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MS001111 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001111
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold36:1512627..1513156
RNA-Seq ExpressionMS001111
SyntenyMS001111
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132223.1 uncharacterized protein LOC111005138 [Momordica charantia]2.7e-5595.8Show/hide
Query:  MAIYSGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVEN
        MAIYSGEGLGFP LPDLPRQVPWPLWMLGMLISAILPF GNKLWPFLIL QNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALF+EN
Subjt:  MAIYSGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVEN

Query:  AAKTLSKDAHVAEQIVHKV
        AAKTLSKDAHVAEQIVHK+
Subjt:  AAKTLSKDAHVAEQIVHKV

XP_023546969.1 uncharacterized protein LOC111805911 [Cucurbita pepo subsp. pepo]3.9e-2556.45Show/hide
Query:  MAIYS-GEGLG--FPPLPDLPRQVPWPLWMLGMLISAILPFW-GNKLW-PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAA
        MA+Y  G GLG   PP P  P   PWPLW+ G ++SAIL  W   K W PFL+LKQ V+KVV   E+V +MVETAAE V+KVAEE+A+HLP+   LQK A
Subjt:  MAIYS-GEGLG--FPPLPDLPRQVPWPLWMLGMLISAILPFW-GNKLW-PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAA

Query:  LFVENAAKTLSKDAHVAEQIVHKV
        + VENAA+T++KDA++A +I+ KV
Subjt:  LFVENAAKTLSKDAHVAEQIVHKV

XP_038886505.1 uncharacterized protein LOC120076681 isoform X1 [Benincasa hispida]2.1e-3164.75Show/hide
Query:  MAIY-SGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLW--PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALF
        MAIY SG+  G PPLP LP   PWPLW+ G+L+SA+L  W  K +  PFL LK+ VDKVVD VEEVAEMVETAAE V+KVAEE+AEHLP+G +LQKAALF
Subjt:  MAIY-SGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLW--PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALF

Query:  VENAAKTLSKDAHVAEQIVHKV
        VENAA+ ++KDA +A  I+ K+
Subjt:  VENAAKTLSKDAHVAEQIVHKV

XP_038886506.1 uncharacterized protein LOC120076681 isoform X2 [Benincasa hispida]2.8e-3165.29Show/hide
Query:  MAIY-SGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLW--PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALF
        MAIY SG+  G PPLP LP   PWPLW+ G+L+SA+L  W  K +  PFL LK+ VDKVVD VEEVAEMVETAAE V+KVAEE+AEHLP+G +LQKAALF
Subjt:  MAIY-SGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLW--PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALF

Query:  VENAAKTLSKDAHVAEQIVHK
        VENAA+ ++KDA +A  I+ K
Subjt:  VENAAKTLSKDAHVAEQIVHK

XP_038886507.1 uncharacterized protein LOC120076681 isoform X3 [Benincasa hispida]9.5e-3265.57Show/hide
Query:  MAIY-SGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLW--PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALF
        MAIY SG+  G PPLP LP   PWPLW+ G+L+SA+L  W  K +  PFL LK+ VDKVVD VEEVAEMVETAAE V+KVAEE+AEHLP+G +LQKAALF
Subjt:  MAIY-SGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLW--PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALF

Query:  VENAAKTLSKDAHVAEQIVHKV
        VENAA+ ++KDA +A  I+ KV
Subjt:  VENAAKTLSKDAHVAEQIVHKV

TrEMBL top hitse value%identityAlignment
A0A067LA97 Uncharacterized protein7.8e-2450.85Show/hide
Query:  MAIYSGEGLGFPPLPDLPRQVP--WPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFV
        M +Y+G   G P LP  P   P  W +W+LGMLI+ +LP W NK WP L LK  V+ VV+  E+V ++VE  AE +EKVAEEVA+HLP+GG+L+ A   V
Subjt:  MAIYSGEGLGFPPLPDLPRQVP--WPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFV

Query:  ENAAKTLSKDAHVAEQIV
        EN AK  +KDAH+  Q++
Subjt:  ENAAKTLSKDAHVAEQIV

A0A6A6LE81 Uncharacterized protein2.1e-2453.7Show/hide
Query:  PPLPDLPRQVPWPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVENAAKTLSKDAHV
        P LP  P    W +W+LGM+I+ I+PFW NK WP L LK  V+ VV+  E V E+VE  AE VEKV+EEVA+HLP+GG+L+++  FVEN AK  +KDAH+
Subjt:  PPLPDLPRQVPWPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVENAAKTLSKDAHV

Query:  AEQIVHKV
        A +++ KV
Subjt:  AEQIVHKV

A0A6J1BVN6 uncharacterized protein LOC1110051381.3e-5595.8Show/hide
Query:  MAIYSGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVEN
        MAIYSGEGLGFP LPDLPRQVPWPLWMLGMLISAILPF GNKLWPFLIL QNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALF+EN
Subjt:  MAIYSGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVEN

Query:  AAKTLSKDAHVAEQIVHKV
        AAKTLSKDAHVAEQIVHK+
Subjt:  AAKTLSKDAHVAEQIVHKV

A0A6J1HCK6 uncharacterized protein LOC1114627542.7e-2456.45Show/hide
Query:  MAIYS-GEGLGFP-PLPDLPRQV-PWPLWMLGMLISAILPFW-GNKLW-PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAA
        MA+Y  G GLG P PLP  P  + PWPLW+ G ++SAIL  W   K W PFL+LKQ V+KVV   E+V +MVETAAE V+KVAEE+A+HLP+   LQK A
Subjt:  MAIYS-GEGLGFP-PLPDLPRQV-PWPLWMLGMLISAILPFW-GNKLW-PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAA

Query:  LFVENAAKTLSKDAHVAEQIVHKV
        + VEN A+T++KDA++A  I+ KV
Subjt:  LFVENAAKTLSKDAHVAEQIVHKV

A0A6J1K717 uncharacterized protein LOC1114922238.7e-2350.39Show/hide
Query:  MAIYSGEGLG------FPPLPDLPRQVPWPLWMLGMLISAILPFW-GNKLW-PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQ
        MA+Y G G G       P  P  P   PWPLW+ G ++SAIL  W   K W PFL+LKQ V+KVV   E+V +MVETAA+ V+KV+EE+ +HLP+   LQ
Subjt:  MAIYSGEGLG------FPPLPDLPRQVPWPLWMLGMLISAILPFW-GNKLW-PFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQ

Query:  KAALFVENAAKTLSKDAHVAEQIVHKV
        K A+ VEN A+T++KDA++A +I+ KV
Subjt:  KAALFVENAAKTLSKDAHVAEQIVHKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G14095.1 unknown protein1.0e-1237.76Show/hide
Query:  WPLWMLGMLISAILPFWGN-KLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVENAAKTLSKDAHVAEQIVHKV
        W  W++G  IS +L FW N +L     ++   + VV+ VE VAEMVE  A   +++AEE+AE LP+  +L++ AL +E+ ++  + +AH+ +  +HKV
Subjt:  WPLWMLGMLISAILPFWGN-KLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVENAAKTLSKDAHVAEQIVHKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTTACAGCGGCGAAGGCCTTGGATTTCCACCTCTTCCTGATCTTCCTCGTCAGGTTCCTTGGCCCTTGTGGATGCTTGGGATGCTAATATCCGCAATTTTACC
GTTTTGGGGTAATAAATTGTGGCCTTTTCTGATATTAAAGCAGAACGTAGACAAAGTGGTGGATGCGGTGGAGGAAGTGGCAGAAATGGTGGAGACGGCGGCGGAGGGAG
TGGAGAAGGTGGCGGAAGAGGTCGCCGAACATCTCCCACAAGGCGGCCAACTCCAGAAAGCTGCACTTTTCGTGGAAAATGCAGCCAAAACCCTTTCCAAGGACGCCCAT
GTTGCAGAACAAATCGTCCACAAGGTC
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTTACAGCGGCGAAGGCCTTGGATTTCCACCTCTTCCTGATCTTCCTCGTCAGGTTCCTTGGCCCTTGTGGATGCTTGGGATGCTAATATCCGCAATTTTACC
GTTTTGGGGTAATAAATTGTGGCCTTTTCTGATATTAAAGCAGAACGTAGACAAAGTGGTGGATGCGGTGGAGGAAGTGGCAGAAATGGTGGAGACGGCGGCGGAGGGAG
TGGAGAAGGTGGCGGAAGAGGTCGCCGAACATCTCCCACAAGGCGGCCAACTCCAGAAAGCTGCACTTTTCGTGGAAAATGCAGCCAAAACCCTTTCCAAGGACGCCCAT
GTTGCAGAACAAATCGTCCACAAGGTC
Protein sequenceShow/hide protein sequence
MAIYSGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVENAAKTLSKDAH
VAEQIVHKV