CuGenDBv2

Gene ID	MS001093
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	methyl-CpG-binding domain-containing protein 8 isoform X2
Genome location	scaffold36:1408055..1408702
RNA-Seq Expression	MS001093
Synteny	MS001093
Gene Ontology terms	NA
InterPro domains	IPR037472 - Methyl-CpG-binding domain-containing protein 8

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022132083.1 methyl-CpG-binding domain-containing protein 8 isoform X1 [Momordica charantia]

1.6e-109

100

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Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ
        MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ

Query:  SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS
        SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS
Subjt:  SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS

Query:  GCEKRAEEEEIVM
        GCEKRAEEEEIVM
Subjt:  GCEKRAEEEEIVM

XP_022132084.1 methyl-CpG-binding domain-containing protein 8 isoform X2 [Momordica charantia]

4.9e-111

100

Show/hide

Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ
        MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ

Query:  SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS
        SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS
Subjt:  SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS

Query:  GCEKRAEEEEIVMVML
        GCEKRAEEEEIVMVML
Subjt:  GCEKRAEEEEIVMVML

XP_022952018.1 methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita moschata]

1.4e-94

87.1

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Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP
        MASTTMVASPS++ FRMNTLPIIDLRLLSQSELYCLSRFSSSSSS+ SQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSS IRP
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP

Query:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK
        QSP+R D ESA+I+TLFKQLFVG+SHC V++SY D DEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKDSNRF QSNGNA  NS 
Subjt:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK

Query:  SGCEKRAEEEEIVMVML
        SGC+KRAEE+EIVMVML
Subjt:  SGCEKRAEEEEIVMVML

XP_023002677.1 methyl-CpG-binding domain-containing protein 8-like isoform X2 [Cucurbita maxima]

1.4e-94

87.1

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Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP
        MASTTMVASPS++ FRMNTLPIIDLRLLSQSELYCLSRFSSSSSS+ SQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSS IRP
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP

Query:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK
        QSP+R D ESA+I+TLFKQLFVG+SHC V++SY D DEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKDSNRF QSNGNA  NS 
Subjt:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK

Query:  SGCEKRAEEEEIVMVML
        SGC+KRAEE+EIVMVML
Subjt:  SGCEKRAEEEEIVMVML

XP_038885026.1 methyl-CpG-binding domain-containing protein 8 isoform X2 [Benincasa hispida]

2.2e-95

86.22

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Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRF---SSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVI
        MASTTMVASPSN+SFRMN LPIIDLRLLSQSELYCLSRF   SSSSSSTSQSN++DDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQF SSSSSS I
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRF---SSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVI

Query:  RPQSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPN
        RPQSP+RLD ESA+I+TLFKQLFVGD HC V++SYGD DEDLVL+NHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRF QSNGNA P 
Subjt:  RPQSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPN

Query:  SKSGCEKRA------EEEEIVMVML
         KSGC+K A      EEEEIVMVML
Subjt:  SKSGCEKRA------EEEEIVMVML

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BS27 methyl-CpG-binding domain-containing protein 8 isoform X2

2.4e-111

100

Show/hide

Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ
        MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ

Query:  SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS
        SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS
Subjt:  SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS

Query:  GCEKRAEEEEIVMVML
        GCEKRAEEEEIVMVML
Subjt:  GCEKRAEEEEIVMVML

A0A6J1BV99 methyl-CpG-binding domain-containing protein 8 isoform X1

7.6e-110

100

Show/hide

Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ
        MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQ

Query:  SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS
        SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS
Subjt:  SPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKS

Query:  GCEKRAEEEEIVM
        GCEKRAEEEEIVM
Subjt:  GCEKRAEEEEIVM

A0A6J1GJB3 methyl-CpG-binding domain-containing protein 8-like isoform X2

6.9e-95

87.1

Show/hide

Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP
        MASTTMVASPS++ FRMNTLPIIDLRLLSQSELYCLSRFSSSSSS+ SQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSS IRP
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP

Query:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK
        QSP+R D ESA+I+TLFKQLFVG+SHC V++SY D DEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKDSNRF QSNGNA  NS 
Subjt:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK

Query:  SGCEKRAEEEEIVMVML
        SGC+KRAEE+EIVMVML
Subjt:  SGCEKRAEEEEIVMVML

A0A6J1KK67 methyl-CpG-binding domain-containing protein 8-like isoform X2

6.9e-95

87.1

Show/hide

Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP
        MASTTMVASPS++ FRMNTLPIIDLRLLSQSELYCLSRFSSSSSS+ SQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSS IRP
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP

Query:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK
        QSP+R D ESA+I+TLFKQLFVG+SHC V++SY D DEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKDSNRF QSNGNA  NS 
Subjt:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK

Query:  SGCEKRAEEEEIVMVML
        SGC+KRAEE+EIVMVML
Subjt:  SGCEKRAEEEEIVMVML

A0A6J1KLZ0 methyl-CpG-binding domain-containing protein 8-like isoform X1

2.2e-93

86.92

Show/hide

Query:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP
        MASTTMVASPS++ FRMNTLPIIDLRLLSQSELYCLSRFSSSSSS+ SQSN+DDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRK QFPSSSSSS IRP
Subjt:  MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSST-SQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRP

Query:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK
        QSP+R D ESA+I+TLFKQLFVG+SHC V++SY D DEDLVL+NHIYDESVP+SSYAIF SIPVDIIDSSYAPIKRRRGRPRKDSNRF QSNGNA  NS 
Subjt:  QSPERLDAESAKIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSK

Query:  SGCEKRAEEEEIVM
        SGC+KRAEE+EIVM
Subjt:  SGCEKRAEEEEIVM

SwissProt top hits

e value

%identity

Alignment

Q9LME6 Methyl-CpG-binding domain-containing protein 8

8.6e-18

43.96

Show/hide

Query:  TLPIIDLRLLSQSELYCLSRFS----SSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAK---
        +LP+ID RLLSQSEL  LS+ S    SSS+S + S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ P         P SP+R   +S++   
Subjt:  TLPIIDLRLLSQSELYCLSRFS----SSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAK---

Query:  --IITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDSN
          + +L + LF  DS+ + +    DE E+ +  N   +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  --IITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDSN

Arabidopsis top hits

e value

%identity

Alignment

AT1G22310.2 methyl-CPG-binding domain 8

6.1e-19

43.96

Show/hide

Query:  TLPIIDLRLLSQSELYCLSRFS----SSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAK---
        +LP+ID RLLSQSEL  LS+ S    SSS+S + S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ P         P SP+R   +S++   
Subjt:  TLPIIDLRLLSQSELYCLSRFS----SSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESAK---

Query:  --IITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDSN
          + +L + LF  DS+ + +    DE E+ +  N   +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  --IITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDSN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCCACAACCATGGTTGCTTCCCCTTCCAACGAGAGTTTCCGCATGAATACTCTACCAATCATAGATCTCCGTCTCCTCTCTCAATCAGAGCTCTATTGCCTCTC
TCGTTTCTCCTCCTCATCTTCTTCAACCTCCCAATCCAACGACGACGACGACGTCTTAATCCCCAAAATTGATCGATCTGTCTTCAACGAGTCCGCCGGCAGCCGTAAAC
AGACCTATTCGCGCCTCCGTCTGGCCCCTCGCAAACCCCAATTTCCTTCCTCCTCGTCCTCCTCCGTAATTCGCCCCCAATCCCCCGAGCGCCTGGATGCGGAGAGCGCT
AAAATTATCACTCTCTTCAAGCAACTCTTTGTTGGAGACTCTCATTGTACCGTCGACAACAGCTACGGCGACGAAGATGAGGACCTGGTCCTTATTAACCACATTTACGA
CGAATCGGTGCCTGATTCTTCCTATGCGATTTTCCAGAGCATTCCTGTTGATATCATTGACAGCAGTTACGCGCCGATTAAGCGGCGGAGAGGGCGGCCGCGCAAGGATA
GTAATCGGTTTCCTCAGAGTAATGGAAATGCGGTTCCCAACTCCAAAAGCGGATGCGAAAAACGGGCGGAGGAGGAGGAGATCGTAATGGTAATGCTG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MASTTMVASPSNESFRMNTLPIIDLRLLSQSELYCLSRFSSSSSSTSQSNDDDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFPSSSSSSVIRPQSPERLDAESA
KIITLFKQLFVGDSHCTVDNSYGDEDEDLVLINHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFPQSNGNAVPNSKSGCEKRAEEEEIVMVML

MS001093 (gene) of Bitter gourd (TR) v1 genome