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MS001134 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001134
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold36:1698604..1699010
RNA-Seq ExpressionMS001134
SyntenyMS001134
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065108.1 hypothetical protein E6C27_scaffold82G004430 [Cucumis melo var. makuwa]1.5e-2278.75Show/hide
Query:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKN
        A  FSG+KQ   E+S MDR+K GC SFYASSQETL YVKAFFVGWGKK+TAK+E+EAA+ADLKTAKMQVQATEAAEN KN
Subjt:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKN

XP_008444894.1 PREDICTED: uncharacterized protein LOC103488109 [Cucumis melo]3.3e-2277.5Show/hide
Query:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKN
        A  FSG+KQ   E+S MDR+K GC SFYASSQETL YVKAFFVGWGKK+TAK+E+EAA+ADL+TAKMQVQATEAAEN KN
Subjt:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKN

XP_022132044.1 uncharacterized protein LOC111005010 [Momordica charantia]1.1e-25100Show/hide
Query:  MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKNQL
        MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKNQL
Subjt:  MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKNQL

XP_023001883.1 uncharacterized protein LOC111495934 [Cucurbita maxima]5.7e-2277.22Show/hide
Query:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTK
        AG FSG K+   E+S MDR+K GCM+ YASSQE LRYVKAFFVGWGKKMTAK+E+EAA+ADLK AKMQV+ATEAAENTK
Subjt:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTK

XP_038886259.1 uncharacterized protein LOC120076486 [Benincasa hispida]1.3e-2179.75Show/hide
Query:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTK
        AGTFSG+KQ   E+S MD +K G   F ASSQETLRYVKAFFVGWGKKMTAK+E+EAA+ADLKTAKMQVQATEAAENTK
Subjt:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTK

TrEMBL top hitse value%identityAlignment
A0A1S3BC67 uncharacterized protein LOC1034881091.6e-2277.5Show/hide
Query:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKN
        A  FSG+KQ   E+S MDR+K GC SFYASSQETL YVKAFFVGWGKK+TAK+E+EAA+ADL+TAKMQVQATEAAEN KN
Subjt:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKN

A0A5A7VBV2 Uncharacterized protein7.3e-2378.75Show/hide
Query:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKN
        A  FSG+KQ   E+S MDR+K GC SFYASSQETL YVKAFFVGWGKK+TAK+E+EAA+ADLKTAKMQVQATEAAEN KN
Subjt:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKN

A0A6J1BRY6 uncharacterized protein LOC1110050105.4e-26100Show/hide
Query:  MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKNQL
        MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKNQL
Subjt:  MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKNQL

A0A6J1GHI8 uncharacterized protein LOC1114540143.1e-2174.68Show/hide
Query:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTK
        AG FSG K+   E+S MDR+K GC + YASSQE LRYVKAFFVGWGKKMTAK+E+EAA+ADLK AKMQV+ATEAAEN K
Subjt:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTK

A0A6J1KRV8 uncharacterized protein LOC1114959342.8e-2277.22Show/hide
Query:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTK
        AG FSG K+   E+S MDR+K GCM+ YASSQE LRYVKAFFVGWGKKMTAK+E+EAA+ADLK AKMQV+ATEAAENTK
Subjt:  AGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38465.1 unknown protein1.3e-1152.94Show/hide
Query:  SAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKNQL
        S  DR+K+ C+S   + QE   YVKAFFVG  K++TAK E+EA +A L   KMQV AT+ AEN K +L
Subjt:  SAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKNQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGACCACAGACGAAATCAGAGTTTCAACGCCGACGCCGTCGCAGCCGTCGCAGCAGGGACGTTTTCCGGCCAGAAACAAGGAAGAAGAGAGTCATCGGCGATGGATCG
CATAAAGAGTGGGTGCATGTCCTTTTATGCATCTTCTCAGGAGACACTCCGATATGTCAAAGCTTTTTTCGTCGGCTGGGGAAAGAAGATGACAGCTAAGACCGAAGAGG
AAGCGGCAAAAGCAGATTTAAAGACTGCCAAAATGCAGGTTCAAGCTACTGAGGCAGCCGAGAACACCAAGAACCAACTT
mRNA sequenceShow/hide mRNA sequence
AAAGACCACAGACGAAATCAGAGTTTCAACGCCGACGCCGTCGCAGCCGTCGCAGCAGGGACGTTTTCCGGCCAGAAACAAGGAAGAAGAGAGTCATCGGCGATGGATCG
CATAAAGAGTGGGTGCATGTCCTTTTATGCATCTTCTCAGGAGACACTCCGATATGTCAAAGCTTTTTTCGTCGGCTGGGGAAAGAAGATGACAGCTAAGACCGAAGAGG
AAGCGGCAAAAGCAGATTTAAAGACTGCCAAAATGCAGGTTCAAGCTACTGAGGCAGCCGAGAACACCAAGAACCAACTT
Protein sequenceShow/hide protein sequence
KDHRRNQSFNADAVAAVAAGTFSGQKQGRRESSAMDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAENTKNQL