CuGenDBv2

Gene ID	MS000944
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Two-component response regulator
Genome location	scaffold36:401236..401343
RNA-Seq Expression	MS000944
Synteny	MS000944
Gene Ontology terms	GO:0000160 - phosphorelay signal transduction system (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009736 - cytokinin-activated signaling pathway (biological process) GO:0009787 - regulation of abscisic acid-activated signaling pathway (biological process) GO:0010082 - regulation of root meristem growth (biological process) GO:0016310 - phosphorylation (biological process) GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process) GO:2000031 - regulation of salicylic acid mediated signaling pathway (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0016301 - kinase activity (molecular function)
InterPro domains	IPR001789 - Signal transduction response regulator, receiver domain IPR011006 - CheY-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF8390576.1 hypothetical protein HHK36_025103 [Tetracentron sinense]

4.8e-11

94.44

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPR DAFP+GLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

XP_008444405.1 PREDICTED: two-component response regulator ARR11 [Cucumis melo]

4.8e-11

94.44

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPR DAFP+GLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

XP_022131414.1 two-component response regulator ARR11 isoform X1 [Momordica charantia]

2.5e-12

100

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

XP_022131415.1 two-component response regulator ARR11 isoform X2 [Momordica charantia]

2.5e-12

100

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

XP_023546496.1 two-component response regulator ARR11-like [Cucurbita pepo subsp. pepo]

8.1e-11

94.44

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPR DAFPVGLRVLVVDDDPTWL+ILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BB23 Two-component response regulator

2.3e-11

94.44

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPR DAFP+GLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

A0A5A7V2E4 Two-component response regulator

2.3e-11

94.44

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPR DAFP+GLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

A0A6J1BPN3 two-component response regulator ARR11 isoform X2

1.2e-12

100

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

A0A6J1BQ66 Two-component response regulator

1.2e-12

100

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

A0A6J1KC92 two-component response regulator ARR11-like

3.9e-11

94.44

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Query:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        SPR DAFPVGLRVLVVDDDPTWL+ILEKMLKKCSYE
Subjt:  SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

SwissProt top hits

e value

%identity

Alignment

A2X1N2 Two-component response regulator ORR24

2.8e-06

70.97

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Query:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSY
        D FPVG+RVL VDDDPT LKILE +L +C Y
Subjt:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSY

Q5N6V8 Two-component response regulator ORR26

1.4e-10

93.55

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Query:  AFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        AFP GLRVLVVDDDPTWLKILEKML+KCSYE
Subjt:  AFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

Q6H805 Two-component response regulator ORR24

2.8e-06

70.97

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Query:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSY
        D FPVG+RVL VDDDPT LKILE +L +C Y
Subjt:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSY

Q940D0 Two-component response regulator ARR1

3.7e-06

71.88

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Query:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        + FP GLRVLVVDDDPT L ILE+ML+ C YE
Subjt:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

Q9FXD6 Two-component response regulator ARR11

3.2e-10

100

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Query:  PVGLRVLVVDDDPTWLKILEKMLKKCSYE
        PVGLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  PVGLRVLVVDDDPTWLKILEKMLKKCSYE

Arabidopsis top hits

e value

%identity

Alignment

AT1G67710.1 response regulator 11

2.3e-11

100

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Query:  PVGLRVLVVDDDPTWLKILEKMLKKCSYE
        PVGLRVLVVDDDPTWLKILEKMLKKCSYE
Subjt:  PVGLRVLVVDDDPTWLKILEKMLKKCSYE

AT2G25180.1 response regulator 12

1.3e-06

67.74

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Query:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSY
        D FPVG+RVL VDDD T LKILE +L+ C Y
Subjt:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSY

AT3G16857.1 response regulator 1

2.6e-07

71.88

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Query:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        + FP GLRVLVVDDDPT L ILE+ML+ C YE
Subjt:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

AT3G16857.2 response regulator 1

2.6e-07

71.88

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Query:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE
        + FP GLRVLVVDDDPT L ILE+ML+ C YE
Subjt:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

AT4G16110.1 response regulator 2

2.2e-06

70.97

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Query:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSY
        D FP  LRVLVVDDDPT L ILE+ML  C Y
Subjt:  DAFPVGLRVLVVDDDPTWLKILEKMLKKCSY

Sequences

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CDS sequence

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TCTCCTAGATGCGATGCGTTTCCTGTTGGGCTTCGTGTTCTTGTCGTTGATGATGACCCAACGTGGCTGAAAATCCTGGAAAAGATGCTCAAGAAGTGCTCTTATGAA

mRNA sequence

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TCTCCTAGATGCGATGCGTTTCCTGTTGGGCTTCGTGTTCTTGTCGTTGATGATGACCCAACGTGGCTGAAAATCCTGGAAAAGATGCTCAAGAAGTGCTCTTATGAA

Protein sequence

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SPRCDAFPVGLRVLVVDDDPTWLKILEKMLKKCSYE

MS000944 (gene) of Bitter gourd (TR) v1 genome