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MS001069 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001069
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60s ribosomal protein l2
Genome locationscaffold36:1241635..1241745
RNA-Seq ExpressionMS001069
SyntenyMS001069
Gene Ontology termsGO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031822.1 60s ribosomal protein l2 [Cucumis melo var. makuwa]7.1e-1083.78Show/hide
Query:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        +TIER SLSIPSHTGREVKWQGH  VWL  EYSSHPN
Subjt:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
KAA0032895.1 60s ribosomal protein l2 [Cucumis melo var. makuwa]5.2e-1397.3Show/hide
Query:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        VTIER SLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
Subjt:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
KAA0051145.1 ribosomal protein L2 [Cucumis melo var. makuwa]2.1e-0981.08Show/hide
Query:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        +TIER SLSIPSHTGR+VKWQGH PVWL+AEYS H N
Subjt:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
TrEMBL top hitse value%identityAlignment
A0A5A7SUL2 60s ribosomal protein l22.5e-1397.3Show/hide
Query:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        VTIER SLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
Subjt:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
A0A5D3BBV8 60s ribosomal protein l23.4e-1083.78Show/hide
Query:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        +TIER SLSIPSHTGREVKWQGH  VWL  EYSSHPN
Subjt:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
A0A5D3BXG0 Ribosomal protein L2 (Mitochondrion)9.9e-1081.08Show/hide
Query:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
        +TIER SLSIPSHTGR+VKWQGH PVWL+AEYS H N
Subjt:  VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN
A0A6N2KQX0 Ribosomal_L2 domain-containing protein8.7e-0696.15Show/hide
Query:  VTIERLSLSIPSHTGREVKWQGHTPV
        VTIERLSLSIPSHTGREVKWQGHTP+
Subjt:  VTIERLSLSIPSHTGREVKWQGHTPV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGACAATTGAGAGGTTGTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCGTTTGGCTCCTCGCGGAGTATAGCTCACATCCAAA
C
mRNA sequenceShow/hide mRNA sequence
GTGACAATTGAGAGGTTGTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCGTTTGGCTCCTCGCGGAGTATAGCTCACATCCAAA
C
Protein sequenceShow/hide protein sequence
VTIERLSLSIPSHTGREVKWQGHTPVWLLAEYSSHPN