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MS001026 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001026
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionJ domain-containing protein
Genome locationscaffold36:929105..930415
RNA-Seq ExpressionMS001026
SyntenyMS001026
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064778.1 DnaJ domain-containing protein [Cucumis melo var. makuwa]6.3e-3857.53Show/hide
Query:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----
        D ASAS   DSDTNFDVEN+MK QSEV  CS PENA    CCLL EL+ NS+EN P    + +D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ    
Subjt:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----

Query:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                          DEENIN+KEQ R DVRKEL  +EM CTDMASLLRGLGIQVG+ L PSSQE K
Subjt:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

XP_008445431.1 PREDICTED: uncharacterized protein LOC103488453 [Cucumis melo]3.7e-3857.53Show/hide
Query:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----
        D ASAS   DSDTNFDVEN+MK QSEV  CS PENA    CCLL EL+ NS+EN P    + +D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ    
Subjt:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----

Query:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                          DEENIN+KEQ R DVRKEL  +EM CTDMASLLRGLGIQVG+ L PSSQEV+
Subjt:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

XP_022131619.1 uncharacterized protein LOC111004748 [Momordica charantia]1.7e-4363.07Show/hide
Query:  VDSDTNFDVENEMKLQSEVVVCSGPENAGDFCCLLPELERNSSENIPLPSQAVRDRIERERLKETDEYRRAMEEEWRTRKQQLQIQ--------------
        VDSDTNFDVENEMKLQSEVVVCSGPENAGDFC +                       ERERLKETDEYRRAMEEEWRTRKQQLQIQ              
Subjt:  VDSDTNFDVENEMKLQSEVVVCSGPENAGDFCCLLPELERNSSENIPLPSQAVRDRIERERLKETDEYRRAMEEEWRTRKQQLQIQ--------------

Query:  ------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQE++
Subjt:  ------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

XP_023546909.1 uncharacterized protein LOC111805871 [Cucurbita pepo subsp. pepo]2.8e-3858.06Show/hide
Query:  DMASAS-QVDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----
        D ASAS +VDSDTNFDVEN+MK +S+V  CS  +NA    CCLL   + NS+EN  L   AV+D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ    
Subjt:  DMASAS-QVDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----

Query:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                          DEENINLKEQ RV+VRKEL K+EM CTDMASLLRGLGIQVG+GLHPSSQEV+
Subjt:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

XP_038886123.1 uncharacterized protein LOC120076385 [Benincasa hispida]2.8e-3857.45Show/hide
Query:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ--AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ--
        D ASAS   DSDTNFDVEN+MK QSEV  C  PEN     CCLL EL+ NS+EN PL      V+D + ERERLKETDEYRRAMEEEW TR+Q+LQIQ  
Subjt:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQ--AVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ--

Query:  ------------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                            DEENINLKE+ RVDVRKEL K+EM CTDMASLLRGLGIQ+G+GL PSSQEV+
Subjt:  ------------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

TrEMBL top hitse value%identityAlignment
A0A1S3BCQ4 uncharacterized protein LOC1034884531.8e-3857.53Show/hide
Query:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----
        D ASAS   DSDTNFDVEN+MK QSEV  CS PENA    CCLL EL+ NS+EN P    + +D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ    
Subjt:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----

Query:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                          DEENIN+KEQ R DVRKEL  +EM CTDMASLLRGLGIQVG+ L PSSQEV+
Subjt:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

A0A5A7VB02 DnaJ domain-containing protein3.1e-3857.53Show/hide
Query:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----
        D ASAS   DSDTNFDVEN+MK QSEV  CS PENA    CCLL EL+ NS+EN P    + +D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ    
Subjt:  DMASASQ-VDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----

Query:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                          DEENIN+KEQ R DVRKEL  +EM CTDMASLLRGLGIQVG+ L PSSQE K
Subjt:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

A0A6J1BQR9 uncharacterized protein LOC1110047488.3e-4463.07Show/hide
Query:  VDSDTNFDVENEMKLQSEVVVCSGPENAGDFCCLLPELERNSSENIPLPSQAVRDRIERERLKETDEYRRAMEEEWRTRKQQLQIQ--------------
        VDSDTNFDVENEMKLQSEVVVCSGPENAGDFC +                       ERERLKETDEYRRAMEEEWRTRKQQLQIQ              
Subjt:  VDSDTNFDVENEMKLQSEVVVCSGPENAGDFCCLLPELERNSSENIPLPSQAVRDRIERERLKETDEYRRAMEEEWRTRKQQLQIQ--------------

