; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001084 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001084
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWW domain-containing protein
Genome locationscaffold36:1360866..1361809
RNA-Seq ExpressionMS001084
SyntenyMS001084
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001202 - WW domain
IPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585292.1 hypothetical protein SDJN03_18025, partial [Cucurbita argyrosperma subsp. sororia]2.5e-7475.76Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE
        MVPFQ  PSSLNDKR  +R+ ++ LAKKRKWE      P  PP  NSIFDIELHLETPLP DWQRCLDIQSGKIHFYNTTT KRTSKDPRD+LD +DD E
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE

Query:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW
          E D+DMSLDLELNLTC+SLDKN++Q TQGGR+ + G+FGSSENY  + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NSPE T PAMLKRRC LSW
Subjt:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW

XP_022132079.1 uncharacterized protein LOC111005038, partial [Momordica charantia]2.7e-10097.89Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE
        MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWE QL  PPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQ+DKNDDEE
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE

Query:  EDDDDMSLDLELNLTCDSLDKNSNQTQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRR
        EDDDDMSLDLELNLTCDSLDKNSNQTQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRR
Subjt:  EDDDDMSLDLELNLTCDSLDKNSNQTQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRR

XP_022952019.1 uncharacterized protein LOC111454730 [Cucurbita moschata]2.5e-7475.25Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE
        MVPFQ  PSSLNDKR+ +R  ++ LAKKRKWE      P  PP  NSIFD+ELHLETPLP DWQRCLDIQSGKIHFYNTTT KRTSKDPRD+LD +DD E
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE

Query:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW
          E D+DMSLDLELNLTC+S DKN+NQ TQGGR+ + G+FGSSENY  + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NSPE T PAMLKRRC LSW
Subjt:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW

XP_023002678.1 uncharacterized protein LOC111496462 [Cucurbita maxima]1.0e-7576.77Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE
        MVPFQ  PSSLNDKR  +RDP++ LAKKRKWE      P  PP  NSIFDIELHLETPLP DWQRCLDIQSGKIHFYNTTT KRTSKDPRD+LD +DD E
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE

Query:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW
          E ++DMSLDLELNLTC+SLDKN+NQ TQGGR+ + G+FGSSENY  + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NSPE T PAMLKRRC LSW
Subjt:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW

XP_023538128.1 uncharacterized protein LOC111798987 [Cucurbita pepo subsp. pepo]9.6e-7475.25Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE
        MVPFQ  PSS NDKR  +R+ ++ LAKKRKWE      P  PP  NSIFDIELHLETPLP DWQRCLDIQSG+IHFYNTTT KRTSKDPRD+LD +DD E
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE

Query:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW
          E D+DMSLDLELNLTC+SLDKN+NQ TQGGR+ + G+FGSSENY  + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NSPE T PAMLKRRC LSW
Subjt:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW

TrEMBL top hitse value%identityAlignment
A0A1S3BAS4 uncharacterized protein LOC1034880581.0e-6568.69Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQL---DKND
        MVPFQ  PSSLNDK  AI++P D LAKKRKWE+ +    P PPP NS+ DIELHLETPLP  WQRCLDIQSGKIHFYN TT KRT +DPRD+L   D +D
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQL---DKND

Query:  DEEE--DDD-----DMSLDLELNLTCDSLDKNSNQ--TQGGRQDLNG--LFGSSENYSN----RKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNS-PEH
        D+EE  DDD     DMSLDLELNLTC+S+DKN+N    QG R+ +N   +FG SENY+N    + EMVAAVCMRCHLLVMLCKSSPECPNCKFMNS PE 
Subjt:  DEEE--DDD-----DMSLDLELNLTCDSLDKNSNQ--TQGGRQDLNG--LFGSSENYSN----RKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNS-PEH

Query:  TPPAMLKRRCRLSW
        T PAM KRRC LSW
Subjt:  TPPAMLKRRCRLSW

A0A5A7VAF4 WW domain-containing protein1.0e-6568.69Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQL---DKND
        MVPFQ  PSSLNDK  AI++P D LAKKRKWE+ +    P PPP NS+ DIELHLETPLP  WQRCLDIQSGKIHFYN TT KRT +DPRD+L   D +D
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQL---DKND

