CuGenDBv2

Gene ID	MS000930
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Coilin
Genome location	scaffold36:325559..330134
RNA-Seq Expression	MS000930
Synteny	MS000930
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR024822 - Coilin IPR031722 - Coilin, N-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022131892.1 coilin-like isoform X1 [Momordica charantia]

8.8e-310

96.88

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN
        VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTP SSKTKKNRYALTAKCLRAPSNLQQHIDLDHN
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN

Query:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV
        Q FQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKN   LKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV
Subjt:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV

Query:  RFLPSGQ-GLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
        RFLPSGQ   FV  A   +  +DTSSL+RITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
Subjt:  RFLPSGQ-GLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS

Query:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW
        SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW
Subjt:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW

Query:  ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS
        ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS
Subjt:  ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS

XP_022131894.1 coilin-like isoform X2 [Momordica charantia]

2.0e-297

93.93

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN
        VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTP SSK     Y      ++   N QQHIDLDHN
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN

Query:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV
        Q FQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKN   LKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV
Subjt:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV

Query:  RFLPSGQ-GLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
        RFLPSGQ   FV  A   +  +DTSSL+RITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
Subjt:  RFLPSGQ-GLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS

Query:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW
        SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW
Subjt:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW

Query:  ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS
        ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS
Subjt:  ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS

XP_023545487.1 coilin-like isoform X1 [Cucurbita pepo subsp. pepo]

2.4e-189

64.32

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        M+S TVR+RL+FEEG LLSK QR NGLKRSWILLKSHLHSISDFSSYLLD FLLR+ACP GL+LSMDGFVLPPFEPT++LKD DIVRVKK EDNV AV+ 
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVAD-EDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDH
        +ADM EGQ A +DVQL ANEELV + +DYKN A+ +DE YDL +QLEDT++ GS +KT CRKRKALKT  SSK KKNR+A T KCL +PSNLQQ    DH
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVAD-EDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDH

Query:  NQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGH
        N   QQ+V + +KS V+K KSSN +T               +KKQ +RKQ       VQQRIV  S  KLP ENYFE+SE+L  SS DE IVPV  RPGH
Subjt:  NQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGH

Query:  VRFLPSGQGLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
        VRFLP  QG         +  +DT+  N ITIK  +KWGKGKSS WRSNC NCEGQSS  Q KKD +T   PIDF++L+PC SLP+ GDIIAYRLI+LSS
Subjt:  VRFLPSGQGLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS

Query:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEA-ANKISEVSSTKQSWNK
        SWTPE SSFRVGKVSWC PEANKIMLIPVPEYPFVF KA+NE +       PYA+DGSLKADYSSLVDIRIV  ENS  FE A    ISE S++KQSW+K
Subjt:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEA-ANKISEVSSTKQSWNK

Query:  WENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQ----------------------ENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA
        WE HS APKQSWNKWEN+  APK+SWKKWEN T+ Q                      ENGKENAWD+I+QA SAKK N+SK+V W R EKK  +GA
Subjt:  WENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQ----------------------ENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA

XP_038886780.1 coilin-like isoform X1 [Benincasa hispida]

1.0e-192

65.92

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        M+S T+RIRL+FEEGHLLSKSQR NGLKRSWILLKSHL SISDFSSYLLDFFLLR ACPDGLILSMDGFVLPPFEPT++LKDKDIVRVKK EDNV+ VD+
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN
        +A M+EGQ AD+ VQL ANE+LV                               KKT CRKR+ALKT  SSK KKN+ A T+KCL+  +         HN
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN

Query:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLK------KDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVV
          FQQ+V L EKS VKK KSS  HTD  DSNK+  SKL+      KDK+Q+MRK  K QKEKVQQ+ VEK   KLPDENYFE+SE+LAGSSDDEEIVPVV
Subjt:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLK------KDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVV

