; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS000989 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000989
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMYND-type domain-containing protein
Genome locationscaffold36:653857..655210
RNA-Seq ExpressionMS000989
SyntenyMS000989
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002893 - Zinc finger, MYND-type
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR036047 - F-box-like domain superfamily
IPR044508 - F-box protein At5g50450/At1g67340-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020146.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma]1.3e-17283.06Show/hide
Query:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF
        KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL +TASSPSDFI+ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRF
Subjt:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF

Query:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
        LK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
Subjt:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ

Query:  NVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG
        N++EGRRFLVQANARELAAVLSSTA+  TG AARSWVTC+P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Subjt:  NVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG

Query:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI
        CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   G G+GGV N+++ EDVI
Subjt:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI

XP_022951094.1 F-box protein At1g67340-like [Cucurbita moschata]1.3e-17283.06Show/hide
Query:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF
        KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL +TASSPSDFI+ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRF
Subjt:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF

Query:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
        LK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
Subjt:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ

Query:  NVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG
        N++EGRRFLVQANARELAAVLSSTA+  TG AARSWVTC+P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Subjt:  NVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG

Query:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI
        CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   G G+GGV N+++ EDVI
Subjt:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI

XP_023002802.1 F-box protein At1g67340-like [Cucurbita maxima]1.8e-17483.33Show/hide
Query:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF
        KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL + ASSPSDFI+ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRF
Subjt:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF

Query:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
        LK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
Subjt:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ

Query:  NVVEGRRFLVQANARELAAVLSSTA--STGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG
        N++EGRRFLVQANARELAAVLSSTA  +TG AARSWVTC+P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Subjt:  NVVEGRRFLVQANARELAAVLSSTA--STGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG

Query:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI
        CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   GDGDGGV N+++ EDVI
Subjt:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI

XP_023537715.1 F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]3.8e-17282.8Show/hide
Query:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF
        KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL +TASSPSDFI+ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRF
Subjt:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF

Query:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
        LK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
Subjt:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ

Query:  NVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG
        N++EGRRFLVQANARELAAVLSSTA+  TG AARSWVTC+P  HHR  A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Subjt:  NVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG

Query:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI
        CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   G G+GGV N+++ EDVI
Subjt:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI

XP_038885404.1 F-box protein At1g67340-like [Benincasa hispida]6.5e-17285.99Show/hide
Query:  SSPKRIR----KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILG
        SS KR R    KSDFFDSLPDDL++S+LSKL S+ASSPSDFI  LITCKR N+LGRHSLVLS ASQRTL I AKNWSESAHRFLKQCVDAGNVEACYILG
Subjt:  SSPKRIR----KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILG

Query:  MIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANAREL
        MIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQN++EGRRFLVQANAREL
Subjt:  MIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANAREL

Query:  AAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGI
        AAVLSS ++ GA +RSWVTCNP  HHR  A G S+ECPLLSDFGCNVPA EAHPASRFMAEWFA+RGGA GPGLRLCSHVGCGRPETRRHEFRRCSVCGI
Subjt:  AAVLSSTASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGI

Query:  VNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVIVGES
        VNYCSRACQALDWKLQHKAECAPLE+WPENDG+    +GDGG++N++D EDVI GES
Subjt:  VNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVIVGES

TrEMBL top hitse value%identityAlignment
A0A0A0LMZ9 MYND-type domain-containing protein1.7e-16584.09Show/hide
Query:  KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRG
        K DFFDSLPDDL++S+LSKL S+ASSPS FI ALITCKR N LGRHSLVLS ASQRTL I AKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRG
Subjt:  KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRG

Query:  SGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTASTG
        SGASLMAKAAI S+APALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGVCQN++EGRRFLVQANARELAAVLSS +S  
Subjt:  SGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTASTG

Query:  AAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL
        AA+RS VTCNP   HR  A G SS+CPLLSDFGCNVPA EAHPASRFMAEWFA+RGGA GPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL
Subjt:  AAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL

Query:  DWKLQHKAECAPLEMWPENDGEVANGDGDGGVVN------DSDGEDVIVGES
        DWKLQHKAECAPLE+WPENDG+    DGDGG++N      D D +D ++ ES
Subjt:  DWKLQHKAECAPLEMWPENDGEVANGDGDGGVVN------DSDGEDVIVGES

A0A1S3BB38 F-box protein At1g67340-like1.3e-17087.57Show/hide
Query:  KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRG
        KSDFFDSLPDDL++S+LSKL S+ASSPS FI ALITCKR N LGRHSLVLS ASQRTL I AKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRG
Subjt:  KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRG

Query:  SGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTASTG
        SGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQN++EGRRFLVQANARELAAVLSS +S  
Subjt:  SGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTASTG

Query:  AAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL
        AA+RSWVTCNPQ  HR  A G SSECPLLSDFGCNVPA EAHPASRFMAEWFA+RGGA GPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL
Subjt:  AAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQAL

Query:  DWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVIVGES
        DWKLQHKAECAPLE+WPENDG+    DG+GG++N+++ EDV VGES
Subjt:  DWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVIVGES

A0A6A1WKJ1 MYND-type domain-containing protein2.3e-15176.27Show/hide
Query:  SPKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFY
        SP+   KSD FD+LPDDLV+S+L KL + +  P+DFI  L+TCKRLN LG HSLVLS ASQ+T A+ AKNWSESAHRFLKQC DAGNVEACY LGMIRFY
Subjt:  SPKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFY

Query:  CLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLS
        CLQNRGSGASLMAKAAI SHA ALYSLAV+QFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGV QN+ EGRRFLVQANARELAAV+S
Subjt:  CLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLS

Query:  STASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCS
        S A +G   RSW T NP PH R +  GG   CPLLSDFGCNVPA EAHPASRFMAEWF+ R G+ GPGLRLCSHVGCGRPETRRHEFRRCSVCG VNYCS
Subjt:  STASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCS

Query:  RACQALDWKLQHKAECAPLEMWPENDGE------VANGDGDGGVVNDSDGEDVI
        RACQALDWK++HKA+C P E W + DG+      V  G+GDGGV  ++  EDVI
Subjt:  RACQALDWKLQHKAECAPLEMWPENDGE------VANGDGDGGVVNDSDGEDVI

A0A6J1GHQ9 F-box protein At1g67340-like6.3e-17383.06Show/hide
Query:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF
        KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL +TASSPSDFI+ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRF
Subjt:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF

Query:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
        LK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
Subjt:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ

Query:  NVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG
        N++EGRRFLVQANARELAAVLSSTA+  TG AARSWVTC+P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Subjt:  NVVEGRRFLVQANARELAAVLSSTAS--TGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG

Query:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI
        CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   G G+GGV N+++ EDVI
Subjt:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI

A0A6J1KKI0 F-box protein At1g67340-like8.8e-17583.33Show/hide
Query:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF
        KR + T+  ++  SPKR R          SDFF SLPDDL++S+LSKL + ASSPSDFI+ALITCKR N+LGRHSLVL+ ASQ+TLAIGAKNWSESAHRF
Subjt:  KRPAITHYHHYCSSPKRIR---------KSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRF

Query:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
        LK CVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ
Subjt:  LKQCVDAGNVEACYILGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQ

Query:  NVVEGRRFLVQANARELAAVLSSTA--STGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG
        N++EGRRFLVQANARELAAVLSSTA  +TG AARSWVTC+P  HHRA A G S+ECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG  GPGLRLCSHVG
Subjt:  NVVEGRRFLVQANARELAAVLSSTA--STGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVG

Query:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI
        CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC+PLE+WPEN+GE   GDGDGGV N+++ EDVI
Subjt:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVI

