; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001126 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001126
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZF-HD dimerization-type domain-containing protein
Genome locationscaffold36:1630665..1631414
RNA-Seq ExpressionMS001126
SyntenyMS001126
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006455 - Homeodomain, ZF-HD class
IPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain
IPR009057 - Homeobox-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065114.1 zinc-finger homeodomain protein 2 [Cucumis melo var. makuwa]1.8e-8067.57Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAAGT-----NFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHR
        MEF+EE+   D+EIM++    +HH  +  ++ S   KP   A T     + RYRECLKNHAIGIGGHAVDGCGEFMPAGE+GSIDALKCAACNCHRNFHR
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAAGT-----NFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHR

Query:  KETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP---PPSYVYLAGAPFQQRPLALPAASGGGEE-DASNPSSSGGGGGGGGGGGGSKKRFR
        KETDSDQG             YYY        QQ    YRGP   P +YVY+ GAP QQR LALPAA+GG EE D SNPSSSGGGGGG G G   KKRFR
Subjt:  KETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP---PPSYVYLAGAPFQQRPLALPAASGGGEE-DASNPSSSGGGGGGGGGGGGSKKRFR

Query:  TKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP
        TKFS+EQKEKML FAE+VGWTIQKHDEADVERFC ETGVRRQVLKVWMHNNKHTLG KP
Subjt:  TKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP

KAG6598718.1 Zinc-finger homeodomain protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-8066.29Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAA--------------GTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAA
        M+F+EEH+DQDDE++E+  PI+HH   +D+T  P  +  S A              G N RY+ECLKNHAIGIGG AVDGCGEF+PAGE+GSIDALKCAA
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAA--------------GTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAA

Query:  CNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGG
        CNCHRNFHRKETDSDQG                H+ + H H Q   SYRGP  P +YVYL GAP QQRPLALPAA  G EE+   SNPSSS GGGGGGGG
Subjt:  CNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGG

Query:  GGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
         G  KKRFRTKFS EQKEKML FAE+VGWTIQKHDEADVE FCR TGVRRQVLKVWMHNNKHTLG K
Subjt:  GGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

KAG7029658.1 Zinc-finger homeodomain protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-8066.17Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAA-------------GTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAAC
        M+F+EEH+DQDDE++E+  PI+HH   +D+T  P  +  S A             G N RY+ECLKNHAIGIGG AVDGCGEF+PAGE+GSIDALKCAAC
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAA-------------GTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAAC

Query:  NCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGGG
        NCHRNFHRKETDSDQG                H+ + H H Q   SYRGP  P +YVYL GAP QQRPLALPAA  G EE+   SNPSSS  GGGGGGG 
Subjt:  NCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGGG

Query:  GGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
        G  KKRFRTKFS EQKEKML FAE+VGWTIQKHDEADVE FCR TGVRRQVLKVWMHNNKHTLG K
Subjt:  GGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

XP_022997252.1 zinc-finger homeodomain protein 2-like [Cucurbita maxima]4.0e-8066.29Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSA-----------AGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNC
        M+F+EEH+DQDDE++E+  PI+HH   +D+TP P  +  SA            G N RY+ECLKNHAIGIGG AVDGCGEF+PAGE+GSIDALKCAACNC
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSA-----------AGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNC

Query:  HRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGGGGG
        HRNFHRKETDSDQG                H+ + H H Q   SYRGP  P +YVYL GAP QQRPLALPAA  G EE+   SNPSSS   GGG GG G 
Subjt:  HRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGGGGG

Query:  SKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
         KKRFRTKFS EQKEKML FAE+VGWTIQKHDEADVE FCR TGVRRQVLKVWMHNNKHTLG K
Subjt:  SKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

XP_038885559.1 zinc-finger homeodomain protein 2 [Benincasa hispida]2.3e-8067.16Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPP---------------SAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCA
        MEF+EE+   DDEIME+    +HH   YDS  + A   P               S+ G+N RYRECLKNHAIGIGGHAVDGCGEFMPAGE+GSIDALKCA
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPP---------------SAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCA

