; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001101 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001101
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description40S ribosomal protein S6
Genome locationscaffold36:1467201..1469167
RNA-Seq ExpressionMS001101
SyntenyMS001101
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001377 - Ribosomal protein S6e
IPR014401 - Ribosomal protein S6, eukaryotic
IPR018282 - Ribosomal protein S6e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065138.1 40S ribosomal protein S6-like [Cucumis melo var. makuwa]3.9e-12897.99Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVS DLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

XP_022131886.1 40S ribosomal protein S6 [Momordica charantia]7.1e-13099.2Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

XP_022948606.1 40S ribosomal protein S6 [Cucurbita moschata]5.1e-12897.59Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVS DLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPS+AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

XP_022951611.1 40S ribosomal protein S6-like [Cucurbita moschata]5.1e-12897.59Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVS DLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTK+GKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS ASKPS+AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

XP_022962357.1 40S ribosomal protein S6-like [Cucurbita moschata]2.3e-12897.99Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVS DLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPS+AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

TrEMBL top hitse value%identityAlignment
A0A5A7VBY0 40S ribosomal protein S61.9e-12897.99Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVS DLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

A0A6J1BQQ2 40S ribosomal protein S63.4e-13099.2Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

A0A6J1HCI6 40S ribosomal protein S61.1e-12897.99Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVS DLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPS+AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

A0A6J1ICI3 40S ribosomal protein S62.5e-12897.59Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVS DLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPS+AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

A0A6J1KKB1 40S ribosomal protein S62.5e-12897.59Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVS DLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTK+GKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS ASKPS+AA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

SwissProt top hitse value%identityAlignment
O48549 40S ribosomal protein S6-18.1e-12190Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSVAA
        K+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL SAA+KPSV A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSVAA

P29345 40S ribosomal protein S6 (Fragment)1.0e-8687.25Show/hide
Query:  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRK
        KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   
Subjt:  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRK

Query:  LFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKP
        L+   KEDDVRKYVNT    FTTK   K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAKSEAAEYQKLLASRLKEQRE+RSESLAKKRSRLSAASKP
Subjt:  LFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKP

Query:  SVAA
        S+AA
Subjt:  SVAA

P51430 40S ribosomal protein S6-29.6e-12290.76Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT K GKKVSKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS+A    VAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

P62753 40S ribosomal protein S61.6e-7665.15Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++ NI+ P TGCQK +E+DD++KLR F++KR++ EV+ D+LGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G  C+R   RR GER+RKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIV  +LSVLNLVIVKKG+ D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+    +  K  +KAPKIQRLVTP  LQ KR RIA KK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSA
        +R  K K EAAEY KLLA R+KE +E+R E +AK+R RLS+
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSA

Q9M3V8 40S ribosomal protein S63.5e-12494.24Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG+NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT K GK  SKAPKIQRLVTPLTLQRKR RIAEKK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAAS
        KR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKKRSRLSAA+
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAAS

Arabidopsis top hitse value%identityAlignment
AT4G31700.1 ribosomal protein S65.8e-12290Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSVAA
        K+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL SAA+KPSV A
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSVAA

AT4G31700.2 ribosomal protein S61.9e-8589.89Show/hide
Query:  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY
        MKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVSPDLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTY
Subjt:  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTY

Query:  RRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSVAA
        RR FT K GK+VSKAPKIQRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL SAA+KPSV A
Subjt:  RRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SAASKPSVAA

AT5G10360.1 Ribosomal protein S6e6.8e-12390.76Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKKG +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT K GKKVSKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS+A    VAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA

AT5G10360.2 Ribosomal protein S6e5.5e-8871.89Show/hide
Query:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR
        ++FN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVR
Subjt:  LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVR

Query:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK
        GCIVSPDLSVLNLVIVKK                                                    GKKVSKAPKIQRLVTPLTLQRKR RIA+KK
Subjt:  GCIVSPDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKK

Query:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA
        KRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS+A    VAA
Subjt:  KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSVAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGCAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGACCAGAAGCTCCGTGCTTTCTTTGACAAGAGGATCTCTCAGGAGGTCAG
TGGAGATTCCCTTGGAGAGGAATTCAAGGGCTACGTTTTCAAGATTATGGGAGGATGTGACAAGCAGGGATTCCCAATGAAACAGGGAGTTTTGACCCCTGGCCGTGTTC
GTCTCTTACTTCACAGAGGTACCCCTTGTTTCCGTGGTTATGGAAGGCGTAACGGTGAACGCAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCCAGACCTTTCTGTC
CTGAATCTGGTGATTGTGAAGAAGGGTGACAATGATCTTCCTGGTTTGACAGATACCGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATCCGCAAACTTTT
CAATCTCTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGAACATTCACCACCAAAGCTGGGAAAAAGGTTAGCAAAGCCCCCAAGATTCAGAGATTGG
TCACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCAAAGGCCAAGTCTGAGGCCGCCGAGTACCAGAAGCTGCTGGCCTCTAGG
TTGAAGGAGCAAAGAGAACGCCGTAGCGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCTAAGCCATCTGTTGCTGCT
mRNA sequenceShow/hide mRNA sequence
TTGCAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGACCAGAAGCTCCGTGCTTTCTTTGACAAGAGGATCTCTCAGGAGGTCAG
TGGAGATTCCCTTGGAGAGGAATTCAAGGGCTACGTTTTCAAGATTATGGGAGGATGTGACAAGCAGGGATTCCCAATGAAACAGGGAGTTTTGACCCCTGGCCGTGTTC
GTCTCTTACTTCACAGAGGTACCCCTTGTTTCCGTGGTTATGGAAGGCGTAACGGTGAACGCAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCCAGACCTTTCTGTC
CTGAATCTGGTGATTGTGAAGAAGGGTGACAATGATCTTCCTGGTTTGACAGATACCGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATCCGCAAACTTTT
CAATCTCTCAAAGGAGGATGATGTTCGAAAGTATGTTAACACATACCGTAGAACATTCACCACCAAAGCTGGGAAAAAGGTTAGCAAAGCCCCCAAGATTCAGAGATTGG
TCACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCAAAGGCCAAGTCTGAGGCCGCCGAGTACCAGAAGCTGCTGGCCTCTAGG
TTGAAGGAGCAAAGAGAACGCCGTAGCGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCTAAGCCATCTGTTGCTGCT
Protein sequenceShow/hide protein sequence
LQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSV
LNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASR
LKEQRERRSESLAKKRSRLSAASKPSVAA