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MS001088 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001088
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMultifunctional methyltransferase subunit TRM112-like protein
Genome locationscaffold36:1376527..1376892
RNA-Seq ExpressionMS001088
SyntenyMS001088
Gene Ontology termsGO:0018364 - peptidyl-glutamine methylation (biological process)
GO:0030488 - tRNA methylation (biological process)
GO:0070476 - rRNA (guanine-N7)-methylation (biological process)
GO:0008168 - methyltransferase activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR005651 - Trm112-like
IPR039127 - Multifunctional methyltransferase subunit Trm112


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575796.1 putative galacturonosyltransferase-like 7, partial [Cucurbita argyrosperma subsp. sororia]3.2e-5992.56Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNM+SSNIKGV NGFPLRIEVEKVVEKQVDFNPDFL+NMFSKIEWKPLVDASRA+GYA+LP+EAESSMLDS DFLQRFHHALLELHLEEGAL+CP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDE
        ET RRFPVNKGIPNLLLHEDE
Subjt:  ETGRRFPVNKGIPNLLLHEDE

XP_022131515.1 multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Momordica charantia]1.6e-63100Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

XP_022954397.1 multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbita moschata]1.1e-5992.62Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNM+SSNIKGV NGFPLRIEVEKVVEKQVDFNPDFL+NMFSKIEWKPLVDASRA+GYA+LP+EAESSMLDS DFLQRFHHALLELHLEEGAL+CP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ET RRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

XP_022991525.1 multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 [Cucurbita maxima]3.2e-5991.8Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNM+SSNIKGV NGFPLRIEVEKVVEKQVDFNPDFL+NMFSKIEWKPLVDASR +GYA+LP+EAESS LDS DFLQRFHHALLELHLEEGAL+CP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

XP_023548932.1 multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbita pepo subsp. pepo]6.4e-6092.62Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNM+SSNIKGV NGFPLRIEVEKVVEKQVDFNPDFL+NMFSKIEWKPLVDASR +GYA+LP+EAESSMLDS DFLQRFHHALLELHLEEGAL+CP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

TrEMBL top hitse value%identityAlignment
A0A6J1BPX2 multifunctional methyltransferase subunit TRM112-like protein At1g222707.9e-64100Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

A0A6J1GPK5 multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X22.0e-5990.98Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNM+SSNIKGV NGFPLR+EVEKVVEKQVDFNPDFL+NMFSKIEWKPLVDASR +GYA+LP+EAES MLDS DFLQRFHHALLELHLEEGAL+CP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

A0A6J1GQW1 multifunctional methyltransferase subunit TRM112-like protein At1g222705.3e-6092.62Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNM+SSNIKGV NGFPLRIEVEKVVEKQVDFNPDFL+NMFSKIEWKPLVDASRA+GYA+LP+EAESSMLDS DFLQRFHHALLELHLEEGAL+CP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ET RRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

A0A6J1JT67 multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X21.5e-5991.8Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNM+SSNIKGV NGFPLRIEVEKVVEKQVDFNPDFL+NMFSKIEWKPLVDASR +GYA+LP+EAESS LDS DFLQRFHHALLELHLEEGAL+CP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ETGRRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

A0A6J1JUC5 multifunctional methyltransferase subunit TRM112-like protein At1g222705.3e-6092.62Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP
        MRLLTHNM+SSNIKGV NGFPLRIEVEKVVEKQVDFNPDFL+NMFSKIEWKPLVDASRA+GYA+LP+EAESSMLDS DFLQRFHHALLELHLEEGAL+CP
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCP

Query:  ETGRRFPVNKGIPNLLLHEDEV
        ET RRFPVNKGIPNLLLHEDEV
Subjt:  ETGRRFPVNKGIPNLLLHEDEV

SwissProt top hitse value%identityAlignment
Q2KIA2 Multifunctional methyltransferase subunit TRM112-like protein5.2e-2845.9Show/hide
Query:  MRLLTHNMISSNIKGVA-NGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVC
        MRLLTHN++SS+++GV   GFPLR++  +V    V+FNPDF+  M  K+EW  L++A+  L    +P E       +++FL++ HH LLE+ + EG L C
Subjt:  MRLLTHNMISSNIKGVA-NGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVC

Query:  PETGRRFPVNKGIPNLLLHEDE
        PE+GR FP+++GIPN+LL ++E
Subjt:  PETGRRFPVNKGIPNLLLHEDE

Q8LFJ5 Multifunctional methyltransferase subunit TRM112 homolog A4.1e-4971.77Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEA-ESSMLDSDD-FLQRFHHALLELHLEEGALV
        MRL+THNM+S NIKGV +GFPLRIE   V+EK+VDFNPDF+R+MF+KIEWK LV+ +R++GYA+LP+E+ ++++L SD+ FL++ HHALLELHLEEGALV
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEA-ESSMLDSDD-FLQRFHHALLELHLEEGALV