Query:  DEEE--DDD-----DMSLDLELNLTCDSLDKNSNQ--TQGGRQDLNG--LFGSSENYSN----RKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNS-PEH
        D+EE  DDD     DMSLDLELNLTC+S+DKN+N    QG R+ +N   +FG SENY+N    + EMVAAVCMRCHLLVMLCKSSPECPNCKFMNS PE 
Subjt:  DEEE--DDD-----DMSLDLELNLTCDSLDKNSNQ--TQGGRQDLNG--LFGSSENYSN----RKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNS-PEH

Query:  TPPAMLKRRCRLSW
        T PAM KRRC LSW
Subjt:  TPPAMLKRRCRLSW

A0A6J1BS22 uncharacterized protein LOC1110050381.3e-10097.89Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE
        MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWE QL  PPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQ+DKNDDEE
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE

Query:  EDDDDMSLDLELNLTCDSLDKNSNQTQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRR
        EDDDDMSLDLELNLTCDSLDKNSNQTQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRR
Subjt:  EDDDDMSLDLELNLTCDSLDKNSNQTQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRR

A0A6J1GKF5 uncharacterized protein LOC1114547301.2e-7475.25Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE
        MVPFQ  PSSLNDKR+ +R  ++ LAKKRKWE      P  PP  NSIFD+ELHLETPLP DWQRCLDIQSGKIHFYNTTT KRTSKDPRD+LD +DD E
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE

Query:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW
          E D+DMSLDLELNLTC+S DKN+NQ TQGGR+ + G+FGSSENY  + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NSPE T PAMLKRRC LSW
Subjt:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW

A0A6J1KU99 uncharacterized protein LOC1114964625.0e-7676.77Show/hide
Query:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE
        MVPFQ  PSSLNDKR  +RDP++ LAKKRKWE      P  PP  NSIFDIELHLETPLP DWQRCLDIQSGKIHFYNTTT KRTSKDPRD+LD +DD E
Subjt:  MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEE

Query:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW
          E ++DMSLDLELNLTC+SLDKN+NQ TQGGR+ + G+FGSSENY  + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NSPE T PAMLKRRC LSW
Subjt:  --EDDDDMSLDLELNLTCDSLDKNSNQ-TQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22250.1 unknown protein8.0e-1051.11Show/hide
Query:  GSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHT
        G  ++   ++EM+  VCM+CH+LVMLCKS+  CPNCKFM+  +H+
Subjt:  GSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHT

AT1G78170.1 unknown protein7.2e-1133.33Show/hide
Query:  KKRKWEDQ-----LPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEEEDDDDMSLDLELNLTCD----
        KK K EDQ         P     ++  FD ELHL TPLPSDWQ              T    RTS + R      D        MSLDLELNL+      
Subjt:  KKRKWEDQ-----LPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEEEDDDDMSLDLELNLTCD----

Query:  -----------------SLDKNSNQTQGGRQDLNG-----------LFGSSENYSNRK--EMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAML
                         S  K    T   ++ + G             G  +N  + K  EMV  VCM+CH+LVMLC S+P CPNCKFM+  +H+   + 
Subjt:  -----------------SLDKNSNQTQGGRQDLNG-----------LFGSSENYSNRK--EMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAML

Query:  K
        K
Subjt:  K

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)4.5e-0525.6Show/hide
Query:  IELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEEEDDDDMSLDLELNLTCDSLDKNSNQTQGGRQDLNGLFGSSENYSNRKE--
        +EL+    LP  W++CLD+++G+I++ N     R  +DPR  ++ + D  +    +  + E +   DS + +S  +   R++        E     +E  
Subjt:  IELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEEEDDDDMSLDLELNLTCDSLDKNSNQTQGGRQDLNGLFGSSENYSNRKE--