Query:  ------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQE++
Subjt:  ------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

A0A6J1HCZ3 uncharacterized protein LOC1114628411.5e-3757.53Show/hide
Query:  DMASAS-QVDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----
        D ASAS +VDSDTN DVEN+MK +SEV  CS  +NA    CCLL   + NS+EN  L    V+D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ    
Subjt:  DMASAS-QVDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----

Query:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                          DEENINLKEQ RV+VRKEL K+EM CTDMASLLRGLGIQVG+GLHPSSQEV+
Subjt:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

A0A6J1K4A4 uncharacterized protein LOC1114921543.4e-3757.53Show/hide
Query:  DMASAS-QVDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----
        D ASAS +VDSDTNFDVEN+MK +SEV  CS  +NA    CCLL   + NS+EN  L    V+D I ERERLKETDEYRRAMEEEW TR+Q+LQIQ    
Subjt:  DMASAS-QVDSDTNFDVENEMKLQSEVVVCSGPENA-GDFCCLLPELERNSSENIPLPSQAVRDRI-ERERLKETDEYRRAMEEEWRTRKQQLQIQ----

Query:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK
                                          DEENINLKEQ RV+VRKEL K+EM CTDMASLLRGLGIQVG+G HPSSQEV+
Subjt:  ----------------------------------DEENINLKEQFRVDVRKELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G69060.1 Chaperone DnaJ-domain superfamily protein8.0e-1540.32Show/hide
Query:  AVRDRIERERLKETDEYRRAMEEEWRTRKQQLQIQ--------------------------------------DEENINLKEQFRVDVRKELRKVEMKCT
        A+   + RE LKETDEY+RA EEEW +R++QLQIQ                                      DEEN+N+KE+ R ++ K L+ +E+K  
Subjt:  AVRDRIERERLKETDEYRRAMEEEWRTRKQQLQIQ--------------------------------------DEENINLKEQFRVDVRKELRKVEMKCT

Query:  DMASLLRGLGIQVGTGLHPSSQEV
        +MA+LLRGLGIQVG G+ P   EV
Subjt:  DMASLLRGLGIQVGTGLHPSSQEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATATGGCCTCTGCTTCTCAGGTTGATTCTGATACAAATTTTGATGTAGAAAATGAAATGAAGTTGCAATCTGAAGTGGTAGTTTGTTCTGGTCCTGAAAATGCAGGAGA
TTTCTGTTGTTTGCTGCCTGAATTAGAGAGAAATTCATCTGAAAATATTCCTCTTCCATCCCAAGCTGTGAGGGATAGGATTGAAAGAGAGAGGTTGAAAGAGACTGATG
AGTATAGGCGAGCAATGGAAGAAGAATGGAGAACTAGGAAACAACAGTTACAAATTCAGGATGAGGAAAATATAAACTTGAAGGAACAATTTCGTGTTGATGTAAGAAAA
GAGCTTAGAAAGGTGGAAATGAAGTGCACTGATATGGCCTCCTTGTTACGTGGCCTGGGCATTCAAGTTGGAACTGGCTTACATCCTTCCTCACAAGAGGTAAAA
mRNA sequenceShow/hide mRNA sequence
GATATGGCCTCTGCTTCTCAGGTTGATTCTGATACAAATTTTGATGTAGAAAATGAAATGAAGTTGCAATCTGAAGTGGTAGTTTGTTCTGGTCCTGAAAATGCAGGAGA
TTTCTGTTGTTTGCTGCCTGAATTAGAGAGAAATTCATCTGAAAATATTCCTCTTCCATCCCAAGCTGTGAGGGATAGGATTGAAAGAGAGAGGTTGAAAGAGACTGATG
AGTATAGGCGAGCAATGGAAGAAGAATGGAGAACTAGGAAACAACAGTTACAAATTCAGGATGAGGAAAATATAAACTTGAAGGAACAATTTCGTGTTGATGTAAGAAAA
GAGCTTAGAAAGGTGGAAATGAAGTGCACTGATATGGCCTCCTTGTTACGTGGCCTGGGCATTCAAGTTGGAACTGGCTTACATCCTTCCTCACAAGAGGTAAAA
Protein sequenceShow/hide protein sequence
DMASASQVDSDTNFDVENEMKLQSEVVVCSGPENAGDFCCLLPELERNSSENIPLPSQAVRDRIERERLKETDEYRRAMEEEWRTRKQQLQIQDEENINLKEQFRVDVRK
ELRKVEMKCTDMASLLRGLGIQVGTGLHPSSQEVK