; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000970 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000970
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWRKY domain-containing protein
Genome locationscaffold36:541169..541578
RNA-Seq ExpressionMS000970
SyntenyMS000970
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147294.1 probable WRKY transcription factor 46 isoform X1 [Momordica charantia]7.3e-2855.63Show/hide
Query:  SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEP-DLVCDGGCLWWLCRRRCRRLSIL----WLQ-RRNLWVQKS
        +NQNLP+PNS+ WFDFE  DLKVKS +L+TVFPPFCF SSSVGSE+ADE+VF DP+ +P  LV  GG               L    W      +  ++S
Subjt:  SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEP-DLVCDGGCLWWLCRRRCRRLSIL----WLQ-RRNLWVQKS

Query:  DLMEMISAATSVTNSRIWNGDWDIISVDFDQILPSASLDFLS
        DL E+ISA TSV NS IWNGDWD   V FDQ  P  SLDFLS
Subjt:  DLMEMISAATSVTNSRIWNGDWDIISVDFDQILPSASLDFLS

XP_022147296.1 probable WRKY transcription factor 46 isoform X2 [Momordica charantia]1.4e-2355.28Show/hide
Query:  SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEP-DLVCDGGCLWWLCRRRCRRLSIL----WLQ-RRNLWVQKS
        +NQNLP+PNS+ WFDFE  DLKVKS +L+TVFPPFCF SSSVGSE+ADE+VF DP+ +P  LV  GG               L    W      +  ++S
Subjt:  SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEP-DLVCDGGCLWWLCRRRCRRLSIL----WLQ-RRNLWVQKS

Query:  DLMEMISAATSVTNSRIWNGDWD
        DL E+ISA TSV NS IWNGDWD
Subjt:  DLMEMISAATSVTNSRIWNGDWD

XP_022974644.1 probable WRKY transcription factor 46 [Cucurbita maxima]1.1e-1541.22Show/hide
Query:  SNQNLPNPNSENWFDF---EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW-LQRRNLWVQ----
        ++QN  NPNSE  F+F   +   LK+K+ + + VFPPFCF     GSE  DE+VF + +MEP  V DG   W             W L      +Q    
Subjt:  SNQNLPNPNSENWFDF---EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW-LQRRNLWVQ----

Query:  --KSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS
          +S++ EM+SA TSVTNS I NGDWD+    +DFDQ      LDF+S
Subjt:  --KSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS

XP_022974955.1 probable WRKY transcription factor 46 isoform X1 [Cucurbita maxima]1.6e-1441.1Show/hide
Query:  SNQNLPNPNSENWFDF-EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW-LQRRNLWVQ------
        ++QN  NPNSE  F+F EQ    +K+ + + VFPPFCF     GSE  DE VF + +MEP  V DG   W             W L      +Q      
Subjt:  SNQNLPNPNSENWFDF-EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW-LQRRNLWVQ------

Query:  KSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS
        +S++ EM+SA TSVTNS I NGDW++    +DFDQ      LDF+S
Subjt:  KSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS

XP_023539564.1 probable WRKY transcription factor 46 [Cucurbita pepo subsp. pepo]2.3e-1340.14Show/hide
Query:  SNQNLPNPNSENWFDF-EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW--------LQRRNLWV
        ++QN  NPNSE  F+F +Q    +K+ + + VFPPF F     GSE  DE+VF + +MEP  V DG   W             W        +Q      
Subjt:  SNQNLPNPNSENWFDF-EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW--------LQRRNLWV

Query:  QKSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS
        ++S++ EM+SA TSVTNS I NGDWD+    VDFDQ      LDF+S
Subjt:  QKSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS

TrEMBL top hitse value%identityAlignment
A0A6J1D0K8 probable WRKY transcription factor 46 isoform X13.5e-2855.63Show/hide
Query:  SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEP-DLVCDGGCLWWLCRRRCRRLSIL----WLQ-RRNLWVQKS
        +NQNLP+PNS+ WFDFE  DLKVKS +L+TVFPPFCF SSSVGSE+ADE+VF DP+ +P  LV  GG               L    W      +  ++S
Subjt:  SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEP-DLVCDGGCLWWLCRRRCRRLSIL----WLQ-RRNLWVQKS

Query:  DLMEMISAATSVTNSRIWNGDWDIISVDFDQILPSASLDFLS
        DL E+ISA TSV NS IWNGDWD   V FDQ  P  SLDFLS
Subjt:  DLMEMISAATSVTNSRIWNGDWDIISVDFDQILPSASLDFLS