Query:  ACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLS-SSYRGP---PPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGGGGGG
        ACNCHRNFHRKETDSDQG             YYY        QQL   SYRGP   P +YVYL GAP Q R LAL AA G  E+D SNPSSSGGGGGGGG
Subjt:  ACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLS-SSYRGP---PPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGGGGGG

Query:  GGGGS--KKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP
        G G    KKRFRTKFS EQKEKMLGFAE+VGWTIQKHDEADVERFC ETGVRRQVLKVWMHNNKHTLG KP
Subjt:  GGGGS--KKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP

TrEMBL top hitse value%identityAlignment
A0A059BKP6 ZF-HD dimerization-type domain-containing protein1.6e-7459.86Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHS-----LTYDSTPSPAR--------------KPPSAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDA
        MEF +EH+DQD+E+     P+ HH      + YDS  +P R               P  +A  + RYRECLKNHA+GIGG AVDGCGEFM AGE+G++DA
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHS-----LTYDSTPSPAR--------------KPPSAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDA

Query:  LKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHP---HQQLSSSYRG--PPPSYVYLAGAPFQQRPLALPAASGGGE-----EDASNPS
        LKCAACNCHRNFHRKETD+  G         GG    YHHPH HP   H Q S  YR    P  Y++L     Q RPLALPAASGGG      ED SNPS
Subjt:  LKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHP---HQQLSSSYRG--PPPSYVYLAGAPFQQRPLALPAASGGGE-----EDASNPS

Query:  SSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP
        SS  GGGGGGGG G KKRFRTKF+ EQKEKMLGFAER+GW IQKHDE  VE+FC ETGV+R VLKVWMHNNKHTLG KP
Subjt:  SSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP

A0A0A0LRT7 ZF-HD dimerization-type domain-containing protein1.4e-7865.89Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAAGT-----NFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHR
        MEF+EE+   D+EIM++    +HH  +  ++ S   KP   A T     + RYRECLKNHAIGIGGHAVDGCGEFMPAGE+GSIDALKCAACNCHRNFHR
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAAGT-----NFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHR

Query:  KETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP---PPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGGGGGGGGGGSKKRFRT
        KETDSDQG             YYY        QQ    YRGP   P +YVY+ GAP QQR LALPAA+GG EED ++  SS GGGGG G G   KKRFRT
Subjt:  KETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP---PPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGGGGGGGGGGSKKRFRT

Query:  KFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP
        KFS+EQKEKML FAE+VGWTIQKHDEADVERFC ETGVRRQVLKVWMHNNKHTLG KP
Subjt:  KFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP

A0A5A7VCV2 Zinc-finger homeodomain protein 28.6e-8167.57Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAAGT-----NFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHR
        MEF+EE+   D+EIM++    +HH  +  ++ S   KP   A T     + RYRECLKNHAIGIGGHAVDGCGEFMPAGE+GSIDALKCAACNCHRNFHR
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAAGT-----NFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHR

Query:  KETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP---PPSYVYLAGAPFQQRPLALPAASGGGEE-DASNPSSSGGGGGGGGGGGGSKKRFR
        KETDSDQG             YYY        QQ    YRGP   P +YVY+ GAP QQR LALPAA+GG EE D SNPSSSGGGGGG G G   KKRFR
Subjt:  KETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP---PPSYVYLAGAPFQQRPLALPAASGGGEE-DASNPSSSGGGGGGGGGGGGSKKRFR

Query:  TKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP
        TKFS+EQKEKML FAE+VGWTIQKHDEADVERFC ETGVRRQVLKVWMHNNKHTLG KP
Subjt:  TKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP

A0A6J1HCR6 zinc-finger homeodomain protein 2-like7.3e-8066.03Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSA---------AGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHR
        M+F+EEH+DQDDE++E+  PI+HH   +D+TP P  +  SA          G N RY+ECLKNHAIGIGG AVDGCGEF+PAGE+GSIDALKCAACNCHR
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSA---------AGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHR

Query:  NFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGGGGGSK
        NFHRKETDSDQG                H+ + H H Q   SYRGP  P +YVYL GAP QQRPLALPAA  G EE+   SNPSSS      GGG G  K
Subjt:  NFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGGGGGSK

Query:  KRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
        KRFRTKFS EQKEKML FAE+VGWTIQKHDEADVE FCR TGVRRQVLKVWMHNNKHTLG K
Subjt:  KRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

A0A6J1K4H7 zinc-finger homeodomain protein 2-like1.9e-8066.29Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSA-----------AGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNC
        M+F+EEH+DQDDE++E+  PI+HH   +D+TP P  +  SA            G N RY+ECLKNHAIGIGG AVDGCGEF+PAGE+GSIDALKCAACNC
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSA-----------AGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNC

Query:  HRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGGGGG
        HRNFHRKETDSDQG                H+ + H H Q   SYRGP  P +YVYL GAP QQRPLALPAA  G EE+   SNPSSS   GGG GG G 
Subjt:  HRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGP--PPSYVYLAGAPFQQRPLALPAASGGGEED--ASNPSSSGGGGGGGGGGGG

Query:  SKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
         KKRFRTKFS EQKEKML FAE+VGWTIQKHDEADVE FCR TGVRRQVLKVWMHNNKHTLG K
Subjt:  SKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

SwissProt top hitse value%identityAlignment
A2YWA6 Zinc-finger homeodomain protein 21.0e-5452.56Show/hide
Query:  GTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGPPPSYV
        G   RYRECLKNHA+GIGGHAVDGCGEFM +GE+GSIDAL+CAAC CHRNFHRKE++S  GVG      V   +   +     PH Q S  YR  P  Y+
Subjt:  GTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGPPPSYV

Query:  Y---------------LAGAPFQQRPLALPAASGGGEEDASNPSSSGG------------GGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQK
        +                A   + QRPLALP+ S  G ++  + S   G            G  G  G G  KKRFRTKF+ EQK+KML FAER+GW IQK
Subjt:  Y---------------LAGAPFQQRPLALPAASGGGEEDASNPSSSGG------------GGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQK

Query:  HDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
        HDEA V++FC E  V+R VLKVWMHNNKHTLG K
Subjt:  HDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

A2Z259 Zinc-finger homeodomain protein 11.6e-5549.13Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTP-------SPARKPPSAAGTNF--------RYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCA
        M+F ++H+D D+E+     P    S +Y++ P         A KPP   G++         RYRECLKNHA+GIGGHAVDGCGEFM AGE+G+IDAL+CA
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTP-------SPARKPPSAAGTNF--------RYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCA

Query:  ACNCHRNFHRKETDSDQGVG--------VGGGVGVGGQ-SYYYHHP----HPHPHQQLSSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEED------
        ACNCHRNFHRKE++S  G G        V  G     Q S YY  P    H H H   +++      +    A     QRPLALP+ S  G +D      
Subjt:  ACNCHRNFHRKETDSDQGVG--------VGGGVGVGGQ-SYYYHHP----HPHPHQQLSSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEED------

Query:  ------ASNPSSSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
              A  P S    G G  G G  KKRFRTKF+ EQK+KML FAERVGW IQKHDEA V++FC E GV+R VLKVWMHNNKHTLG K
Subjt:  ------ASNPSSSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

Q6YXH5 Zinc-finger homeodomain protein 17.0e-5649.13Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTP-------SPARKPPSAAGTNF--------RYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCA
        M+F ++H+D D+E+     P    S +Y++ P         A KPP   G+          RYRECLKNHA+GIGGHAVDGCGEFM AGE+G+IDAL+CA
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTP-------SPARKPPSAAGTNF--------RYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCA

Query:  ACNCHRNFHRKETDSDQGVG--------VGGGVGVGGQ-SYYYHHP----HPHPHQQLSSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEED------
        ACNCHRNFHRKE++S  G G        V  G     Q S YY  P    H H H   +++      +    A   + QRPLALP+ S  G +D      
Subjt:  ACNCHRNFHRKETDSDQGVG--------VGGGVGVGGQ-SYYYHHP----HPHPHQQLSSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEED------

Query:  ------ASNPSSSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
              A  P S    G G  G G  KKRFRTKF+ EQK+KML FAERVGW IQKHDEA V++FC E GV+R VLKVWMHNNKHTLG K
Subjt:  ------ASNPSSSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

Q6ZB90 Zinc-finger homeodomain protein 21.0e-5452.56Show/hide
Query:  GTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGPPPSYV
        G   RYRECLKNHA+GIGGHAVDGCGEFM +GE+GSIDAL+CAAC CHRNFHRKE++S  GVG      V   +   +     PH Q S  YR  P  Y+
Subjt:  GTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGPPPSYV

Query:  Y---------------LAGAPFQQRPLALPAASGGGEEDASNPSSSGG------------GGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQK
        +                A   + QRPLALP+ S  G ++  + S   G            G  G  G G  KKRFRTKF+ EQK+KML FAER+GW IQK
Subjt:  Y---------------LAGAPFQQRPLALPAASGGGEEDASNPSSSGG------------GGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQK

Query:  HDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
        HDEA V++FC E  V+R VLKVWMHNNKHTLG K
Subjt:  HDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

Q9SB61 Zinc-finger homeodomain protein 21.9e-6153.7Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPAR---KPPSAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKE
        M FE++ ED   E+     P  + SL+ +   S            G   RYRECLKNHA+ IGGHAVDGC EFMP+GEDG++DALKCAAC CHRNFHRKE
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPAR---KPPSAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKE

Query:  TDSDQGVGVGGGVGVGGQSY----YYHHPHPHPHQQLSSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGGGGGGGGGGSKKRFRTK
        T+S           +GG+++    YY+ P P PHQ         PP Y++L       RP   PAAS G EED SNPSSS          GG+ KRFRTK
Subjt:  TDSDQGVGVGGGVGVGGQSY----YYHHPHPHPHQQLSSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGGGGGGGGGGSKKRFRTK

Query:  FSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP
        F+AEQKEKML FAER+GW IQKHD+  VE+FC ETGVRRQVLK+WMHNNK++LG KP
Subjt:  FSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP

Arabidopsis top hitse value%identityAlignment
AT1G14440.1 homeobox protein 312.8e-3946.7Show/hide
Query:  RYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGPPPSYVYLAG
        +Y+ECLKNHA  +GG+A DGCGEFMP+GEDGSI+AL C+ACNCHRNFHRKE        V G +     S Y+ HP   PH++L  +++    +  +   
Subjt:  RYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGPPPSYVYLAG

Query:  APFQQRPLALPAASGGGEEDASNPSSSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNK
         P           +   E+       +             KKRFRTKF+ EQKEKML FAE+VGW IQ+ ++  V+RFC E GV+R+VLKVWMHNNK
Subjt:  APFQQRPLALPAASGGGEEDASNPSSSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNK

AT1G75240.1 homeobox protein 333.4e-4542.64Show/hide
Query:  DTTPISHHSLTYD--STPSPARKPPSAAG-TNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVG
        + T +S +S T D   + SP+    SAA     RYRECLKNHA  +GG   DGCGEFMP+GE+G+I+AL+CAAC+CHRNFHRKE D   GVG    +   
Subjt:  DTTPISHHSLTYD--STPSPARKPPSAAG-TNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVG

Query:  GQSYYYHHPH--------PHPHQQLSSSYRGPPPSYVYL---------AGAPFQQRPLALPAASGGGEEDASNP------SSSGGGGGGGGGG-----GG
           +Y+H+ +        P P+  L+     PPP+Y  +          G      P+++    GGG  ++S+        SSG G G   G        
Subjt:  GQSYYYHHPH--------PHPHQQLSSSYRGPPPSYVYL---------AGAPFQQRPLALPAASGGGEEDASNP------SSSGGGGGGGGGG-----GG

Query:  SKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP
        SKKRFRTKF+ +QKE+M+ FAE++GW + K DE +++RFC E GV+RQV KVWMHNNK+     P
Subjt:  SKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP

AT2G02540.1 homeobox protein 212.9e-4140.91Show/hide
Query:  HHSLTYDSTPSPARKPPSAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHP
        HH + Y+   +  +K         +Y+ECLKNHA  +GG+A+DGCGEFMP+GE+GSI+AL C+ CNCHRNFHR+ET+ ++             S Y +H 
Subjt:  HHSLTYDSTPSPARKPPSAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHP

Query:  HPHPHQQL----SSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGG-----------GGGGGGGGSKKRFRTKFSAEQKEKMLGFAE
         P P Q+         + P P          QQ  + +   + G   ++ +     GGG                G   KKRFRTKF+ EQKEKM+ FAE
Subjt:  HPHPHQQL----SSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGG-----------GGGGGGGGSKKRFRTKFSAEQKEKMLGFAE

Query:  RVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK
        RVGW IQ+ +E+ V++ C+E G+RR+VLKVWMHNNK  L  K
Subjt:  RVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTK

AT4G24660.1 homeobox protein 221.4e-6253.7Show/hide
Query:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPAR---KPPSAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKE
        M FE++ ED   E+     P  + SL+ +   S            G   RYRECLKNHA+ IGGHAVDGC EFMP+GEDG++DALKCAAC CHRNFHRKE
Subjt:  MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPAR---KPPSAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKE

Query:  TDSDQGVGVGGGVGVGGQSY----YYHHPHPHPHQQLSSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGGGGGGGGGGSKKRFRTK
        T+S           +GG+++    YY+ P P PHQ         PP Y++L       RP   PAAS G EED SNPSSS          GG+ KRFRTK
Subjt:  TDSDQGVGVGGGVGVGGQSY----YYHHPHPHPHQQLSSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGGGGGGGGGGSKKRFRTK

Query:  FSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP
        F+AEQKEKML FAER+GW IQKHD+  VE+FC ETGVRRQVLK+WMHNNK++LG KP
Subjt:  FSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP

AT5G65410.1 homeobox protein 254.1e-5144.41Show/hide
Query:  MEFEEEHEDQDDEIMEDTT---PISHHSLTYDSTPSPARKPPSA------------------------AGTNFRYRECLKNHAIGIGGHAVDGCGEFMPA
        MEFE+ + + D+E  ED             YDS P     P ++                         G+ FR+RECLKN A+ IGGHAVDGCGEFMPA
Subjt:  MEFEEEHEDQDDEIMEDTT---PISHHSLTYDSTPSPARKPPSA------------------------AGTNFRYRECLKNHAIGIGGHAVDGCGEFMPA

Query:  GEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGPPPSYVYLAGAPFQQRP---------LALPAASGGGE
        G +G+IDALKCAAC CHRNFHRKE                    Y+HH  P  HQ        PPP   Y   AP   RP         LALP       
Subjt:  GEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGVGVGGQSYYYHHPHPHPHQQLSSSYRGPPPSYVYLAGAPFQQRP---------LALPAASGGGE

