FGSQI+++    
Subjt:  EHYLSKLHFSWPQVSCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELL

Query:  SSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG
        ++NRPSDSL EEL+NS ++QPYTPEMPLSLKDT E Y  SQE  H+DHLES+FAALPPSFTSM+SNCSDVKQG
Subjt:  SSNRPSDSLCEELTNS-IVQPYTPEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQG

A0A6P5U3P8 protein POOR HOMOLOGOUS SYNAPSIS 1-like1.1e-5851Show/hide
Query:  AAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPA
        +A+R+QWEV F+ F  YP    TT+    L PL P+ R R P   WISSSS A LQL+   S+ D++LTV F DKILEEHY+SKLHF WPQVSC+SGFPA
Subjt:  AAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPA

Query:  RGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNRPSDSLCEELTN-SIVQPY
        RGTR IF SYRD ++E             IQKF  RF + +E + F+N LK + ++  D +P++++ GS+I++QSEL SSNRP +  C++LT  + VQ Y
Subjt:  RGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNRPSDSLCEELTN-SIVQPY

Query:  TPEM-PLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDV
        TP++ P  L +  E Y C+QE   +D+ +S FAALPPSFTS LSNC  V
Subjt:  TPEM-PLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDV

SwissProt top hitse value%identityAlignment
Q45GQ7 Protein POOR HOMOLOGOUS SYNAPSIS 14.5e-3039.51Show/hide
Query:  QWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWIS-SSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPARGTR
        +W + F+RF+ YPSS +    +  L PL  R +   P GTW+S SSST  L ++   +  D+IL+V+   K+LEEHY+SKL+F+WPQ+SC+SGFP+RG+R
Subjt:  QWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWIS-SSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPARGTR

Query:  TIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNRPSDSLCEELTN---SIVQP---
         IF +Y DSAN+             IQKFALRFST      FV  LKE  +  ++    + +  ++        S   PSD++    T    ++V+P   
Subjt:  TIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNRPSDSLCEELTN---SIVQP---

Query:  YTPEM
        Y PEM
Subjt:  YTPEM

Q6W2J0 Protein POOR HOMOLOGOUS SYNAPSIS 14.7e-1928.57Show/hide
Query:  QWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLH-RCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPARGTR
        +WEV+++R+   P    T    + L  +   +     +GTWI +S  A L + H    S   +LT+   D + EEH++S L+FSWPQV+C++  P RG+R
Subjt:  QWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLH-RCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPARGTR

Query:  TIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEM--AEDARDIQPISSEFGSQITTQSELLSSNRPSDSL--CEELTNSIVQPYT
         +F S+ D   +             IQKFA+RF    + +SF++ ++    +    DI P  S++  + ++ SE + SN     L     L         
Subjt:  TIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEM--AEDARDIQPISSEFGSQITTQSELLSSNRPSDSL--CEELTNSIVQPYT

Query:  PEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCS
         E P++  +  + +      A      S F   PPSF  ML +CS
Subjt:  PEMPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCS

Arabidopsis top hitse value%identityAlignment
AT1G10710.1 poor homologous synapsis 13.2e-3139.51Show/hide
Query:  QWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWIS-SSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPARGTR
        +W + F+RF+ YPSS +    +  L PL  R +   P GTW+S SSST  L ++   +  D+IL+V+   K+LEEHY+SKL+F+WPQ+SC+SGFP+RG+R
Subjt:  QWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWIS-SSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPARGTR

Query:  TIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNRPSDSLCEELTN---SIVQP---
         IF +Y DSAN+             IQKFALRFST      FV  LKE  +  ++    + +  ++        S   PSD++    T    ++V+P   
Subjt:  TIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNRPSDSLCEELTN---SIVQP---

Query:  YTPEM
        Y PEM
Subjt:  YTPEM

AT1G10710.2 poor homologous synapsis 13.2e-3139.51Show/hide
Query:  QWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWIS-SSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPARGTR
        +W + F+RF+ YPSS +    +  L PL  R +   P GTW+S SSST  L ++   +  D+IL+V+   K+LEEHY+SKL+F+WPQ+SC+SGFP+RG+R
Subjt:  QWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWIS-SSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQVSCISGFPARGTR

Query:  TIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNRPSDSLCEELTN---SIVQP---
         IF +Y DSAN+             IQKFALRFST      FV  LKE  +  ++    + +  ++        S   PSD++    T    ++V+P   
Subjt:  TIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNRPSDSLCEELTN---SIVQP---