A0A6J1D1X8 probable WRKY transcription factor 46 isoform X26.9e-2455.28Show/hide
Query:  SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEP-DLVCDGGCLWWLCRRRCRRLSIL----WLQ-RRNLWVQKS
        +NQNLP+PNS+ WFDFE  DLKVKS +L+TVFPPFCF SSSVGSE+ADE+VF DP+ +P  LV  GG               L    W      +  ++S
Subjt:  SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEP-DLVCDGGCLWWLCRRRCRRLSIL----WLQ-RRNLWVQKS

Query:  DLMEMISAATSVTNSRIWNGDWD
        DL E+ISA TSV NS IWNGDWD
Subjt:  DLMEMISAATSVTNSRIWNGDWD

A0A6J1G5P2 probable WRKY transcription factor 463.5e-1239.46Show/hide
Query:  SNQNLPNPNSENWFDF-EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW--------LQRRNLWV
        ++QN  NPNSE  F+F EQ    +K+ + + VFPPF F     GSE   E+VF + +ME   V DG   W             W        +Q      
Subjt:  SNQNLPNPNSENWFDF-EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW--------LQRRNLWV

Query:  QKSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS
        ++S++ EM+SA TSVTNS I NGDWD+    VDFDQ      LDF+S
Subjt:  QKSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS

A0A6J1IFB8 probable WRKY transcription factor 46 isoform X17.6e-1541.1Show/hide
Query:  SNQNLPNPNSENWFDF-EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW-LQRRNLWVQ------
        ++QN  NPNSE  F+F EQ    +K+ + + VFPPFCF     GSE  DE VF + +MEP  V DG   W             W L      +Q      
Subjt:  SNQNLPNPNSENWFDF-EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW-LQRRNLWVQ------

Query:  KSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS
        +S++ EM+SA TSVTNS I NGDW++    +DFDQ      LDF+S
Subjt:  KSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS

A0A6J1II79 probable WRKY transcription factor 465.3e-1641.22Show/hide
Query:  SNQNLPNPNSENWFDF---EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW-LQRRNLWVQ----
        ++QN  NPNSE  F+F   +   LK+K+ + + VFPPFCF     GSE  DE+VF + +MEP  V DG   W             W L      +Q    
Subjt:  SNQNLPNPNSENWFDF---EQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILW-LQRRNLWVQ----

Query:  --KSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS
          +S++ EM+SA TSVTNS I NGDWD+    +DFDQ      LDF+S
Subjt:  --KSDLMEMISAATSVTNSRIWNGDWDII--SVDFDQILPSASLDFLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCAACCAAAATTTACCAAACCCTAATTCCGAAAACTGGTTCGATTTTGAACAACTTGATCTCAAGGTTAAATCTGTGGAATTGAACACCGTTTTTCCGCCGTTTTGCTT
CCAATCCTCGTCGGTCGGATCGGAAATTGCCGACGAAAGTGTGTTCTCGGATCCAGTGATGGAGCCCGATCTCGTGTGCGACGGTGGTTGTCTATGGTGGCTGTGTCGCC
GGCGGTGTCGAAGACTGAGCATTTTATGGCTGCAGCGAAGGAATCTTTGGGTTCAGAAATCGGATTTGATGGAGATGATTTCGGCCGCAACTTCAGTGACCAATTCGCGG
ATTTGGAACGGGGATTGGGATATCATATCAGTTGATTTTGACCAGATTCTCCCCTCTGCCAGTCTAGATTTCCTCTCG
mRNA sequenceShow/hide mRNA sequence
TCCAACCAAAATTTACCAAACCCTAATTCCGAAAACTGGTTCGATTTTGAACAACTTGATCTCAAGGTTAAATCTGTGGAATTGAACACCGTTTTTCCGCCGTTTTGCTT
CCAATCCTCGTCGGTCGGATCGGAAATTGCCGACGAAAGTGTGTTCTCGGATCCAGTGATGGAGCCCGATCTCGTGTGCGACGGTGGTTGTCTATGGTGGCTGTGTCGCC
GGCGGTGTCGAAGACTGAGCATTTTATGGCTGCAGCGAAGGAATCTTTGGGTTCAGAAATCGGATTTGATGGAGATGATTTCGGCCGCAACTTCAGTGACCAATTCGCGG
ATTTGGAACGGGGATTGGGATATCATATCAGTTGATTTTGACCAGATTCTCCCCTCTGCCAGTCTAGATTTCCTCTCG
Protein sequenceShow/hide protein sequence
SNQNLPNPNSENWFDFEQLDLKVKSVELNTVFPPFCFQSSSVGSEIADESVFSDPVMEPDLVCDGGCLWWLCRRRCRRLSILWLQRRNLWVQKSDLMEMISAATSVTNSR
IWNGDWDIISVDFDQILPSASLDFLS