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MS000990 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS000990
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchaperone protein dnaJ-related
Genome locationscaffold36:667219..667503
RNA-Seq ExpressionMS000990
SyntenyMS000990
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061011.1 uncharacterized protein E6C27_scaffold501G001460 [Cucumis melo var. makuwa]1.1e-3580.21Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
        MD + L QLATGLSV+AGAVVVKSV++QK PMAG +PRCPTC GSGRVTC+CVRWSDGD GCRSC+GSGRMSCRSCGGGGRGRPI+VQLS  Q +R
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR

KAG6585227.1 hypothetical protein SDJN03_17960, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3985.11Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPN
        MDP+ L+Q+ATGLSV+AGAVVVKSV++QKPMA P+PRC TCNGSGRVTC+CVRWSDGD GCRSC+GSGRMSCRSCGGGGRGRPITVQLSA QPN
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPN

XP_004142934.1 uncharacterized protein LOC101220122 [Cucumis sativus]6.0e-3783.33Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
        MD + L+QLATGLSV+AGAVVVKSV++QK PMAG +PRCPTC GSGRVTCICVRWSDGD GCRSC+GSGRMSCRSCGGGGRGRPITVQLS  Q NR
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR

XP_010100228.1 uncharacterized protein LOC21384964 [Morus notabilis]2.1e-3474.47Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPN
        M+P+ L Q+ATGLSV+ GAV+VKSVMDQKPMAGP PRCP+CNG+GRVTC+C RWSDGD GCR+CAGSGRM C SCGG G GRPIT Q+S  +PN
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPN

XP_022132135.1 uncharacterized protein LOC111005075 [Momordica charantia]1.4e-4698.95Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
        MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLP CPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR

TrEMBL top hitse value%identityAlignment
A0A0A0LKQ8 Uncharacterized protein2.9e-3783.33Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
        MD + L+QLATGLSV+AGAVVVKSV++QK PMAG +PRCPTC GSGRVTCICVRWSDGD GCRSC+GSGRMSCRSCGGGGRGRPITVQLS  Q NR
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR

A0A5A7V5E2 Uncharacterized protein5.5e-3680.21Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
        MD + L QLATGLSV+AGAVVVKSV++QK PMAG +PRCPTC GSGRVTC+CVRWSDGD GCRSC+GSGRMSCRSCGGGGRGRPI+VQLS  Q +R
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQK-PMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR

A0A5N6R398 Uncharacterized protein1.8e-3475.79Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
        M P+ L QLATGLSV+AGAV+VKSVMDQKPMAGP PRCP+CNG+GRVTC+C RWSDGD GCR+CAGSGRM CRSCGG G GRP+  QL    PNR
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR

A0A6J1BRL0 uncharacterized protein LOC1110050756.9e-4798.95Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
        MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLP CPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR

W9RCB8 Uncharacterized protein1.0e-3474.47Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPN
        M+P+ L Q+ATGLSV+ GAV+VKSVMDQKPMAGP PRCP+CNG+GRVTC+C RWSDGD GCR+CAGSGRM C SCGG G GRPIT Q+S  +PN
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43260.1 chaperone protein dnaJ-related6.0e-3567.37Show/hide
Query:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR
        M P+ + QLATG+SV+AGAV +KSVMDQKPMAG  PRCPTCNG+GRVTC C RWSDGD GCR C+GSGR +C +CGG G GRP+  Q++   PNR
Subjt:  MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGATGGGGTTGGCTCAGCTGGCGACGGGGCTGAGCGTGGTGGCCGGCGCGGTGGTGGTGAAGTCCGTGATGGACCAGAAGCCGATGGCCGGGCCGTTGCCCAG
GTGCCCGACTTGCAACGGATCGGGTCGGGTCACGTGCATATGTGTTCGGTGGTCAGATGGAGATTTCGGGTGCCGTTCATGTGCCGGGTCGGGTCGGATGTCGTGCAGAA
GCTGCGGCGGCGGTGGAAGAGGGCGGCCGATTACAGTGCAGTTATCAGCCGGTCAACCCAACCGC
mRNA sequenceShow/hide mRNA sequence
ATGGATCCGATGGGGTTGGCTCAGCTGGCGACGGGGCTGAGCGTGGTGGCCGGCGCGGTGGTGGTGAAGTCCGTGATGGACCAGAAGCCGATGGCCGGGCCGTTGCCCAG
GTGCCCGACTTGCAACGGATCGGGTCGGGTCACGTGCATATGTGTTCGGTGGTCAGATGGAGATTTCGGGTGCCGTTCATGTGCCGGGTCGGGTCGGATGTCGTGCAGAA
GCTGCGGCGGCGGTGGAAGAGGGCGGCCGATTACAGTGCAGTTATCAGCCGGTCAACCCAACCGC
Protein sequenceShow/hide protein sequence
MDPMGLAQLATGLSVVAGAVVVKSVMDQKPMAGPLPRCPTCNGSGRVTCICVRWSDGDFGCRSCAGSGRMSCRSCGGGGRGRPITVQLSAGQPNR