SwissProt top hitse value%identityAlignment
Q16342 Programmed cell death protein 25.4e-0432.95Show/hide
Query:  SECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECA
        ++ P  +DF    P +E  P     +    ++ GA      LC   GC  P+T       CS C    YCS+  Q LDW+L HK  CA
Subjt:  SECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECA

Q2YDC9 Programmed cell death protein 22.4e-0428.03Show/hide
Query:  SECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLE---------
        ++ P  +DF    P +E  P+    + +  ++ GA      LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  +         
Subjt:  SECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAECAPLE---------

Query:  --MWPENDGEVANGDGDGGVVNDSDGEDVIVG
          ++PE +  +   D     V + D E  I+G
Subjt:  --MWPENDGEVANGDGDGGVVNDSDGEDVIVG

Q9FK27 F-box protein At5g504501.2e-10759.29Show/hide
Query:  SDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGS
        ++ F+ L DDL++S+L KL ++ASSPSDF+  L TCKRLN LG H LVLS A  +TLA+ A+ WS+S+H+FLK CV+AGN++A Y LGMIRFYCLQN  S
Subjt:  SDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGS

Query:  GASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTASTGA
        GASLMAKAAI SHAPALYSL+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++V EGRR L+QANARELA  L S      
Subjt:  GASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTASTGA

Query:  AARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALD
                     + ++ +G  +E   L+D    VP  E HP +RF+ EWF+        GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALD
Subjt:  AARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALD

Query:  WKLQHKAECAPLEMWPENDGEVA-NGDGDGGVVNDSDGE
        W+ +HK EC PL++W     E+  +G+     ++D+ GE
Subjt:  WKLQHKAECAPLEMWPENDGEVA-NGDGDGGVVNDSDGE

Q9FPS9 Ubiquitin carboxyl-terminal hydrolase 159.2e-0453.12Show/hide
Query:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE
        RCS C  V YCS  CQ + W++ HK EC P+E
Subjt:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE

Q9FYF9 F-box protein At1g673405.6e-13468.57Show/hide
Query:  PKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYC
        P+    +D  DS+PDDLV+S+L KL ST+  P+DFI  L+TCKRL  L  + +VLS  S + +A+ A NWSE +HRFLK+CVDAG++EACY LGMIRFYC
Subjt:  PKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYC

Query:  LQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSS
        LQNRG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QNV EGRRFLVQANARELAAVLSS
Subjt:  LQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSS

Query:  TASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG-AQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCS
            G  ARS      QP    +   G   CPLLSDFGCNVPA E HPA+RF+A+WFA+RGG   G GLRLCSH GCGRPETR+HEFRRCSVCG+VNYCS
Subjt:  TASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG-AQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCS

Query:  RACQALDWKLQHKAECAPLEMW-PENDGEVANGDGDGGVVNDSDGEDVIV
        RACQALDWKL+HK +CAP++ W  E DG    G+G+  +  + +G++V++
Subjt:  RACQALDWKLQHKAECAPLEMW-PENDGEVANGDGDGGVVNDSDGEDVIV

Arabidopsis top hitse value%identityAlignment
AT1G17110.1 ubiquitin-specific protease 156.6e-0553.12Show/hide
Query:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE
        RCS C  V YCS  CQ + W++ HK EC P+E
Subjt:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE

AT1G17110.2 ubiquitin-specific protease 156.6e-0553.12Show/hide
Query:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE
        RCS C  V YCS  CQ + W++ HK EC P+E
Subjt:  RCSVCGIVNYCSRACQALDWKLQHKAECAPLE

AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger4.0e-13568.57Show/hide
Query:  PKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYC
        P+    +D  DS+PDDLV+S+L KL ST+  P+DFI  L+TCKRL  L  + +VLS  S + +A+ A NWSE +HRFLK+CVDAG++EACY LGMIRFYC
Subjt:  PKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYC

Query:  LQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSS
        LQNRG+GASLMAKAAI SHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGH+DALRELGHCLQDGYGV QNV EGRRFLVQANARELAAVLSS
Subjt:  LQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSS

Query:  TASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG-AQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCS
            G  ARS      QP    +   G   CPLLSDFGCNVPA E HPA+RF+A+WFA+RGG   G GLRLCSH GCGRPETR+HEFRRCSVCG+VNYCS
Subjt:  TASTGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGG-AQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCS

Query:  RACQALDWKLQHKAECAPLEMW-PENDGEVANGDGDGGVVNDSDGEDVIV
        RACQALDWKL+HK +CAP++ W  E DG    G+G+  +  + +G++V++
Subjt:  RACQALDWKLQHKAECAPLEMW-PENDGEVANGDGDGGVVNDSDGEDVIV

AT2G24640.1 ubiquitin-specific protease 192.5e-0447.5Show/hide
Query:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC
        CG+  T     ++CS C  V YCS ACQ  DWK  HK +C
Subjt:  CGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHKAEC

AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger8.3e-10959.29Show/hide
Query:  SDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGS
        ++ F+ L DDL++S+L KL ++ASSPSDF+  L TCKRLN LG H LVLS A  +TLA+ A+ WS+S+H+FLK CV+AGN++A Y LGMIRFYCLQN  S
Subjt:  SDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYILGMIRFYCLQNRGS

Query:  GASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTASTGA
        GASLMAKAAI SHAPALYSL+VIQFNGSGGSK DK+LRAGVALCAR+A+LGH+DALRELGHCLQDGYGV ++V EGRR L+QANARELA  L S      
Subjt:  GASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTASTGA

Query:  AARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALD
                     + ++ +G  +E   L+D    VP  E HP +RF+ EWF+        GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALD
Subjt:  AARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALD

Query:  WKLQHKAECAPLEMWPENDGEVA-NGDGDGGVVNDSDGE
        W+ +HK EC PL++W     E+  +G+     ++D+ GE
Subjt:  WKLQHKAECAPLEMWPENDGEVA-NGDGDGGVVNDSDGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACAACAAGAGGCCTGCAATTACCCACTATCACCATTATTGTTCTTCCCCCAAGAGAATCAGAAAATCTGATTTTTTTGACTCCTTGCCCGACGATCTTGTTCT
CTCTGTTCTCTCTAAACTTTGCTCCACTGCCTCTTCCCCTTCCGATTTCATCGCCGCTTTGATTACATGCAAGAGACTCAACGATTTGGGGCGTCATTCGCTTGTGTTAT
CCACAGCTTCTCAAAGAACTTTGGCAATTGGGGCTAAGAACTGGTCGGAATCTGCTCACCGGTTCCTCAAACAGTGTGTTGACGCCGGCAACGTCGAGGCTTGCTATATT
CTCGGCATGATTCGGTTTTACTGTCTGCAAAACCGAGGGAGCGGAGCTTCTCTCATGGCGAAGGCGGCGATTGGCTCCCACGCGCCGGCGCTTTACTCACTCGCCGTCAT
ACAGTTCAACGGCAGCGGGGGCTCTAAGAACGATAAGGATTTGAGAGCCGGCGTGGCTCTTTGTGCCAGAGCCGCCTTTCTCGGCCACATCGACGCCCTACGGGAGCTTG
GGCATTGCCTCCAAGATGGCTATGGAGTCTGCCAGAACGTCGTGGAGGGACGGCGATTTCTCGTCCAAGCCAACGCGCGGGAACTCGCCGCCGTGCTGTCATCGACGGCT
TCCACCGGCGCCGCGGCGCGTTCTTGGGTCACGTGCAACCCGCAACCGCACCACCGGGCGATCGCGGCGGGGGGGTCTTCCGAGTGCCCGTTGCTGAGCGATTTCGGGTG
CAACGTGCCGGCGGCGGAGGCGCACCCGGCGAGTCGATTTATGGCGGAGTGGTTCGCCATTCGGGGCGGCGCGCAGGGGCCAGGGCTGAGGCTTTGTTCGCACGTGGGGT
GTGGGCGGCCGGAGACGAGGAGGCACGAGTTTCGTCGATGTTCTGTTTGTGGGATCGTCAACTACTGCTCACGCGCTTGCCAGGCACTTGATTGGAAGCTGCAGCATAAA
GCAGAATGCGCGCCGCTGGAGATGTGGCCGGAAAACGACGGGGAAGTGGCCAACGGCGACGGCGACGGAGGAGTTGTAAATGACAGCGACGGTGAGGACGTAATCGTCGG
GGAGAGT
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACAACAAGAGGCCTGCAATTACCCACTATCACCATTATTGTTCTTCCCCCAAGAGAATCAGAAAATCTGATTTTTTTGACTCCTTGCCCGACGATCTTGTTCT
CTCTGTTCTCTCTAAACTTTGCTCCACTGCCTCTTCCCCTTCCGATTTCATCGCCGCTTTGATTACATGCAAGAGACTCAACGATTTGGGGCGTCATTCGCTTGTGTTAT
CCACAGCTTCTCAAAGAACTTTGGCAATTGGGGCTAAGAACTGGTCGGAATCTGCTCACCGGTTCCTCAAACAGTGTGTTGACGCCGGCAACGTCGAGGCTTGCTATATT
CTCGGCATGATTCGGTTTTACTGTCTGCAAAACCGAGGGAGCGGAGCTTCTCTCATGGCGAAGGCGGCGATTGGCTCCCACGCGCCGGCGCTTTACTCACTCGCCGTCAT
ACAGTTCAACGGCAGCGGGGGCTCTAAGAACGATAAGGATTTGAGAGCCGGCGTGGCTCTTTGTGCCAGAGCCGCCTTTCTCGGCCACATCGACGCCCTACGGGAGCTTG
GGCATTGCCTCCAAGATGGCTATGGAGTCTGCCAGAACGTCGTGGAGGGACGGCGATTTCTCGTCCAAGCCAACGCGCGGGAACTCGCCGCCGTGCTGTCATCGACGGCT
TCCACCGGCGCCGCGGCGCGTTCTTGGGTCACGTGCAACCCGCAACCGCACCACCGGGCGATCGCGGCGGGGGGGTCTTCCGAGTGCCCGTTGCTGAGCGATTTCGGGTG
CAACGTGCCGGCGGCGGAGGCGCACCCGGCGAGTCGATTTATGGCGGAGTGGTTCGCCATTCGGGGCGGCGCGCAGGGGCCAGGGCTGAGGCTTTGTTCGCACGTGGGGT
GTGGGCGGCCGGAGACGAGGAGGCACGAGTTTCGTCGATGTTCTGTTTGTGGGATCGTCAACTACTGCTCACGCGCTTGCCAGGCACTTGATTGGAAGCTGCAGCATAAA
GCAGAATGCGCGCCGCTGGAGATGTGGCCGGAAAACGACGGGGAAGTGGCCAACGGCGACGGCGACGGAGGAGTTGTAAATGACAGCGACGGTGAGGACGTAATCGTCGG
GGAGAGT
Protein sequenceShow/hide protein sequence
MKNNKRPAITHYHHYCSSPKRIRKSDFFDSLPDDLVLSVLSKLCSTASSPSDFIAALITCKRLNDLGRHSLVLSTASQRTLAIGAKNWSESAHRFLKQCVDAGNVEACYI
LGMIRFYCLQNRGSGASLMAKAAIGSHAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVCQNVVEGRRFLVQANARELAAVLSSTA
STGAAARSWVTCNPQPHHRAIAAGGSSECPLLSDFGCNVPAAEAHPASRFMAEWFAIRGGAQGPGLRLCSHVGCGRPETRRHEFRRCSVCGIVNYCSRACQALDWKLQHK
AECAPLEMWPENDGEVANGDGDGGVVNDSDGEDVIVGES