Query:  MVAAVCMRCHLLVMLCKSSPECPNC
        +V A C  C +  M+ K   +CP C
Subjt:  MVAAVCMRCHLLVMLCKSSPECPNC

AT4G08910.1 unknown protein4.2e-1135.71Show/hide
Query:  KRTSKDPRDQLDKNDDEEEDDDDMSLDLELNLTCDSLDKN-----SNQTQGGRQD-----------LNGL-------------------FGSSENYSNRK
        +R   +    ++ N +E  +   MSLDLELNL+   +D N     SN  +G  +D           + GL                    G      + +
Subjt:  KRTSKDPRDQLDKNDDEEEDDDDMSLDLELNLTCDSLDKN-----SNQTQGGRQD-----------LNGL-------------------FGSSENYSNRK

Query:  EMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAML
        EMVA VCM+CH+LVMLCK+SP CPNCKFM+SPE T  ++L
Subjt:  EMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAML


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCCTTCCAGCCACTCCCTTCTTCTCTGAACGACAAGAGAGTAGCAATTCGAGATCCTACAGATCCTTTGGCAAAGAAGAGGAAATGGGAAGATCAATTGCCGCC
GCCGCCGCCACCGCCGCCGCCGCAAAATTCCATATTCGATATCGAGCTTCACCTCGAAACTCCGCTACCTTCCGACTGGCAGAGATGCCTTGACATTCAGTCGGGGAAGA
TACACTTCTACAACACGACGACTAATAAGAGAACATCAAAGGATCCAAGAGACCAACTCGATAAAAATGACGATGAGGAGGAAGACGACGACGACATGAGTTTGGACCTA
GAACTAAACCTGACATGTGACTCGCTCGACAAGAACAGTAACCAAACGCAAGGCGGCCGCCAAGACCTAAATGGTTTGTTTGGGTCGTCGGAAAATTATAGTAATCGGAA
GGAGATGGTGGCGGCTGTTTGCATGAGGTGCCACTTGCTAGTGATGCTGTGTAAATCCTCGCCGGAGTGTCCTAACTGCAAATTCATGAACTCGCCGGAGCACACCCCGC
CGGCGATGCTCAAGCGGCGGTGTCGCCTTTCATGG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCCTTCCAGCCACTCCCTTCTTCTCTGAACGACAAGAGAGTAGCAATTCGAGATCCTACAGATCCTTTGGCAAAGAAGAGGAAATGGGAAGATCAATTGCCGCC
GCCGCCGCCACCGCCGCCGCCGCAAAATTCCATATTCGATATCGAGCTTCACCTCGAAACTCCGCTACCTTCCGACTGGCAGAGATGCCTTGACATTCAGTCGGGGAAGA
TACACTTCTACAACACGACGACTAATAAGAGAACATCAAAGGATCCAAGAGACCAACTCGATAAAAATGACGATGAGGAGGAAGACGACGACGACATGAGTTTGGACCTA
GAACTAAACCTGACATGTGACTCGCTCGACAAGAACAGTAACCAAACGCAAGGCGGCCGCCAAGACCTAAATGGTTTGTTTGGGTCGTCGGAAAATTATAGTAATCGGAA
GGAGATGGTGGCGGCTGTTTGCATGAGGTGCCACTTGCTAGTGATGCTGTGTAAATCCTCGCCGGAGTGTCCTAACTGCAAATTCATGAACTCGCCGGAGCACACCCCGC
CGGCGATGCTCAAGCGGCGGTGTCGCCTTTCATGG
Protein sequenceShow/hide protein sequence
MVPFQPLPSSLNDKRVAIRDPTDPLAKKRKWEDQLPPPPPPPPPQNSIFDIELHLETPLPSDWQRCLDIQSGKIHFYNTTTNKRTSKDPRDQLDKNDDEEEDDDDMSLDL
ELNLTCDSLDKNSNQTQGGRQDLNGLFGSSENYSNRKEMVAAVCMRCHLLVMLCKSSPECPNCKFMNSPEHTPPAMLKRRCRLSW