; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000920 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000920
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionocticosapeptide/Phox/Bem1p (PB1) domain-containing protein
Genome locationscaffold36:272644..273265
RNA-Seq ExpressionMS000920
SyntenyMS000920
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142964.1 uncharacterized protein LOC101207008 [Cucumis sativus]1.5e-5772.47Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        T+KFLCSYGGKILPRYPDGKLRYHGGETRLL+V+RSISF+ELL KFG+LCGTS  VSFRCQLPREDLDALVS+TSDEDLANLIEEYDRAASP SS   KI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGN--SRRIFIHNANSW
        RAFLSPPK Y K IS PPSS++S SSS++  HRC R +S P+  SY ERS S VP  + N+ G+  S  +F+H+ NSW
Subjt:  RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGN--SRRIFIHNANSW

XP_022132205.1 uncharacterized protein LOC111005121 [Momordica charantia]1.8e-95100Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG
        RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG
Subjt:  RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG

XP_022961752.1 uncharacterized protein LOC111462427 [Cucurbita moschata]1.0e-5871.27Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        T+KFLCSYGGKILPRYPDG+LRYHGGETRLLA +RSISF++LL KFG+LCGTS+ VSFRCQLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPP-----SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW
        RAFL PPK Y K ISPP      SS SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN   W
Subjt:  RAFLSPPKLYTKNISPPP-----SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW

XP_022996772.1 uncharacterized protein LOC111491906 [Cucurbita maxima]8.7e-5871.11Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        T+KFLCSYGGKILPRYPDG+LRY GGETRLLA +RSISF++LL KFG+LCGTS+ VSFRCQLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPPSSL----SSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW
        RAFL PPK Y K ISPP S      SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN  SW
Subjt:  RAFLSPPKLYTKNISPPPSSL----SSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW

XP_023545452.1 uncharacterized protein LOC111804876 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-6072.22Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        T+KFLCSYGGKILPRYPDG+LRYHGGETRLLA +RSISF++LL KFG+LCGTS+ VSFRCQLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPPS----SLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW
        RAFL PPK Y K ISPP S    S SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN  SW
Subjt:  RAFLSPPKLYTKNISPPPS----SLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW

TrEMBL top hitse value%identityAlignment
A0A0A0LKJ2 PB1 domain-containing protein7.2e-5872.47Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        T+KFLCSYGGKILPRYPDGKLRYHGGETRLL+V+RSISF+ELL KFG+LCGTS  VSFRCQLPREDLDALVS+TSDEDLANLIEEYDRAASP SS   KI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGN--SRRIFIHNANSW
        RAFLSPPK Y K IS PPSS++S SSS++  HRC R +S P+  SY ERS S VP  + N+ G+  S  +F+H+ NSW
Subjt:  RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGN--SRRIFIHNANSW

A0A5B6ZZM6 Putative Octicosapeptide/Phox/Bem1p family protein isoform 17.2e-5061.31Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        T+KFLCSYGGKILPR+PDGKLRYHGGETR+LAV RSISF ELL K G+LCG S  VS RCQLP EDLDALVSITSDEDLANLIEEYDRAASPPSS   KI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPPSSLSSSS---------------------SSMSPPHRCSRHISLP--NHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW
        RAFLSPPK  +K ISPPPS+ +SSS                     SS  P +RC RHIS P      Y + +  +P    + HGN   I+ IHN + W
Subjt:  RAFLSPPKLYTKNISPPPSSLSSSS---------------------SSMSPPHRCSRHISLP--NHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW

A0A6J1BRT0 uncharacterized protein LOC1110051218.7e-96100Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG
        RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG
Subjt:  RAFLSPPKLYTKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG

A0A6J1HAZ2 uncharacterized protein LOC1114624275.0e-5971.27Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        T+KFLCSYGGKILPRYPDG+LRYHGGETRLLA +RSISF++LL KFG+LCGTS+ VSFRCQLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPP-----SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW
        RAFL PPK Y K ISPP      SS SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN   W
Subjt:  RAFLSPPKLYTKNISPPP-----SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW

A0A6J1K2Y4 uncharacterized protein LOC1114919064.2e-5871.11Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        T+KFLCSYGGKILPRYPDG+LRY GGETRLLA +RSISF++LL KFG+LCGTS+ VSFRCQLP+EDLDALVSITSDEDLANLIEEYDRAAS  SS + KI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPKLYTKNISPPPSSL----SSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW
        RAFL PPK Y K ISPP S      SSS SSMS  HRC R +S P H SY ERS S VP  + N+ G+S R+F+HN  SW
Subjt:  RAFLSPPKLYTKNISPPPSSL----SSSSSSMSPPHRCSRHISLPNHNSYFERSVS-VPLILCNLHGNSRRIFIHNANSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G70640.1 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein8.2e-3855.49Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI
        T+KFLCSYGG+I PRYPDGKLRY GG+TR+L+V+R+ISFTEL  K G++CG +V  S RCQLP +DLDALV++ SDEDL NL+EEYD A +       KI
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKI

Query:  RAFLSPPK--LYTKNISPPPSSLSSSSS--------SMSPPHRCSRHI--SLPNHNSYFERSVS
          FLSP K    T N SPPPS+ SSSSS        S S P  C   +  S+ N+  Y  RS S
Subjt:  RAFLSPPK--LYTKNISPPPSSLSSSSS--------SMSPPHRCSRHI--SLPNHNSYFERSVS