Query:  VRPGHVRFLPSGQGLFVS--LAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAY
        +RPGHVRFLP GQ    +  +    +  +DT  LN ITIK  +K GK KSSS  S+CKN EGQSS LQ +K  AT N PIDF+KLKPCASLPK GDIIAY
Subjt:  VRPGHVRFLPSGQGLFVS--LAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAY

Query:  RLIDLSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSST
        RLI+LSSSWTPELSSFRVGKVSWCKPEANKIML+PVPEYPFV+KK ++E S       PYA+DGSLKADYSSLVDIRIV ++NS  FE A  +ISE S+T
Subjt:  RLIDLSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSST

Query:  KQSWNKWENHSSAPKQSWNKW---ENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA
        KQSWNKWEN+++APKQSWNKW    +   APK+SWKKWENH++ + NGKENAWDEILQA+SAKK N+S EV+W   EKK  EGA
Subjt:  KQSWNKWENHSSAPKQSWNKW---ENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA

XP_038886781.1 coilin-like isoform X2 [Benincasa hispida]

4.0e-192

65.92

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        M+S T+RIRL+FEEGHLLSKSQR NGLKRSWILLKSHL SISDFSSYLLDFFLLR ACPDGLILSMDGFVLPPFEPT++LKDKDIVRVKK EDNV+ VD+
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN
        +A M+EGQ AD+ VQL ANE+LV                               KKT CRKR+ALKT  SSK KKN+ A T+KCL+  +         HN
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN

Query:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLK---KDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRP
          FQQ+V L EKS VKK KSS  HTD  DSNK+ + K     KDK+Q+MRK  K QKEKVQQ+ VEK   KLPDENYFE+SE+LAGSSDDEEIVPVV+RP
Subjt:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLK---KDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRP

Query:  GHVRFLPSGQGLFVS--LAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLI
        GHVRFLP GQ    +  +    +  +DT  LN ITIK  +K GK KSSS  S+CKN EGQSS LQ +K  AT N PIDF+KLKPCASLPK GDIIAYRLI
Subjt:  GHVRFLPSGQGLFVS--LAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLI

Query:  DLSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQS
        +LSSSWTPELSSFRVGKVSWCKPEANKIML+PVPEYPFV+KK ++E S       PYA+DGSLKADYSSLVDIRIV ++NS  FE A  +ISE S+TKQS
Subjt:  DLSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQS

Query:  WNKWENHSSAPKQSWNKW---ENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA
        WNKWEN+++APKQSWNKW    +   APK+SWKKWENH++ + NGKENAWDEILQA+SAKK N+S EV+W   EKK  EGA
Subjt:  WNKWENHSSAPKQSWNKW---ENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BRI7 Coilin

9.9e-298

93.93

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN
        VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTP SSK     Y      ++   N QQHIDLDHN
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN

Query:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV
        Q FQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKN   LKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV
Subjt:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV

Query:  RFLPSGQ-GLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
        RFLPSGQ   FV  A   +  +DTSSL+RITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
Subjt:  RFLPSGQ-GLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS

Query:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW
        SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW
Subjt:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW

Query:  ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS
        ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS
Subjt:  ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS

A0A6J1BS99 Coilin

4.3e-310

96.88

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN
        VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTP SSKTKKNRYALTAKCLRAPSNLQQHIDLDHN
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHN

Query:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV
        Q FQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKN   LKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV
Subjt:  QSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHV

Query:  RFLPSGQ-GLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
        RFLPSGQ   FV  A   +  +DTSSL+RITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
Subjt:  RFLPSGQ-GLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS

Query:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW
        SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW
Subjt:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKW

Query:  ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS
        ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS
Subjt:  ENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGAHRS

A0A6J1K2W9 Coilin

5.8e-189

64.55

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        M+S TVR+RL+FEEGHLLSK  R NGLKRSW+LLK HLHSISDFSSYLLD FLLR+ACP GL+LSMDGFVLPPFEPT++LKD DIVRV K EDNV AV+ 
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVAD-EDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDH
        +ADM EGQ A +DVQL ANEELV D +DYKN AD +DE YDL +QLE TL+ GS +KT CRKRKALKT  SSK KKNR+A T KCL +PSNLQQ    DH
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVAD-EDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDH

Query:  NQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGH
        N   QQ+V L EKS V+K KSSN HTD  ++                        +KVQQRIV  S  KLP ENYFE+SE+L GSS DE I+PV  RPGH
Subjt:  NQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGH

Query:  VRFLPSGQGLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
        VRFLP  QG         +  +DT+  N ITIK  +KWGKGKSS W SNC NCEG+SS  Q KKD ++   PIDF++L+PC SLP+ GDIIAYRLI+LSS
Subjt:  VRFLPSGQGLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS

Query:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEE-AANKISEVSSTKQSWNK
        SWTP+LSSFRVGKVSWC PEANKIM+IPVPEYPFVF KA+NE +       PYA+DGSLKADYSSLVDIRIV  ENS  FE      ISE SS+KQSW+K
Subjt:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEE-AANKISEVSSTKQSWNK

Query:  WENHSSAPKQSWNKWENRTS--------APKRSW-KKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA
        WE HS APKQSW KWEN +S        A K+SW KKWEN T+ +ENGKENAWD+I+QA SAKK N+SKEV W R EKK  +GA
Subjt:  WENHSSAPKQSWNKWENRTS--------APKRSW-KKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA

A0A6J1K7N5 Coilin

5.8e-189

64.73

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        M+S TVR+RL+FEEGHLLSK  R NGLKRSW+LLK HLHSISDFSSYLLD FLLR+ACP GL+LSMDGFVLPPFEPT++LKD DIVRV K EDNV AV+ 
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVAD-EDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDH
        +ADM EGQ A +DVQL ANEELV D +DYKN AD +DE YDL +QLE TL+ GS +KT CRKRKALKT  SSK KKNR+A T KCL +PSNLQQ    DH
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVAD-EDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDH

Query:  NQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGH
        N   QQ+V L EKS V+K KSSN HTD  ++ K                       KVQQRIV  S  KLP ENYFE+SE+L GSS DE I+PV  RPGH
Subjt:  NQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGH

Query:  VRFLPSGQGLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
        VRFLP  QG         +  +DT+  N ITIK  +KWGKGKSS W SNC NCEG+SS  Q KKD ++   PIDF++L+PC SLP+ GDIIAYRLI+LSS
Subjt:  VRFLPSGQGLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS

Query:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEE-AANKISEVSSTKQSWNK
        SWTP+LSSFRVGKVSWC PEANKIM+IPVPEYPFVF KA+NE +       PYA+DGSLKADYSSLVDIRIV  ENS  FE      ISE SS+KQSW+K
Subjt:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEE-AANKISEVSSTKQSWNK

Query:  WENHSSAPKQSWNKWENRTS--------APKRSW-KKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA
        WE HS APKQSW KWEN +S        A K+SW KKWEN T+ +ENGKENAWD+I+QA SAKK N+SKEV W R EKK  +GA
Subjt:  WENHSSAPKQSWNKWENRTS--------APKRSW-KKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA

A0A6J1K9K7 Coilin

2.6e-189

65.07

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Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK
        M+S TVR+RL+FEEGHLLSK  R NGLKRSW+LLK HLHSISDFSSYLLD FLLR+ACP GL+LSMDGFVLPPFEPT++LKD DIVRV K EDNV AV+ 
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDK

Query:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVAD-EDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDH
        +ADM EGQ A +DVQL ANEELV D +DYKN AD +DE YDL +QLE TL+ GS +KT CRKRKALKT  SSK KKNR+A T KCL +PSNLQQ    DH
Subjt:  VADMVEGQSADIDVQLQANEELVMDGSDYKNVAD-EDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDH

Query:  NQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGH
        N   QQ+V L EKS V+K KSSN HTD  ++ K             +RKQ       VQQRIV  S  KLP ENYFE+SE+L GSS DE I+PV  RPGH
Subjt:  NQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGH

Query:  VRFLPSGQGLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS
        VRFLP  QG         +  +DT+  N ITIK  +KWGKGKSS W SNC NCEG+SS  Q KKD ++   PIDF++L+PC SLP+ GDIIAYRLI+LSS
Subjt:  VRFLPSGQGLFVSLAAWCKGVLDTSSLNRITIKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSS

Query:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEE-AANKISEVSSTKQSWNK
        SWTP+LSSFRVGKVSWC PEANKIM+IPVPEYPFVF KA+NE +       PYA+DGSLKADYSSLVDIRIV  ENS  FE      ISE SS+KQSW+K
Subjt:  SWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEE-AANKISEVSSTKQSWNK

Query:  WENHSSAPKQSWNKWENRTS--------APKRSW-KKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA
        WE HS APKQSW KWEN +S        A K+SW KKWEN T+ +ENGKENAWD+I+QA SAKK N+SKEV W R EKK  +GA
Subjt:  WENHSSAPKQSWNKWENRTS--------APKRSW-KKWENHTNAQENGKENAWDEILQAWSAKKTNVSKEVRWSRAEKKVQEGA

SwissProt top hits

e value

%identity

Alignment

P38432 Coilin

5.0e-04

23.93

Show/hide

Query:  DFDKLKPCASLPKGGDIIAYRLIDLSSSWTPELSSFRVGKVSWCKPEANKIML-----IPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVD
        D+  L   A+ P+ G+ IA++L++L+SS++P++S ++ G++    PE  ++ +     +P    P  F    +  +  +V      ++  +   +  L+D
Subjt:  DFDKLKPCASLPKGGDIIAYRLIDLSSSWTPELSSFRVGKVSWCKPEANKIML-----IPVPEYPFVFKKAVNEVSATQVDTSPYAKDGSLKADYSSLVD

Query:  IRIV--GRENSSSFEEA
         R++     N+SS E A
Subjt:  IRIV--GRENSSSFEEA

Q8RWK8 Coilin

7.3e-64

34.16

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLH-SISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKK--------
        M+ E VR+RL+FE+  +LSK Q+  GL RSW++L    H +IS+FS ++   F L  ACP GL LSM+GFVLPPFE + VLKDKDIV VKKK        
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLH-SISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKK--------

Query:  -EDNVTAVDKVADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFC------RKRKALKTPDSSKTKKNRYALTAKC
         ED+   V    ++ E         L ANEE   +   Y++ ++EDE  +   +     +A   +KT        RK+  L T + S  ++   A+ +  
Subjt:  -EDNVTAVDKVADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFC------RKRKALKTPDSSKTKKNRYALTAKC

Query:  LRAPSNLQQHIDLDHNQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSN---------KKNVS---KLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLP--
        ++     +    LD   +   +       P+ K K S+   ++ + N         KK  S   + KK K+Q +R++ K +KE++ Q  +  + S+ P  
Subjt:  LRAPSNLQQHIDLDHNQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSN---------KKNVS---KLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLP--

Query:  -------DENYFE--ESEKLAGSSD--DEEIVPVVVRPGHVRFLPSGQGLFVSLAAWCKGVLDTSSL-------NRITIKKGQKWGKGKSSSWRSNCKNC
                E + E  E+++    SD   +E+VPV VRPGH+RF P        LA   +  LD+  L         +T KKGQKWG  KS   +   ++ 
Subjt:  -------DENYFE--ESEKLAGSSD--DEEIVPVVVRPGHVRFLPSGQGLFVSLAAWCKGVLDTSSL-------NRITIKKGQKWGKGKSSSWRSNCKNC

Query:  EGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPY
          + +T Q  +     N PID+++L       K GD+IAYRLI+L+SSWTPE+SSFRVGK+S+  P++  + L+PV E+P   K   ++    Q DTS Y
Subjt:  EGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPY

Query:  AKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKWENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAK
         +DGSL+ ++S+L+D+R V   +S S E A + + E                 P QS  K       PK S  K E  T A+ENG+ + W+E+ +A SAK
Subjt:  AKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKWENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAK

Query:  KTNVSK
        K  +S+
Subjt:  KTNVSK

Arabidopsis top hits

e value

%identity

Alignment

AT1G13030.1 sphere organelles protein-related

5.2e-65

34.16

Show/hide

Query:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLH-SISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKK--------
        M+ E VR+RL+FE+  +LSK Q+  GL RSW++L    H +IS+FS ++   F L  ACP GL LSM+GFVLPPFE + VLKDKDIV VKKK        
Subjt:  MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLH-SISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKK--------

Query:  -EDNVTAVDKVADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFC------RKRKALKTPDSSKTKKNRYALTAKC
         ED+   V    ++ E         L ANEE   +   Y++ ++EDE  +   +     +A   +KT        RK+  L T + S  ++   A+ +  
Subjt:  -EDNVTAVDKVADMVEGQSADIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFC------RKRKALKTPDSSKTKKNRYALTAKC

Query:  LRAPSNLQQHIDLDHNQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSN---------KKNVS---KLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLP--
        ++     +    LD   +   +       P+ K K S+   ++ + N         KK  S   + KK K+Q +R++ K +KE++ Q  +  + S+ P  
Subjt:  LRAPSNLQQHIDLDHNQSFQQDVMLPEKSPVKKPKSSNVHTDAYDSN---------KKNVS---KLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLP--

Query:  -------DENYFE--ESEKLAGSSD--DEEIVPVVVRPGHVRFLPSGQGLFVSLAAWCKGVLDTSSL-------NRITIKKGQKWGKGKSSSWRSNCKNC
                E + E  E+++    SD   +E+VPV VRPGH+RF P        LA   +  LD+  L         +T KKGQKWG  KS   +   ++ 
Subjt:  -------DENYFE--ESEKLAGSSD--DEEIVPVVVRPGHVRFLPSGQGLFVSLAAWCKGVLDTSSL-------NRITIKKGQKWGKGKSSSWRSNCKNC

Query:  EGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPY
          + +T Q  +     N PID+++L       K GD+IAYRLI+L+SSWTPE+SSFRVGK+S+  P++  + L+PV E+P   K   ++    Q DTS Y
Subjt:  EGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVNEVSATQVDTSPY

Query:  AKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKWENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAK
         +DGSL+ ++S+L+D+R V   +S S E A + + E                 P QS  K       PK S  K E  T A+ENG+ + W+E+ +A SAK
Subjt:  AKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKWENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWSAK

Query:  KTNVSK
        K  +S+
Subjt:  KTNVSK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTCGGAGACGGTAAGGATACGTCTGATCTTCGAAGAGGGGCACCTGCTGAGCAAGTCGCAGAGGATAAATGGCCTCAAACGGAGCTGGATTCTTCTGAAATCCCA
CCTCCATTCCATTTCCGACTTCTCTTCCTATCTTCTTGACTTTTTCCTACTTCGTAATGCTTGTCCTGATGGTCTCATTCTTTCTATGGATGGTTTTGTTTTACCACCTT
TTGAGCCTACTGCTGTTTTGAAGGATAAAGATATTGTCAGGGTGAAGAAGAAGGAGGACAATGTAACTGCGGTTGATAAGGTCGCAGACATGGTGGAGGGGCAATCTGCT
GATATAGATGTTCAGCTTCAAGCCAACGAGGAGCTTGTGATGGATGGTAGTGACTACAAAAATGTAGCAGATGAAGATGAAACCTATGATCTTCCACATCAGTTGGAAGA
TACTTTGGAGGCGGGAAGCAATAAGAAAACCTTTTGTAGGAAGAGGAAGGCACTGAAAACACCTGACAGTTCAAAGACAAAGAAAAATAGATATGCTCTGACTGCAAAAT
GTCTGCGTGCTCCATCAAATCTTCAGCAGCATATTGATCTAGACCACAATCAAAGCTTCCAGCAGGATGTTATGCTTCCAGAAAAGAGTCCGGTCAAGAAGCCTAAATCA
TCCAATGTTCATACTGATGCATACGACTCCAACAAGAAAAATGTCAGTAAACTTAAAAAGGATAAAAAGCAATTGATGAGGAAACAAGACAAAGCCCAGAAGGAAAAGGT
ACAGCAAAGAATAGTTGAAAAGAGTAAGAGTAAGTTACCTGATGAAAATTACTTTGAGGAATCTGAAAAGCTAGCTGGCAGTAGTGATGATGAAGAAATTGTCCCCGTGG
TAGTCAGACCAGGACATGTTCGTTTTCTGCCTTCTGGACAAGGTCTGTTTGTCTCTCTTGCTGCATGGTGCAAAGGAGTACTTGACACCTCATCGTTGAATAGGATAACA
ATCAAAAAGGGACAAAAATGGGGTAAAGGGAAATCCTCGTCTTGGAGGAGTAACTGCAAGAATTGTGAGGGACAAAGTTCTACACTGCAAGTTAAAAAAGATTTTGCAAC
TTGGAACTACCCAATTGACTTCGATAAACTCAAACCTTGTGCTAGCTTGCCCAAGGGAGGTGACATAATTGCATATCGTTTAATTGACTTATCATCATCGTGGACTCCAG
AACTTTCCTCCTTCAGAGTTGGAAAGGTATCATGGTGTAAACCTGAAGCAAATAAGATTATGCTAATTCCTGTTCCAGAATATCCATTTGTTTTCAAAAAGGCAGTGAAT
GAGGTATCAGCTACACAAGTGGACACTTCTCCATATGCGAAAGATGGCTCTCTAAAGGCAGATTACTCCTCACTTGTAGACATCCGAATTGTTGGGCGTGAAAACTCAAG
TAGTTTTGAAGAAGCTGCTAATAAAATTAGTGAAGTATCTAGTACAAAACAAAGCTGGAACAAGTGGGAGAACCATTCCAGTGCACCAAAACAAAGCTGGAACAAGTGGG
AGAACCGCACCAGTGCACCTAAACGAAGCTGGAAAAAGTGGGAGAACCATACCAATGCACAGGAAAATGGGAAGGAAAATGCATGGGATGAAATTCTCCAGGCATGGAGC
GCAAAGAAAACTAATGTGTCCAAGGAAGTTCGATGGAGTAGAGCAGAAAAGAAAGTTCAGGAAGGAGCTCATCGTTCA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDSETVRIRLIFEEGHLLSKSQRINGLKRSWILLKSHLHSISDFSSYLLDFFLLRNACPDGLILSMDGFVLPPFEPTAVLKDKDIVRVKKKEDNVTAVDKVADMVEGQSA
DIDVQLQANEELVMDGSDYKNVADEDETYDLPHQLEDTLEAGSNKKTFCRKRKALKTPDSSKTKKNRYALTAKCLRAPSNLQQHIDLDHNQSFQQDVMLPEKSPVKKPKS
SNVHTDAYDSNKKNVSKLKKDKKQLMRKQDKAQKEKVQQRIVEKSKSKLPDENYFEESEKLAGSSDDEEIVPVVVRPGHVRFLPSGQGLFVSLAAWCKGVLDTSSLNRIT
IKKGQKWGKGKSSSWRSNCKNCEGQSSTLQVKKDFATWNYPIDFDKLKPCASLPKGGDIIAYRLIDLSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVFKKAVN
EVSATQVDTSPYAKDGSLKADYSSLVDIRIVGRENSSSFEEAANKISEVSSTKQSWNKWENHSSAPKQSWNKWENRTSAPKRSWKKWENHTNAQENGKENAWDEILQAWS
AKKTNVSKEVRWSRAEKKVQEGAHRS

MS000930 (gene) of Bitter gourd (TR) v1 genome