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MS000976 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000976
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box/kelch-repeat protein
Genome locationscaffold36:586139..586518
RNA-Seq ExpressionMS000976
SyntenyMS000976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064737.1 F-box/kelch-repeat protein [Cucumis melo var. makuwa]3.3e-2481.82Show/hide
Query:  GILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL
        GIL MHRGR+N  KLQNITHT ISSK K EF GMDFESDWTRH KSSAFAA VIRSATSFM WSCRI ISE Y EFL
Subjt:  GILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL

KAE8647234.1 hypothetical protein Csa_019002, partial [Cucumis sativus]4.6e-3484.78Show/hide
Query:  WKLWGANLASSMALTGILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL
        WKLWGANLASSMALTGIL MHRGR++  KLQNITHT  SSKHK EF GMDFESDWTRH KSSAFAA VIRSATSFM WSCRI ISE YHEFL
Subjt:  WKLWGANLASSMALTGILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL

KAG2702702.1 hypothetical protein I3760_06G102300 [Carya illinoinensis]1.2e-1868.29Show/hide
Query:  MALTGILAMHRGRENSTKLQNITHTVISSKH-KCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL
        MAL+ I AM  GREN   L++I H V    H K + SGM+FESDWTRH KSSAF AQVIRSATSFMPWSCRI I E YHEFL
Subjt:  MALTGILAMHRGRENSTKLQNITHTVISSKH-KCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL

KAG6585216.1 hypothetical protein SDJN03_17949, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3686.96Show/hide
Query:  WKLWGANLASSMALTGILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL
        WK WGANLASSMALTGILAMHR R NS KLQ+ITHT ISSK+  EFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRI IS+ YHEFL
Subjt:  WKLWGANLASSMALTGILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL

KAG7020136.1 hypothetical protein SDJN02_16818 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3686.96Show/hide
Query:  WKLWGANLASSMALTGILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL
        WK WGANLASSMALTGILAMHR R NS KLQ+ITHT ISSK+  EFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRI IS+ YHEFL
Subjt:  WKLWGANLASSMALTGILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL

TrEMBL top hitse value%identityAlignment
A0A0A0KD56 Uncharacterized protein2.2e-3484.78Show/hide
Query:  WKLWGANLASSMALTGILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL
        WKLWGANLASSMALTGIL MHRGR++  KLQNITHT  SSKHK EF GMDFESDWTRH KSSAFAA VIRSATSFM WSCRI ISE YHEFL
Subjt:  WKLWGANLASSMALTGILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL

A0A5A7VCL2 F-box/kelch-repeat protein1.6e-2481.82Show/hide
Query:  GILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL
        GIL MHRGR+N  KLQNITHT ISSK K EF GMDFESDWTRH KSSAFAA VIRSATSFM WSCRI ISE Y EFL
Subjt:  GILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL

A0A5J5ASN4 Uncharacterized protein1.4e-1759.09Show/hide
Query:  LASSMALTGILAMHRGRENSTKLQ---NITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL
        ++S MAL    AM  GR NS KL+    +  T   +  +   +GMDFESDWT+HRKSSAF A+VIRSATSFMPWSC+I ISE YHEFL
Subjt:  LASSMALTGILAMHRGRENSTKLQ---NITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL

A0A5J5AWB6 Uncharacterized protein9.4e-1757.95Show/hide
Query:  LASSMALTGILAMHRGRENSTKLQ---NITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL
        ++SSMAL    AM  GR NS KL+    +  T   +  +   + MDFESDWT+HRKSSAF A+VIRSATSFMPWSC+I I E YHEFL
Subjt:  LASSMALTGILAMHRGRENSTKLQ---NITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL

F6HG90 Uncharacterized protein2.6e-1463.51Show/hide
Query:  MALTGILAMHRGRENSTKLQNITH-TVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQI
        MAL+ I AM   R+NS  L N  H T   +  KC+ SGM FESDWT HRKSSAF AQVIR ATSFMPWSC+I I
Subjt:  MALTGILAMHRGRENSTKLQNITH-TVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAAGTTATGGGGGGCTAACTTGGCAAGTTCTATGGCATTGACTGGTATTTTGGCAATGCATAGAGGAAGAGAGAACTCTACAAAGTTGCAGAACATCACTCATACTGT
CATATCTAGTAAACATAAGTGTGAATTTTCTGGTATGGACTTTGAATCAGACTGGACAAGACACAGAAAGTCCTCCGCATTTGCTGCCCAAGTGATCCGTTCTGCAACTT
CCTTTATGCCTTGGTCTTGTAGAATCCAAATTAGTGAAGTATATCATGAATTTCTT
mRNA sequenceShow/hide mRNA sequence
TGGAAGTTATGGGGGGCTAACTTGGCAAGTTCTATGGCATTGACTGGTATTTTGGCAATGCATAGAGGAAGAGAGAACTCTACAAAGTTGCAGAACATCACTCATACTGT
CATATCTAGTAAACATAAGTGTGAATTTTCTGGTATGGACTTTGAATCAGACTGGACAAGACACAGAAAGTCCTCCGCATTTGCTGCCCAAGTGATCCGTTCTGCAACTT
CCTTTATGCCTTGGTCTTGTAGAATCCAAATTAGTGAAGTATATCATGAATTTCTT
Protein sequenceShow/hide protein sequence
WKLWGANLASSMALTGILAMHRGRENSTKLQNITHTVISSKHKCEFSGMDFESDWTRHRKSSAFAAQVIRSATSFMPWSCRIQISEVYHEFL