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MS001108 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001108
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold36:1502837..1503328
RNA-Seq ExpressionMS001108
SyntenyMS001108
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598702.1 hypothetical protein SDJN03_08480, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1752.67Show/hide
Query:  MAKNLRKLKDHAAAAMARAR------KSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSS
        M KNL KLK H AAA A A+       S      RCRKHPKH+QSPGVCSLCLREKLS L  T      A + A S SSSSLSS+SS YSS+  +SS S 
Subjt:  MAKNLRKLKDHAAAAMARAR------KSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSS

Query:  PPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKE
         P   R K SI   SSLFKRRS      + +++   G WSKL++NRR K+
Subjt:  PPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKE

KAG7029644.1 hypothetical protein SDJN02_07984, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-1855.33Show/hide
Query:  MAKNLRKLKDHAAAAMARA--RKSSIGGG----GRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSS
        M KNLRKLK H AAA A A  RK + G G     RCRKHPKH+QSPGVCSLCLREKLS L  T      A + A S SSSSLSS+SS YSS+  +SS S 
Subjt:  MAKNLRKLKDHAAAAMARA--RKSSIGGG----GRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSS

Query:  PPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKE
         P   R K SI   SSLFKRRS      + +++   G WSKL++NRR K+
Subjt:  PPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKE

XP_008444863.1 PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo]2.3e-2051.12Show/hide
Query:  KLKDHAAAAMARARKSS---IGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNT---DYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR
        KLK HAAA MAR+        GG  +CRKHPKH+QSPGVCS+CLREKL  L  T       S++ KI  S SSSSLSS+SS YSS+S +S  SS P    
Subjt:  KLKDHAAAAMARARKSS---IGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNT---DYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR

Query:  RKRSISGMSSLFKRRSSANNLLSSS----------------RSLADGLWSKLVVNRRGK----EQTLR-RSASTTTDH
        +K SIS MSSL  +R  +++L SSS                +S  DG WSKL++NRRGK    E TLR  S STTTDH
Subjt:  RKRSISGMSSLFKRRSSANNLLSSS----------------RSLADGLWSKLVVNRRGK----EQTLR-RSASTTTDH

XP_022131967.1 uncharacterized protein LOC111004952 [Momordica charantia]8.3e-79100Show/hide
Query:  MAKNLRKLKDHAAAAMARARKSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR
        MAKNLRKLKDHAAAAMARARKSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR
Subjt:  MAKNLRKLKDHAAAAMARARKSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR

Query:  RKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKEQTLRRSASTTTDHHHHHIVA
        RKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKEQTLRRSASTTTDHHHHHIVA
Subjt:  RKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKEQTLRRSASTTTDHHHHHIVA

XP_031736533.1 uncharacterized serine-rich protein C215.13-like [Cucumis sativus]1.4e-1747.69Show/hide
Query:  MAKNLRKLKDHAAAAMARARKSS--------IGGG---GRCRKHPKHQQSPGVCSLCLREKLSQL-LNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASS
        M KN   LK HAAA MAR+            +GGG     CRKHPKH+QSPGVCS+CLREKL  L +      S++ KI  S SSSSLSS+SS YSS+S 
Subjt:  MAKNLRKLKDHAAAAMARARKSS--------IGGG---GRCRKHPKHQQSPGVCSLCLREKLSQL-LNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASS

Query:  ASSCSSPPTIIRRKRSISGMSS-LFKRRSSANNLLSSSR-------SLAD------------GLWSKLVVNRRGKE-----QTLR-RSASTTTDH
        +S  SS P    +K S+S MSS LFKRR S+++  S++        + AD            G WSKL++NRRGKE      TLR  S STTTDH
Subjt:  ASSCSSPPTIIRRKRSISGMSS-LFKRRSSANNLLSSSR-------SLAD------------GLWSKLVVNRRGKE-----QTLR-RSASTTTDH

TrEMBL top hitse value%identityAlignment
A0A0A0LPJ0 Uncharacterized protein6.8e-1847.69Show/hide
Query:  MAKNLRKLKDHAAAAMARARKSS--------IGGG---GRCRKHPKHQQSPGVCSLCLREKLSQL-LNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASS
        M KN   LK HAAA MAR+            +GGG     CRKHPKH+QSPGVCS+CLREKL  L +      S++ KI  S SSSSLSS+SS YSS+S 
Subjt:  MAKNLRKLKDHAAAAMARARKSS--------IGGG---GRCRKHPKHQQSPGVCSLCLREKLSQL-LNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASS

Query:  ASSCSSPPTIIRRKRSISGMSS-LFKRRSSANNLLSSSR-------SLAD------------GLWSKLVVNRRGKE-----QTLR-RSASTTTDH
        +S  SS P    +K S+S MSS LFKRR S+++  S++        + AD            G WSKL++NRRGKE      TLR  S STTTDH
Subjt:  ASSCSSPPTIIRRKRSISGMSS-LFKRRSSANNLLSSSR-------SLAD------------GLWSKLVVNRRGKE-----QTLR-RSASTTTDH

A0A1S3BC83 uncharacterized serine-rich protein C215.13-like1.1e-2051.12Show/hide
Query:  KLKDHAAAAMARARKSS---IGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNT---DYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR
        KLK HAAA MAR+        GG  +CRKHPKH+QSPGVCS+CLREKL  L  T       S++ KI  S SSSSLSS+SS YSS+S +S  SS P    
Subjt:  KLKDHAAAAMARARKSS---IGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNT---DYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR

Query:  RKRSISGMSSLFKRRSSANNLLSSS----------------RSLADGLWSKLVVNRRGK----EQTLR-RSASTTTDH
        +K SIS MSSL  +R  +++L SSS                +S  DG WSKL++NRRGK    E TLR  S STTTDH
Subjt:  RKRSISGMSSLFKRRSSANNLLSSS----------------RSLADGLWSKLVVNRRGK----EQTLR-RSASTTTDH

A0A438FZN9 Uncharacterized protein1.6e-1149.19Show/hide
Query:  CRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLA
        CRKHPKH+QSPGVCS+CLRE+LSQL  +    ST   +A + SSSSLSS SS YSS S ASSCSSP   ++R R  S     F    S  N+L+ SRS+A
Subjt:  CRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLA

Query:  ----------------DGLWSKLV
                         G WSKL+
Subjt:  ----------------DGLWSKLV

A0A6J1BSJ2 uncharacterized protein LOC1110049524.0e-79100Show/hide
Query:  MAKNLRKLKDHAAAAMARARKSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR
        MAKNLRKLKDHAAAAMARARKSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR
Subjt:  MAKNLRKLKDHAAAAMARARKSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIR

Query:  RKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKEQTLRRSASTTTDHHHHHIVA
        RKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKEQTLRRSASTTTDHHHHHIVA
Subjt:  RKRSISGMSSLFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKEQTLRRSASTTTDHHHHHIVA

I1MAW7 Uncharacterized protein2.1e-1167.65Show/hide
Query:  GRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSP
        G C+KHPKH QSPGVCSLCLREKLSQL ++           CS SSSSLSS SSCYSSAS++SSC+SP
Subjt:  GRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22470.1 unknown protein6.3e-0838.84Show/hide
Query:  CRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLA
        C+KHPKH+QSPG+CSLCL E LS+L +  Y  S+      S SSSSL+   S  SSASS S      T I                SS  + +SS  S  
Subjt:  CRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLA

Query:  DGLWSKLVVNRRGKEQTLRRS
           +S++VVN++ K+   ++S
Subjt:  DGLWSKLVVNRRGKEQTLRRS

AT1G35210.1 unknown protein1.8e-0740.5Show/hide
Query:  CRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLA
        C+KHPKH+QSPGVCSLCL E+LS  +          +   S SSS+ SS+SS    +SS SSC SP    RR   +SG S    R     + ++ SRS+A
Subjt:  CRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLFKRRSSANNLLSSSRSLA

Query:  DGLWSKLVVNRRGKEQTLRRS
             K+   +R K++T   S
Subjt:  DGLWSKLVVNRRGKEQTLRRS

AT1G72240.1 unknown protein5.1e-1050Show/hide
Query:  CRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIAC-----SGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLF
        C+KH KH+QSPG+CSLCL E+LS+ L+ +Y+  T   +       S S+SS SSVSSCYSS SS SSCSSP     R++   G    F
Subjt:  CRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIAC-----SGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGAATTTGAGGAAACTAAAGGACCATGCGGCGGCGGCAATGGCAAGGGCAAGGAAATCCAGCATCGGCGGCGGTGGTCGGTGCCGGAAGCACCCAAAACACCA
GCAGTCGCCAGGAGTGTGCTCGCTATGTCTGAGAGAAAAGCTGTCTCAATTGTTGAATACAGACTATCATGGCTCCACTGCGCCTAAAATAGCATGTTCAGGCTCCTCTT
CTTCGTTGTCTTCTGTATCGTCTTGTTATTCTTCAGCATCGTCGGCTTCTTCGTGCTCTTCTCCACCTACCATAATTAGAAGAAAGAGGTCGATTTCGGGCATGTCCAGC
TTGTTCAAGAGAAGATCAAGTGCTAATAATTTGTTGAGTAGCAGTAGATCTCTGGCTGATGGGTTGTGGTCCAAGTTGGTGGTGAATCGGAGAGGGAAGGAACAAACTTT
GAGGCGTTCGGCTTCTACTACAACAGATCATCATCATCATCACATAGTTGCT
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGAATTTGAGGAAACTAAAGGACCATGCGGCGGCGGCAATGGCAAGGGCAAGGAAATCCAGCATCGGCGGCGGTGGTCGGTGCCGGAAGCACCCAAAACACCA
GCAGTCGCCAGGAGTGTGCTCGCTATGTCTGAGAGAAAAGCTGTCTCAATTGTTGAATACAGACTATCATGGCTCCACTGCGCCTAAAATAGCATGTTCAGGCTCCTCTT
CTTCGTTGTCTTCTGTATCGTCTTGTTATTCTTCAGCATCGTCGGCTTCTTCGTGCTCTTCTCCACCTACCATAATTAGAAGAAAGAGGTCGATTTCGGGCATGTCCAGC
TTGTTCAAGAGAAGATCAAGTGCTAATAATTTGTTGAGTAGCAGTAGATCTCTGGCTGATGGGTTGTGGTCCAAGTTGGTGGTGAATCGGAGAGGGAAGGAACAAACTTT
GAGGCGTTCGGCTTCTACTACAACAGATCATCATCATCATCACATAGTTGCT
Protein sequenceShow/hide protein sequence
MAKNLRKLKDHAAAAMARARKSSIGGGGRCRKHPKHQQSPGVCSLCLREKLSQLLNTDYHGSTAPKIACSGSSSSLSSVSSCYSSASSASSCSSPPTIIRRKRSISGMSS
LFKRRSSANNLLSSSRSLADGLWSKLVVNRRGKEQTLRRSASTTTDHHHHHIVA