Query:  EDASNPSSSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP
        ED    SS+         GGG +KR RTKF+AEQKE+ML  AER+GW IQ+ D+  ++RFC+ETGV RQVLKVW+HNNKHTLG  P
Subjt:  EDASNPSSSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEADVERFCRETGVRRQVLKVWMHNNKHTLGTKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCGAGGAGGAGCACGAAGACCAAGACGACGAAATAATGGAGGACACAACGCCCATCTCCCACCACTCTCTCACCTACGACTCCACCCCGTCGCCGGCCAGAAA
GCCCCCCTCCGCCGCCGGAACAAATTTCCGGTACAGAGAGTGCCTGAAGAATCACGCCATCGGAATAGGCGGCCACGCCGTCGACGGCTGCGGCGAGTTCATGCCCGCCG
GAGAGGACGGCTCCATAGACGCACTCAAATGCGCCGCCTGTAACTGCCACCGGAATTTCCACCGGAAGGAGACCGACTCAGATCAGGGCGTTGGCGTTGGCGGTGGCGTT
GGCGTTGGCGGTCAGTCCTACTACTACCACCATCCGCATCCGCATCCACATCAGCAGCTGTCGTCATCCTACCGCGGGCCCCCGCCGTCCTACGTGTACCTGGCGGGGGC
CCCATTCCAGCAGAGGCCGCTGGCGCTGCCGGCGGCGTCGGGGGGCGGGGAGGAGGACGCGTCGAATCCGAGCAGCAGCGGCGGCGGGGGAGGCGGCGGCGGCGGCGGAG
GAGGGAGCAAGAAGAGATTCAGGACGAAATTCAGCGCGGAGCAGAAGGAGAAGATGTTAGGGTTTGCGGAGAGAGTTGGTTGGACGATTCAGAAACACGACGAGGCTGAC
GTGGAGCGGTTCTGCAGAGAGACCGGCGTGCGGCGGCAGGTCCTCAAGGTGTGGATGCACAATAACAAGCACACTCTCGGCACCAAACCC
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCGAGGAGGAGCACGAAGACCAAGACGACGAAATAATGGAGGACACAACGCCCATCTCCCACCACTCTCTCACCTACGACTCCACCCCGTCGCCGGCCAGAAA
GCCCCCCTCCGCCGCCGGAACAAATTTCCGGTACAGAGAGTGCCTGAAGAATCACGCCATCGGAATAGGCGGCCACGCCGTCGACGGCTGCGGCGAGTTCATGCCCGCCG
GAGAGGACGGCTCCATAGACGCACTCAAATGCGCCGCCTGTAACTGCCACCGGAATTTCCACCGGAAGGAGACCGACTCAGATCAGGGCGTTGGCGTTGGCGGTGGCGTT
GGCGTTGGCGGTCAGTCCTACTACTACCACCATCCGCATCCGCATCCACATCAGCAGCTGTCGTCATCCTACCGCGGGCCCCCGCCGTCCTACGTGTACCTGGCGGGGGC
CCCATTCCAGCAGAGGCCGCTGGCGCTGCCGGCGGCGTCGGGGGGCGGGGAGGAGGACGCGTCGAATCCGAGCAGCAGCGGCGGCGGGGGAGGCGGCGGCGGCGGCGGAG
GAGGGAGCAAGAAGAGATTCAGGACGAAATTCAGCGCGGAGCAGAAGGAGAAGATGTTAGGGTTTGCGGAGAGAGTTGGTTGGACGATTCAGAAACACGACGAGGCTGAC
GTGGAGCGGTTCTGCAGAGAGACCGGCGTGCGGCGGCAGGTCCTCAAGGTGTGGATGCACAATAACAAGCACACTCTCGGCACCAAACCC
Protein sequenceShow/hide protein sequence
MEFEEEHEDQDDEIMEDTTPISHHSLTYDSTPSPARKPPSAAGTNFRYRECLKNHAIGIGGHAVDGCGEFMPAGEDGSIDALKCAACNCHRNFHRKETDSDQGVGVGGGV
GVGGQSYYYHHPHPHPHQQLSSSYRGPPPSYVYLAGAPFQQRPLALPAASGGGEEDASNPSSSGGGGGGGGGGGGSKKRFRTKFSAEQKEKMLGFAERVGWTIQKHDEAD
VERFCRETGVRRQVLKVWMHNNKHTLGTKP