Query:  YTPEM
        Y PEM
Subjt:  YTPEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGATTCCAAGGTGTGGTGCGGAGCGAAGAGGAAGCGGAAATGCCCGCTGCTGCCATTAGAGACCAGTGGGAAGTTCAATTCTCTCGCTTCATTTGCTATCCAAG
TAGCGCCGCCACCACCACCAACAACGCCAGCCTCCATCCTCTCTTTCCCCGTCTCCGGAATCGCCCGCCTCGAGGCACATGGATCTCTTCGTCTTCCACTGCTATTCTGC
AACTCCTCCACCGTTGCTCCTCCCCTGATTTGATTCTCACCGTGCGTTTTCGAGATAAGATCCTTGAAGAGCACTACCTCTCCAAGCTTCATTTCTCATGGCCTCAGGTG
TCCTGTATCTCTGGTTTTCCTGCCAGAGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGCTAACGAGGTAAGTCATTATATAATGAAGATTTTGTCAATTTCTGT
GATCCAAAAGTTTGCCCTAAGATTTTCAACAGCTTACGAAACTGATTCATTTGTGAACATTCTCAAGGAAATGGCGGAGGATGCAAGAGATATTCAACCAATAAGCAGCG
AATTTGGGTCTCAGATTACAACACAATCCGAGTTATTATCTTCAAACAGACCGTCTGATAGCCTTTGTGAAGAATTGACCAATTCTATTGTCCAGCCTTACACTCCTGAA
ATGCCTTTGAGCTTAAAAGATACTGTAGAGACATACCCATGTTCTCAAGAAAGAGCACATCTTGACCACTTAGAAAGCGTCTTTGCAGCTTTGCCTCCCAGTTTCACGTC
TATGCTGTCAAACTGTTCAGATGTCAAACAAGGTCTGTATGACAAATTTAGAATGAAAATTCTTTCAAATTATCGTAGTGACAAATTTCCTTTCTTA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGATTCCAAGGTGTGGTGCGGAGCGAAGAGGAAGCGGAAATGCCCGCTGCTGCCATTAGAGACCAGTGGGAAGTTCAATTCTCTCGCTTCATTTGCTATCCAAG
TAGCGCCGCCACCACCACCAACAACGCCAGCCTCCATCCTCTCTTTCCCCGTCTCCGGAATCGCCCGCCTCGAGGCACATGGATCTCTTCGTCTTCCACTGCTATTCTGC
AACTCCTCCACCGTTGCTCCTCCCCTGATTTGATTCTCACCGTGCGTTTTCGAGATAAGATCCTTGAAGAGCACTACCTCTCCAAGCTTCATTTCTCATGGCCTCAGGTG
TCCTGTATCTCTGGTTTTCCTGCCAGAGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGCTAACGAGGTAAGTCATTATATAATGAAGATTTTGTCAATTTCTGT
GATCCAAAAGTTTGCCCTAAGATTTTCAACAGCTTACGAAACTGATTCATTTGTGAACATTCTCAAGGAAATGGCGGAGGATGCAAGAGATATTCAACCAATAAGCAGCG
AATTTGGGTCTCAGATTACAACACAATCCGAGTTATTATCTTCAAACAGACCGTCTGATAGCCTTTGTGAAGAATTGACCAATTCTATTGTCCAGCCTTACACTCCTGAA
ATGCCTTTGAGCTTAAAAGATACTGTAGAGACATACCCATGTTCTCAAGAAAGAGCACATCTTGACCACTTAGAAAGCGTCTTTGCAGCTTTGCCTCCCAGTTTCACGTC
TATGCTGTCAAACTGTTCAGATGTCAAACAAGGTCTGTATGACAAATTTAGAATGAAAATTCTTTCAAATTATCGTAGTGACAAATTTCCTTTCTTA
Protein sequenceShow/hide protein sequence
MAGFQGVVRSEEEAEMPAAAIRDQWEVQFSRFICYPSSAATTTNNASLHPLFPRLRNRPPRGTWISSSSTAILQLLHRCSSPDLILTVRFRDKILEEHYLSKLHFSWPQV
SCISGFPARGTRTIFGSYRDSANEVSHYIMKILSISVIQKFALRFSTAYETDSFVNILKEMAEDARDIQPISSEFGSQITTQSELLSSNRPSDSLCEELTNSIVQPYTPE
MPLSLKDTVETYPCSQERAHLDHLESVFAALPPSFTSMLSNCSDVKQGLYDKFRMKILSNYRSDKFPFL