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MS001018 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001018
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncytochrome b5
Genome locationscaffold36:875396..877140
RNA-Seq ExpressionMS001018
SyntenyMS001018
Gene Ontology termsGO:0009707 - chloroplast outer membrane (cellular component)
GO:0010319 - stromule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598642.1 Cytochrome b5 isoform A, partial [Cucurbita argyrosperma subsp. sororia]5.5e-5783.21Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSIS LYSI+E+S HSSNDDCWI+IDGKVYDLTSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKDARELM+KFYIGELD SSSAIPEL+T++ D YAA
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        RVQ L KQYW  P+A+LGISVV+GWL+L KK
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

XP_022131367.1 cytochrome b5 [Momordica charantia]2.6e-6799.24Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        RVQGLAKQYWAAPVAMLGISVVIGWLFLR K
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

XP_022961879.1 cytochrome b5 [Cucurbita moschata]2.7e-5682.44Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSIS LYSI+E+S HSSNDDCWI+IDGKVYDLTSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKDARELM+KFYIGELD SSSAIPEL+ ++ D YAA
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        RVQ L KQYW  P+A+LGISVV+GWL+L KK
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

XP_022997294.1 cytochrome b5 [Cucurbita maxima]2.3e-5581.68Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSIS LYSI+EIS HSSNDDCWI+IDGKVYDLTSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKD RELM+KFYIGELD SSSAIP L+T++ D YAA
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        +VQ L KQYW  P+A+LGISVV+GWL+L KK
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

XP_023545611.1 cytochrome b5 [Cucurbita pepo subsp. pepo]3.6e-5681.68Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSIS LYSI+E+S HSSNDDCWI+IDGKVYDLTSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKDARELM+KFYIGELD SSSAIPEL+T++ D YAA
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        RVQ L KQYW  P+A+LG+SV +GWL+L KK
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

TrEMBL top hitse value%identityAlignment
A0A0A0KIR1 Cytochrome b5 heme-binding domain-containing protein8.0e-5480.15Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSIS LYSIQE+S HSSNDDCWI+IDGKVYDLTSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKDARELM+KFYIG LD SS    +L+T Q+D YA 
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        RVQ L KQYW APVA++GISVV+GW +LRKK
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

A0A1S3BCR4 cytochrome b52.3e-5377.86Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSIS LYSIQE+S HSS+DDCWI+IDGKVYDLTSYLDEHPGGDD+I+ ATGRDATDDFEDAGHSKDARELM+KFYIG LD SSS   +L+T Q+D YA 
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        RVQ L KQYW APVA++GIS+V+GW++LRKK
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

A0A6J1BQT8 cytochrome b51.3e-6799.24Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        RVQGLAKQYWAAPVAMLGISVVIGWLFLR K
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

A0A6J1HFA7 cytochrome b51.3e-5682.44Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSIS LYSI+E+S HSSNDDCWI+IDGKVYDLTSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKDARELM+KFYIGELD SSSAIPEL+ ++ D YAA
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        RVQ L KQYW  P+A+LGISVV+GWL+L KK
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

A0A6J1KB15 cytochrome b51.1e-5581.68Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        MPSIS LYSI+EIS HSSNDDCWI+IDGKVYDLTSYLDEHPGGDDVI+AATGRDATDDFEDAGHSKD RELM+KFYIGELD SSSAIP L+T++ D YAA
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK
        +VQ L KQYW  P+A+LGISVV+GWL+L KK
Subjt:  RVQGLAKQYWAAPVAMLGISVVIGWLFLRKK

SwissProt top hitse value%identityAlignment
O48845 Cytochrome b5 isoform B4.4e-2555Show/hide
Query:  SNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS
        + ++++ E+S H+   DCWIVI+GKVY++T +L++HPGGDDV+L++TG+DATDDFED GHS+ ARE+M+++Y+GE+D ++
Subjt:  SNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS

P40934 Cytochrome b52.3e-2642.54Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        M S   +   +E+S H+   DCW++I GKVYD+T ++D+HPGGD+V+L++TG+DAT+DFED GHS  AR++M+K+YIGE+D  SS +P  +T     Y A
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQ-----------YWAAPVAMLGISVVI
         VQ    Q            +  P+ +LG+++V+
Subjt:  RVQGLAKQ-----------YWAAPVAMLGISVVI

Q42342 Cytochrome b5 isoform E4.0e-2641.86Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        M S   + S +E+S H+   DCW++I GKVYD+T ++D+HPGGD+V+L++TG+DAT+DFED GHS  AR++M K++IGE+D  SS++P  +T       A
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQY------WAAPVAMLGISVVI
          Q    ++      +  P+ +LG+++V+
Subjt:  RVQGLAKQY------WAAPVAMLGISVVI

Q9FDW8 Cytochrome b5 isoform A2.0e-4160.45Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS-SAIPEL---KTEQLD
        MP+++ LYS++E + H+  DDCW+VIDGKVYD++SY+DEHPGGDDV+LA  G+DATDDFEDAGHSKDARELM+K++IGELD SS   IPEL   K +Q  
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS-SAIPEL---KTEQLD

