CuGenDBv2

Gene ID	MS001157
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome C assembly protein
Genome location	scaffold36:1889221..1889364
RNA-Seq Expression	MS001157
Synteny	MS001157
Gene Ontology terms	GO:0015886 - heme transport (biological process) GO:0017004 - cytochrome complex assembly (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0031966 - mitochondrial membrane (cellular component) GO:0015232 - heme transporter activity (molecular function) GO:0020037 - heme binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

QHN95462.1 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein [Arachis hypogaea]

1.9e-15

97.92

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

QUO98208.1 cytochrome c biogenesis C [Dalbergia odorifera]

1.9e-15

97.92

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

XP_025646917.1 uncharacterized protein LOC112741938 [Arachis hypogaea]

1.9e-15

97.92

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

XP_027331742.1 uncharacterized protein LOC113847080 [Abrus precatorius]

9.4e-15

95.83

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIA AINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

YP_009498146.1 cytochrome c biogenesis C [Senna tora]

9.4e-15

95.83

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIA AINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

TrEMBL top hits

e value

%identity

Alignment

A0A2H4V4M5 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

4.6e-15

95.83

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIA AINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

A0A2H4V4Q4 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

4.6e-15

95.83

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIA AINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

A0A385G2C3 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

4.6e-15

95.83

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIA AINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

A0A444ZHG3 Cytochrom_C_asm domain-containing protein

9.2e-16

97.92

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

R4IUH3 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

4.6e-15

95.83

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSILVYIA AINTFLFLLTKHPLFLRSSG GTEMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

SwissProt top hits

e value

%identity

Alignment

P38453 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

6.2e-09

65.96

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGA
        RI+YVHVPAA MS+L+YIAMAI++ LFLLTKHPLF   S    ++GA
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGA

P92527 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein

4.9e-14

83.33

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVP A MSI+VYIA AINTFLFLLTKHPL+L SSG G EMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

Arabidopsis top hits

e value

%identity

Alignment

AT2G07681.1 Cytochrome C assembly protein

1.7e-17

89.58

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSI+VYIA AINTFLFLLTKHPL+LRSSG G EMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

AT2G07771.2 Cytochrome C assembly protein

1.7e-17

89.58

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSI+VYIA AINTFLFLLTKHPL+LRSSG G EMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

ATMG00900.1 cytochrome C biogenesis 256

1.7e-17

89.58

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Query:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF
        RILYVHVPAARMSI+VYIA AINTFLFLLTKHPL+LRSSG G EMGAF
Subjt:  RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

Sequences

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CDS sequence

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CGTATTCTATATGTACATGTTCCTGCGGCTCGAATGAGTATTCTTGTTTATATCGCTATGGCTATAAACACTTTCTTGTTCCTATTAACAAAACATCCCCTTTTTCTTCG
CTCTTCCGGAATCGGTACAGAAATGGGTGCGTTC

mRNA sequence

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CGTATTCTATATGTACATGTTCCTGCGGCTCGAATGAGTATTCTTGTTTATATCGCTATGGCTATAAACACTTTCTTGTTCCTATTAACAAAACATCCCCTTTTTCTTCG
CTCTTCCGGAATCGGTACAGAAATGGGTGCGTTC

Protein sequence

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RILYVHVPAARMSILVYIAMAINTFLFLLTKHPLFLRSSGIGTEMGAF

MS001157 (gene) of Bitter gourd (TR) v1 genome