Query:  CPETGRRFPVNKGIPNLLLHEDEV
        CPETGR+FPVNKGIPN+LLHEDEV
Subjt:  CPETGRRFPVNKGIPNLLLHEDEV

Q9C9R3 Multifunctional methyltransferase subunit TRM112 homolog B3.2e-4670.16Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEA-ESSMLDSDD-FLQRFHHALLELHLEEGALV
        MRL+ HNM+S NIKGV N FPLRIE EKV  K+VDFNPDFLR MF+KI+WK LVD +R++ Y +LPD A +++ L+SD+ FL++FHHALLELHLEEG+LV
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEA-ESSMLDSDD-FLQRFHHALLELHLEEGALV

Query:  CPETGRRFPVNKGIPNLLLHEDEV
        CPETGR+F V+KGIPN+LLHEDEV
Subjt:  CPETGRRFPVNKGIPNLLLHEDEV

Q9DCG9 Multifunctional methyltransferase subunit TRM112-like protein1.0e-2845.9Show/hide
Query:  MRLLTHNMISSNIKGV-ANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVC
        M+LLTHN++SS+++GV   GFPLR++  +V    V+FNP+F+  M  K+EW  LV A+  L  A++P E        + FL++ HH LLE+ + EG L C
Subjt:  MRLLTHNMISSNIKGV-ANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVC

Query:  PETGRRFPVNKGIPNLLLHEDE
        PE+GR FP+++GIPN+LL+++E
Subjt:  PETGRRFPVNKGIPNLLLHEDE

Q9UI30 Multifunctional methyltransferase subunit TRM112-like protein2.2e-2643.44Show/hide
Query:  MRLLTHNMISSNIKGV-ANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVC
        M+LLTHN++SS+++GV + GFPLR++  +V    V+FNP+F+  M  K+EW   ++A+  L    +P        ++++FL+  HH LLE+ + EG L C
Subjt:  MRLLTHNMISSNIKGV-ANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVC

Query:  PETGRRFPVNKGIPNLLLHEDE
        PE+GR FP+++GIPN+LL E+E
Subjt:  PETGRRFPVNKGIPNLLLHEDE

Arabidopsis top hitse value%identityAlignment
AT1G22270.1 Trm112p-like protein2.9e-5071.77Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEA-ESSMLDSDD-FLQRFHHALLELHLEEGALV
        MRL+THNM+S NIKGV +GFPLRIE   V+EK+VDFNPDF+R+MF+KIEWK LV+ +R++GYA+LP+E+ ++++L SD+ FL++ HHALLELHLEEGALV
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEA-ESSMLDSDD-FLQRFHHALLELHLEEGALV

Query:  CPETGRRFPVNKGIPNLLLHEDEV
        CPETGR+FPVNKGIPN+LLHEDEV
Subjt:  CPETGRRFPVNKGIPNLLLHEDEV

AT1G78190.1 Trm112p-like protein2.3e-4770.16Show/hide
Query:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEA-ESSMLDSDD-FLQRFHHALLELHLEEGALV
        MRL+ HNM+S NIKGV N FPLRIE EKV  K+VDFNPDFLR MF+KI+WK LVD +R++ Y +LPD A +++ L+SD+ FL++FHHALLELHLEEG+LV
Subjt:  MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEA-ESSMLDSDD-FLQRFHHALLELHLEEGALV

Query:  CPETGRRFPVNKGIPNLLLHEDEV
        CPETGR+F V+KGIPN+LLHEDEV
Subjt:  CPETGRRFPVNKGIPNLLLHEDEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTACTGACCCACAACATGATTTCATCCAACATCAAGGGCGTCGCCAATGGCTTCCCTCTCCGGATCGAGGTCGAGAAAGTGGTCGAGAAGCAGGTCGATTTCAA
TCCAGATTTCCTCAGGAACATGTTCTCCAAGATCGAATGGAAACCTCTCGTCGACGCTTCTCGGGCTCTGGGCTACGCCGACCTTCCCGACGAGGCCGAGTCGTCCATGC
TCGACTCCGATGACTTTCTGCAACGATTCCACCACGCCCTTCTCGAGCTGCATCTCGAGGAGGGCGCTCTTGTTTGCCCGGAGACCGGCCGCCGATTCCCCGTCAATAAG
GGTATTCCCAATTTGCTCCTCCACGAAGACGAGGTC
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTACTGACCCACAACATGATTTCATCCAACATCAAGGGCGTCGCCAATGGCTTCCCTCTCCGGATCGAGGTCGAGAAAGTGGTCGAGAAGCAGGTCGATTTCAA
TCCAGATTTCCTCAGGAACATGTTCTCCAAGATCGAATGGAAACCTCTCGTCGACGCTTCTCGGGCTCTGGGCTACGCCGACCTTCCCGACGAGGCCGAGTCGTCCATGC
TCGACTCCGATGACTTTCTGCAACGATTCCACCACGCCCTTCTCGAGCTGCATCTCGAGGAGGGCGCTCTTGTTTGCCCGGAGACCGGCCGCCGATTCCCCGTCAATAAG
GGTATTCCCAATTTGCTCCTCCACGAAGACGAGGTC
Protein sequenceShow/hide protein sequence
MRLLTHNMISSNIKGVANGFPLRIEVEKVVEKQVDFNPDFLRNMFSKIEWKPLVDASRALGYADLPDEAESSMLDSDDFLQRFHHALLELHLEEGALVCPETGRRFPVNK
GIPNLLLHEDEV