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MS001028 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001028
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold36:938985..939323
RNA-Seq ExpressionMS001028
SyntenyMS001028
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647257.1 hypothetical protein Csa_018305, partial [Cucumis sativus]5.7e-1045.67Show/hide
Query:  KASLRMEDFG--AAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSSPGWISVPESKSKQSVDRDSTSSTPNVHFGYRESFY-----
        KA   MEDFG  AAEFPGFQTN AH+DD+VYR  L TRLQ  AP P SL   RPT   S  G    P    + + +  S SST N       SF+     
Subjt:  KASLRMEDFG--AAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSSPGWISVPESKSKQSVDRDSTSSTPNVHFGYRESFY-----

Query:  -------IPSMFESRYVVEQNITNKPS
                PS+FES  V+E+N+T K S
Subjt:  -------IPSMFESRYVVEQNITNKPS

XP_015895207.1 uncharacterized protein LOC107429071 [Ziziphus jujuba]2.1e-0438.05Show/hide
Query:  MEDFGAAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSS--PGWISVPESKSKQSVDRDSTSSTPNVHFGYRES-------FYIPS
        ME+ G  +FPGFQT  AHKDD+V+R  L  RLQ RAP P  L   +P VS++S   G  S+  S +  S    S+SS+    F + +          +PS
Subjt:  MEDFGAAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSS--PGWISVPESKSKQSVDRDSTSSTPNVHFGYRES-------FYIPS

Query:  MFESRYVVEQNIT
        + ES  + ++N T
Subjt:  MFESRYVVEQNIT

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ2 Uncharacterized protein2.7e-1045.67Show/hide
Query:  KASLRMEDFG--AAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSSPGWISVPESKSKQSVDRDSTSSTPNVHFGYRESFY-----
        KA   MEDFG  AAEFPGFQTN AH+DD+VYR  L TRLQ  AP P SL   RPT   S  G    P    + + +  S SST N       SF+     
Subjt:  KASLRMEDFG--AAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSSPGWISVPESKSKQSVDRDSTSSTPNVHFGYRESFY-----

Query:  -------IPSMFESRYVVEQNITNKPS
                PS+FES  V+E+N+T K S
Subjt:  -------IPSMFESRYVVEQNITNKPS

A0A6A1V1J8 Uncharacterized protein5.0e-0439.09Show/hide
Query:  MEDFGAAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSSPGWISVPESKSKQSVDRDSTSSTPNVHFGYRE------SFYIPSMFE
        ME+  +AEFPGFQT   HKDD VYR+ L +RLQ RAP P  L        ++ P   + P      S    S+SS+ N  +  ++         +PS+ E
Subjt:  MEDFGAAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSSPGWISVPESKSKQSVDRDSTSSTPNVHFGYRE------SFYIPSMFE

Query:  SRYVVEQNIT
        S YV E NIT
Subjt:  SRYVVEQNIT

A0A6P4AEF0 uncharacterized protein LOC1074290711.0e-0438.05Show/hide
Query:  MEDFGAAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSS--PGWISVPESKSKQSVDRDSTSSTPNVHFGYRES-------FYIPS
        ME+ G  +FPGFQT  AHKDD+V+R  L  RLQ RAP P  L   +P VS++S   G  S+  S +  S    S+SS+    F + +          +PS
Subjt:  MEDFGAAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSS--PGWISVPESKSKQSVDRDSTSSTPNVHFGYRES-------FYIPS

Query:  MFESRYVVEQNIT
        + ES  + ++N T
Subjt:  MFESRYVVEQNIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGCAAGCTTGAGAATGGAAGATTTTGGTGCAGCTGAGTTTCCTGGCTTCCAAACCAATGGGGCACACAAAGATGACGTCGTCTATCGAAATCCTTTGATCACTCGGTT
GCAGCATCGAGCCCCCCCCCCATCCTCTTTAGCTACACATCGTCCTACTGTCTCTACCTCTTCCCCCGGTTGGATCAGTGTACCAGAATCGAAATCGAAACAATCAGTTG
ATAGGGACTCTACTTCTTCTACACCTAATGTACATTTTGGTTATAGAGAATCCTTTTACATTCCATCAATGTTTGAATCTCGCTATGTTGTAGAGCAAAATATTACAAAT
AAACCAAGT
mRNA sequenceShow/hide mRNA sequence
AAGGCAAGCTTGAGAATGGAAGATTTTGGTGCAGCTGAGTTTCCTGGCTTCCAAACCAATGGGGCACACAAAGATGACGTCGTCTATCGAAATCCTTTGATCACTCGGTT
GCAGCATCGAGCCCCCCCCCCATCCTCTTTAGCTACACATCGTCCTACTGTCTCTACCTCTTCCCCCGGTTGGATCAGTGTACCAGAATCGAAATCGAAACAATCAGTTG
ATAGGGACTCTACTTCTTCTACACCTAATGTACATTTTGGTTATAGAGAATCCTTTTACATTCCATCAATGTTTGAATCTCGCTATGTTGTAGAGCAAAATATTACAAAT
AAACCAAGT
Protein sequenceShow/hide protein sequence
KASLRMEDFGAAEFPGFQTNGAHKDDVVYRNPLITRLQHRAPPPSSLATHRPTVSTSSPGWISVPESKSKQSVDRDSTSSTPNVHFGYRESFYIPSMFESRYVVEQNITN
KPS