AT3G26510.1 Octicosapeptide/Phox/Bem1p family protein2.5e-4253.16Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFN
        T+KFLCSYGGKILPRYPDGKLRY+GG TR+LAV RS+SF+EL  K  ++C   G S+ V+ RCQLP EDLDALVSITSDEDL NLIEEYD  +   SS  
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFN

Query:  FKIRAFLSPPKLYT-KNISPPP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW
         KIR FL+PPK       SPPP          SS ++SS+S SP         LP            P   C +H NSR I+ +HN N W
Subjt:  FKIRAFLSPPKLYT-KNISPPP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW

AT3G26510.2 Octicosapeptide/Phox/Bem1p family protein2.5e-4253.16Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFN
        T+KFLCSYGGKILPRYPDGKLRY+GG TR+LAV RS+SF+EL  K  ++C   G S+ V+ RCQLP EDLDALVSITSDEDL NLIEEYD  +   SS  
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFN

Query:  FKIRAFLSPPKLYT-KNISPPP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW
         KIR FL+PPK       SPPP          SS ++SS+S SP         LP            P   C +H NSR I+ +HN N W
Subjt:  FKIRAFLSPPKLYT-KNISPPP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW

AT3G26510.3 Octicosapeptide/Phox/Bem1p family protein2.5e-4253.16Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFN
        T+KFLCSYGGKILPRYPDGKLRY+GG TR+LAV RS+SF+EL  K  ++C   G S+ V+ RCQLP EDLDALVSITSDEDL NLIEEYD  +   SS  
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFN

Query:  FKIRAFLSPPKLYT-KNISPPP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW
         KIR FL+PPK       SPPP          SS ++SS+S SP         LP            P   C +H NSR I+ +HN N W
Subjt:  FKIRAFLSPPKLYT-KNISPPP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW

AT3G26510.4 Octicosapeptide/Phox/Bem1p family protein2.5e-4253.16Show/hide
Query:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFN
        T+KFLCSYGGKILPRYPDGKLRY+GG TR+LAV RS+SF+EL  K  ++C   G S+ V+ RCQLP EDLDALVSITSDEDL NLIEEYD  +   SS  
Subjt:  TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLC---GTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFN

Query:  FKIRAFLSPPKLYT-KNISPPP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW
         KIR FL+PPK       SPPP          SS ++SS+S SP         LP            P   C +H NSR I+ +HN N W
Subjt:  FKIRAFLSPPKLYT-KNISPPP----------SSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIF-IHNANSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCCTCAAGTTCCTCTGCAGCTACGGCGGCAAGATCCTCCCTCGCTATCCCGACGGCAAACTCCGCTACCACGGTGGCGAAACCCGCCTTCTTGCCGTTAGCCGCTCCAT
TTCCTTTACTGAGCTGTTGTTCAAGTTCGGGCAGCTGTGCGGAACATCCGTTTGTGTGAGCTTCCGTTGCCAATTGCCAAGAGAAGACCTGGATGCCCTAGTTTCCATCA
CCTCCGACGAAGATCTCGCCAATCTCATCGAAGAGTACGATCGAGCCGCTTCTCCACCCTCGTCATTCAATTTCAAGATCAGAGCATTCCTTTCACCTCCAAAATTATAT
ACCAAAAACATCTCCCCTCCTCCTTCCTCCCTCTCCTCCTCCTCCTCCTCCATGTCGCCGCCTCACCGCTGCTCTCGTCACATCTCACTGCCCAATCATAATTCCTACTT
CGAAAGATCTGTGTCCGTCCCTCTCATTCTCTGTAACCTTCACGGAAACTCCAGGCGCATCTTCATCCACAACGCTAACAGCTGGGGA
mRNA sequenceShow/hide mRNA sequence
ACCCTCAAGTTCCTCTGCAGCTACGGCGGCAAGATCCTCCCTCGCTATCCCGACGGCAAACTCCGCTACCACGGTGGCGAAACCCGCCTTCTTGCCGTTAGCCGCTCCAT
TTCCTTTACTGAGCTGTTGTTCAAGTTCGGGCAGCTGTGCGGAACATCCGTTTGTGTGAGCTTCCGTTGCCAATTGCCAAGAGAAGACCTGGATGCCCTAGTTTCCATCA
CCTCCGACGAAGATCTCGCCAATCTCATCGAAGAGTACGATCGAGCCGCTTCTCCACCCTCGTCATTCAATTTCAAGATCAGAGCATTCCTTTCACCTCCAAAATTATAT
ACCAAAAACATCTCCCCTCCTCCTTCCTCCCTCTCCTCCTCCTCCTCCTCCATGTCGCCGCCTCACCGCTGCTCTCGTCACATCTCACTGCCCAATCATAATTCCTACTT
CGAAAGATCTGTGTCCGTCCCTCTCATTCTCTGTAACCTTCACGGAAACTCCAGGCGCATCTTCATCCACAACGCTAACAGCTGGGGA
Protein sequenceShow/hide protein sequence
TLKFLCSYGGKILPRYPDGKLRYHGGETRLLAVSRSISFTELLFKFGQLCGTSVCVSFRCQLPREDLDALVSITSDEDLANLIEEYDRAASPPSSFNFKIRAFLSPPKLY
TKNISPPPSSLSSSSSSMSPPHRCSRHISLPNHNSYFERSVSVPLILCNLHGNSRRIFIHNANSWG