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MS001037 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001037
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold36:1008882..1009097
RNA-Seq ExpressionMS001037
SyntenyMS001037
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585262.1 hypothetical protein SDJN03_17995, partial [Cucurbita argyrosperma subsp. sororia]4.6e-0548.05Show/hide
Query:  ILSNNVIGGRRL----GVVMEISSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN
        ++SNN+ G RRL    G+ +E S  S +  S+S +  + KKKK       K +  GS  VY NADYLTHMHHPPKHN
Subjt:  ILSNNVIGGRRL----GVVMEISSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN

KAG7020185.1 hypothetical protein SDJN02_16868, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-0548.05Show/hide
Query:  ILSNNVIGGRRL----GVVMEISSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN
        ++SNN+ G RRL    G+ +E S  S +  S+S +  + KKKK       K +  GS  VY NADYLTHMHHPPKHN
Subjt:  ILSNNVIGGRRL----GVVMEISSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN

XP_022951917.1 uncharacterized protein LOC111454657 [Cucurbita moschata]2.7e-0548.05Show/hide
Query:  ILSNNVIGGRRL----GVVMEISSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN
        ++SNN+ G RRL    G+ +E S  S +  S+S +  + KKKK      +K +  GS  VY NADYLTHMHHPPKHN
Subjt:  ILSNNVIGGRRL----GVVMEISSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN

XP_023002074.1 uncharacterized protein LOC111496054 [Cucurbita maxima]6.0e-0550.63Show/hide
Query:  ILSNNVIGGRRL----GVVMEI--SSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN
        +LSNN+ G RRL    G+ +E   SSK  V  S +  +G KKKKK            GS  VY NADYLTHMHHPPKHN
Subjt:  ILSNNVIGGRRL----GVVMEI--SSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN

XP_031743130.1 uncharacterized protein LOC105435861 isoform X1 [Cucumis sativus]1.7e-0444.57Show/hide
Query:  ILSNNVIGGRRLGVVMEI----SSKSL-----------VDFSTSSS--SGDKKKKKMRI--IIPRKLISRGSESVY-NADYLTHMHHPPKHN
        +L NN IGGRRLG   E     +SKS            + FS++S+  +G KK KK  +  +  +K+   GS  VY NADYLT+MHHPPKHN
Subjt:  ILSNNVIGGRRLGVVMEI----SSKSL-----------VDFSTSSS--SGDKKKKKMRI--IIPRKLISRGSESVY-NADYLTHMHHPPKHN

TrEMBL top hitse value%identityAlignment
A0A0A0KHA3 Uncharacterized protein8.4e-0544.57Show/hide
Query:  ILSNNVIGGRRLGVVMEI----SSKSL-----------VDFSTSSS--SGDKKKKKMRI--IIPRKLISRGSESVY-NADYLTHMHHPPKHN
        +L NN IGGRRLG   E     +SKS            + FS++S+  +G KK KK  +  +  +K+   GS  VY NADYLT+MHHPPKHN
Subjt:  ILSNNVIGGRRLGVVMEI----SSKSL-----------VDFSTSSS--SGDKKKKKMRI--IIPRKLISRGSESVY-NADYLTHMHHPPKHN

A0A6J1GIZ1 uncharacterized protein LOC1114546571.3e-0548.05Show/hide
Query:  ILSNNVIGGRRL----GVVMEISSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN
        ++SNN+ G RRL    G+ +E S  S +  S+S +  + KKKK      +K +  GS  VY NADYLTHMHHPPKHN
Subjt:  ILSNNVIGGRRL----GVVMEISSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN

A0A6J1KPF0 uncharacterized protein LOC1114960542.9e-0550.63Show/hide
Query:  ILSNNVIGGRRL----GVVMEI--SSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN
        +LSNN+ G RRL    G+ +E   SSK  V  S +  +G KKKKK            GS  VY NADYLTHMHHPPKHN
Subjt:  ILSNNVIGGRRL----GVVMEI--SSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVY-NADYLTHMHHPPKHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTTGAGCAACAACGTTATTGGAGGAAGAAGATTGGGAGTGGTAATGGAAATTAGCAGCAAAAGCTTGGTGGATTTTTCAACTTCTTCTTCCAGTGGTGACAAAAAGAA
GAAGAAGATGAGGATAATTATTCCAAGGAAATTGATTAGCAGAGGGTCTGAATCAGTTTATAATGCTGATTATTTGACTCATATGCATCACCCTCCAAAACATAAC
mRNA sequenceShow/hide mRNA sequence
ATTTTGAGCAACAACGTTATTGGAGGAAGAAGATTGGGAGTGGTAATGGAAATTAGCAGCAAAAGCTTGGTGGATTTTTCAACTTCTTCTTCCAGTGGTGACAAAAAGAA
GAAGAAGATGAGGATAATTATTCCAAGGAAATTGATTAGCAGAGGGTCTGAATCAGTTTATAATGCTGATTATTTGACTCATATGCATCACCCTCCAAAACATAAC
Protein sequenceShow/hide protein sequence
ILSNNVIGGRRLGVVMEISSKSLVDFSTSSSSGDKKKKKMRIIIPRKLISRGSESVYNADYLTHMHHPPKHN