CuGenDBv2

Gene ID	MS001145
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	TPR_REGION domain-containing protein
Genome location	scaffold36:1792299..1792931
RNA-Seq Expression	MS001145
Synteny	MS001145
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022131624.1 uncharacterized protein LOC111004754 [Momordica charantia]

1.9e-99

99.05

Show/hide

Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKR FVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWL KCYEIKKLKVEAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSSP
        AREALERLSSP
Subjt:  AREALERLSSP

XP_022951869.1 uncharacterized protein LOC111454602 [Cucurbita moschata]

1.8e-89

89.52

Show/hide

Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MV DILLQI +ILVM  MFLAMH+IPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VV EADKAIALDPKDAAAHILKALALDI
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLSNEERGDAL+KRAELKMSTNRR +VDSALADLTESV +S+NANAYCWL KCYE+KKL+ EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSS
        AREALERLSS
Subjt:  AREALERLSS

XP_023002879.1 uncharacterized protein LOC111496615 [Cucurbita maxima]

2.3e-89

89.05

Show/hide

Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MV DILLQI +ILVM  MFLAMH+IPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VV EADKAIALDPKDAAAHILKALALDI
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLSNEERGDAL+KRAELKMSTNRRA+VDSA+ADLTESV +S+NANAYCWL KCYE+KKL+ EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSS
        AREALERLS+
Subjt:  AREALERLSS

XP_023537835.1 uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]

6.1e-90

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Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MV DILLQI +ILVM  MFLAMH+IPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VV EADKAIALDPKDAAAHILKALALDI
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLSNEERGDAL+KRAELKMSTNRRA+VDSALADLTESV +S+NANAYCWL KCYE+KKL+ EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSS
        AREALERLSS
Subjt:  AREALERLSS

XP_038884950.1 uncharacterized protein LOC120075535 [Benincasa hispida]

1.8e-89

90.95

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Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MV DILLQI +ILVM  MFLAMH+IPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVV EADKAIALDPKDAAAHILKALALDI
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLS+EERGDALFKRAELKMSTNRRALVDSALADLTESV +S+NAN+Y WL KCYEIKKL+ EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSS
        AREALERLSS
Subjt:  AREALERLSS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BC86 uncharacterized protein LOC103488119

3.2e-89

89.52

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Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MV DILLQI +ILVM  MFLAMH+IPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVV EA+KAIALDPKDAAAHILKALALD+
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLS+EERGDALFKRAELKMSTNRRALVDSALADLTESV +S+NAN+Y WL KCYE+KKL+ EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSS
        AREALERLSS
Subjt:  AREALERLSS

A0A5A7VBU3 TPR domain protein

3.2e-89

89.52

Show/hide

Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MV DILLQI +ILVM  MFLAMH+IPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVV EA+KAIALDPKDAAAHILKALALD+
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLS+EERGDALFKRAELKMSTNRRALVDSALADLTESV +S+NAN+Y WL KCYE+KKL+ EAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSS
        AREALERLSS
Subjt:  AREALERLSS

A0A6J1BQS5 uncharacterized protein LOC111004754

9.1e-100

99.05

Show/hide

Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKR FVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWL KCYEIKKLKVEAKKAYEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSSP
        AREALERLSSP
Subjt:  AREALERLSSP

A0A6J1GK03 uncharacterized protein LOC111454602

8.5e-90

89.52

Show/hide

Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MV DILLQI +ILVM  MFLAMH+IPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VV EADKAIALDPKDAAAHILKALALDI
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLSNEERGDAL+KRAELKMSTNRR +VDSALADLTESV +S+NANAYCWL KCYE+KKL+ EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSS
        AREALERLSS
Subjt:  AREALERLSS

A0A6J1KRQ5 uncharacterized protein LOC111496615

1.1e-89

89.05

Show/hide

Query:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI
        MV DILLQI +ILVM  MFLAMH+IPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VV EADKAIALDPKDAAAHILKALALDI
Subjt:  MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLSNEERGDAL+KRAELKMSTNRRA+VDSA+ADLTESV +S+NANAYCWL KCYE+KKL+ EAKKAYEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Query:  AREALERLSS
        AREALERLS+
Subjt:  AREALERLSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.9e-33

43.5

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Query:  DILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDIQGF
        + ++Q  I+++   MF A+  + QR   K R + RA ++++R  ++ ++LLARAR+ P +S + SLA+  + EAD  IA+ P DAA HI++ALALD+ G 
Subjt:  DILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDIQGF

Query:  KTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSR---NANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN
         TSAL+S D AL+    KSLS  ER DAL KRAE+K++ NRR  +DSA+ DL E+V ++     A  +  L +CYE K LK +A+ A+ EAL  +P   N
Subjt:  KTSALESLDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSR---NANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSN

Sequences

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CDS sequence

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ATGGTGATCGACATACTTCTCCAAATTGGTATCATCCTCGTGATGGCCTTCATGTTCCTCGCTATGCATGACATTCCCCAGAGATTCTTCGCCAAGCTTCGGTTGCGCTT
CCGAGCCGATGTCGAATCCAAACGCCACTTCGTAAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCGCCGTCGCGCTCCTCGGCGACGTCGTTGGCCGAAGAAGTTG
TAGTGGAAGCCGACAAGGCCATCGCTCTCGATCCCAAGGATGCCGCTGCTCACATCCTCAAGGCTCTGGCTCTCGACATCCAAGGATTCAAGACCTCTGCTCTCGAATCG
CTCGATACGGCTCTGTCGCCGCTCGTCGCAAAGTCGCTCAGCAATGAGGAGCGAGGAGACGCGTTGTTTAAGCGAGCTGAGTTGAAGATGTCCACGAATCGGCGAGCCCT
AGTTGACTCGGCTTTAGCAGACTTGACCGAGTCAGTGGCGATGAGTCGGAATGCGAATGCCTATTGTTGGTTGGCGAAGTGCTACGAGATCAAGAAACTGAAAGTAGAGG
CCAAGAAAGCATACGAAGAAGCGTTGAACATCGAGCCACGATTATCCAACGCTCGGGAGGCATTGGAACGCTTATCATCGCCG

mRNA sequence

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Protein sequence

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MVIDILLQIGIILVMAFMFLAMHDIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVVEADKAIALDPKDAAAHILKALALDIQGFKTSALES
LDTALSPLVAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVAMSRNANAYCWLAKCYEIKKLKVEAKKAYEEALNIEPRLSNAREALERLSSP

MS001145 (gene) of Bitter gourd (TR) v1 genome