Query:  DYAARVQGLAKQYWAAPVAMLGISVVIGWLFLRK
        D   ++  L KQYW  PV+++ ISV +  LF RK
Subjt:  DYAARVQGLAKQYWAAPVAMLGISVVIGWLFLRK

Q9ZWT2 Cytochrome B5 isoform D5.8e-2557.69Show/hide
Query:  LYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS
        ++++ E+S HSS  DCWIVIDGKVYD+T +LD+HPGGD+VIL +TG+DATDDFED GHS  A+ ++ ++Y+G++D ++
Subjt:  LYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A1.4e-4260.45Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS-SAIPEL---KTEQLD
        MP+++ LYS++E + H+  DDCW+VIDGKVYD++SY+DEHPGGDDV+LA  G+DATDDFEDAGHSKDARELM+K++IGELD SS   IPEL   K +Q  
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS-SAIPEL---KTEQLD

Query:  DYAARVQGLAKQYWAAPVAMLGISVVIGWLFLRK
        D   ++  L KQYW  PV+++ ISV +  LF RK
Subjt:  DYAARVQGLAKQYWAAPVAMLGISVVIGWLFLRK

AT2G32720.1 cytochrome B5 isoform B3.1e-2655Show/hide
Query:  SNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS
        + ++++ E+S H+   DCWIVI+GKVY++T +L++HPGGDDV+L++TG+DATDDFED GHS+ ARE+M+++Y+GE+D ++
Subjt:  SNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS

AT2G46650.1 cytochrome B5 isoform C1.3e-2440.48Show/hide
Query:  ISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAI------PELKTEQLDD
        ++NL S  +++ H   +DCWI+I GKVYD+++++DEHPGGD+V+LA TG+DA+ DFED  HSKDA+ELM+K+ IG++D S+  +      P  K     +
Subjt:  ISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAI------PELKTEQLDD

Query:  YAARVQGLAKQYWAAPVAMLGISVVI
              G     +  P+ +LG++  +
Subjt:  YAARVQGLAKQYWAAPVAMLGISVVI

AT5G48810.1 cytochrome B5 isoform D4.1e-2657.69Show/hide
Query:  LYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS
        ++++ E+S HSS  DCWIVIDGKVYD+T +LD+HPGGD+VIL +TG+DATDDFED GHS  A+ ++ ++Y+G++D ++
Subjt:  LYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASS

AT5G53560.1 cytochrome B5 isoform E2.8e-2741.86Show/hide
Query:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA
        M S   + S +E+S H+   DCW++I GKVYD+T ++D+HPGGD+V+L++TG+DAT+DFED GHS  AR++M K++IGE+D  SS++P  +T       A
Subjt:  MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAA

Query:  RVQGLAKQY------WAAPVAMLGISVVI
          Q    ++      +  P+ +LG+++V+
Subjt:  RVQGLAKQY------WAAPVAMLGISVVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGCATCTCGAACCTATATTCGATTCAAGAAATCTCACACCACAGTTCCAACGACGACTGTTGGATTGTTATCGATGGCAAGGTATACGATTTGACGTCATATTT
GGACGAGCATCCTGGTGGAGATGATGTTATTCTTGCAGCAACTGGCAGAGATGCCACAGATGACTTTGAAGATGCCGGTCATAGCAAAGACGCAAGAGAACTGATGCAGA
AGTTCTATATTGGTGAGCTTGATGCATCTTCTTCAGCAATCCCAGAACTCAAAACGGAGCAACTCGACGATTATGCAGCTCGGGTTCAGGGCTTGGCAAAGCAATACTGG
GCTGCTCCTGTTGCAATGCTTGGTATTTCTGTGGTAATTGGCTGGTTATTCTTGCGCAAAAAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAGCATCTCGAACCTATATTCGATTCAAGAAATCTCACACCACAGTTCCAACGACGACTGTTGGATTGTTATCGATGGCAAGGTATACGATTTGACGTCATATTT
GGACGAGCATCCTGGTGGAGATGATGTTATTCTTGCAGCAACTGGCAGAGATGCCACAGATGACTTTGAAGATGCCGGTCATAGCAAAGACGCAAGAGAACTGATGCAGA
AGTTCTATATTGGTGAGCTTGATGCATCTTCTTCAGCAATCCCAGAACTCAAAACGGAGCAACTCGACGATTATGCAGCTCGGGTTCAGGGCTTGGCAAAGCAATACTGG
GCTGCTCCTGTTGCAATGCTTGGTATTTCTGTGGTAATTGGCTGGTTATTCTTGCGCAAAAAA
Protein sequenceShow/hide protein sequence
MPSISNLYSIQEISHHSSNDDCWIVIDGKVYDLTSYLDEHPGGDDVILAATGRDATDDFEDAGHSKDARELMQKFYIGELDASSSAIPELKTEQLDDYAARVQGLAKQYW
AAPVAMLGISVVIGWLFLRKK