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MS001184 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001184
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold36:2137816..2138403
RNA-Seq ExpressionMS001184
SyntenyMS001184
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131875.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia]2.4e-8098.03Show/hide
Query:  MGSLQNWHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQ
        MGSLQNWHRNKQH+SISLLLLSVSIFVDVISMAEGRG+PTPLMEGRKVEAAGSWPELPEKVGM+RSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQ
Subjt:  MGSLQNWHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQ

Query:  NQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
        NQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  NQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP

XP_022951797.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]2.3e-4364.15Show/hide
Query:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ
        MGSLQ WHRNK HLSI  L  LSV +F+ + S+AEGRG  TPLME RKVE   S  EL       RSQIGS+PPSCRRRCRECGG CEAIQVPVA+HDS 
Subjt:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ

Query:  QNQRKKRS-----SHFPAAAATSAGAS-NKDMALSSEDETSNYKPISWKCKCGNFIFNP
          ++++R+     SHF + A++S+ +S +  +ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  QNQRKKRS-----SHFPAAAATSAGAS-NKDMALSSEDETSNYKPISWKCKCGNFIFNP

XP_023002540.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]4.7e-4463.92Show/hide
Query:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ
        MGSLQ WHRNK HLSI  L  LSV +F+ + S+AEGRG  TPLME RKVE     P   E V M RSQIGS+PPSCRRRCRECGG CEA+QVPVA+HDS 
Subjt:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ

Query:  QNQRKKRS-----SHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
          ++++R+     SHF + A++S  + +  +ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  QNQRKKRS-----SHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP

XP_023538508.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]9.5e-4563.58Show/hide
Query:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ
        MGSLQ WHRNK HLSI  L  LSV +F+ + SMAEGRG  TPLME RKVE     P   E V M RSQIGS+PPSCRRRCRECGG CEA+QVPVA+HDS 
Subjt:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ

Query:  QNQRKKRS------SHFPAAAATSAGAS---NKDMALSSEDETSNYKPISWKCKCGNFIFNP
          ++++R+      SHF + A++S+ +S   +  +ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  QNQRKKRS------SHFPAAAATSAGAS---NKDMALSSEDETSNYKPISWKCKCGNFIFNP

XP_038886514.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Benincasa hispida]7.3e-4568.15Show/hide
Query:  MGSLQNWHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVG-MMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHD-S
        MGS QNWHR K H+SISLL LSVSI + V S+ EGRG+   L  GR      +  E  EK G MMR+QIGSRPPSCRRRCRECGGHCEA+QVPVALHD S
Subjt:  MGSLQNWHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVG-MMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHD-S

Query:  QQNQRKK---RSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
         QNQRKK   RSSHF          S  D+ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  QQNQRKK---RSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP

TrEMBL top hitse value%identityAlignment
A0A0A0LPQ0 Epidermal patterning factor-like protein1.8e-4164.94Show/hide
Query:  MGSLQNWHRNK-QHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVG-MMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDS
        MGS Q WHRN+ +H+SI LL LSV I + V S+ EGRG+    MEG +  A  +  E  EK+G MMR+QIGSRPPSCRR+CRECGGHCEA+QVPVALHDS
Subjt:  MGSLQNWHRNK-QHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVG-MMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDS

Query:  QQNQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
         QNQRK R     ++   S   S  D+ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  QQNQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP

A0A1S3BBM2 Epidermal patterning factor-like protein1.3e-3962.42Show/hide
Query:  MGSLQNWHRNK-QHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEA---AGSWPELPEKVG-MMRSQIGSRPPSCRRRCRECGGHCEAIQVPVAL
        MGS Q WHRN+ +H+SI LL LSV I + V S+ EGRG+    MEG +  A   A +  E  EK+G MMR+QIGSRPPSCRR+C ECGGHCEA+QVPVAL
Subjt:  MGSLQNWHRNK-QHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEA---AGSWPELPEKVG-MMRSQIGSRPPSCRRRCRECGGHCEAIQVPVAL

Query:  HDSQQNQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
        HDS QNQ+K R     ++    +  S  D+ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  HDSQQNQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1BQW9 Epidermal patterning factor-like protein1.2e-8098.03Show/hide
Query:  MGSLQNWHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQ
        MGSLQNWHRNKQH+SISLLLLSVSIFVDVISMAEGRG+PTPLMEGRKVEAAGSWPELPEKVGM+RSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQ
Subjt:  MGSLQNWHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQ

Query:  NQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
        NQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  NQRKKRSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1GIN2 Epidermal patterning factor-like protein1.1e-4364.15Show/hide
Query:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ
        MGSLQ WHRNK HLSI  L  LSV +F+ + S+AEGRG  TPLME RKVE   S  EL       RSQIGS+PPSCRRRCRECGG CEAIQVPVA+HDS 
Subjt:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ

Query:  QNQRKKRS-----SHFPAAAATSAGAS-NKDMALSSEDETSNYKPISWKCKCGNFIFNP
          ++++R+     SHF + A++S+ +S +  +ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  QNQRKKRS-----SHFPAAAATSAGAS-NKDMALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1KP85 Epidermal patterning factor-like protein2.3e-4463.92Show/hide
Query:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ
        MGSLQ WHRNK HLSI  L  LSV +F+ + S+AEGRG  TPLME RKVE     P   E V M RSQIGS+PPSCRRRCRECGG CEA+QVPVA+HDS 
Subjt:  MGSLQNWHRNKQHLSIS-LLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQ

Query:  QNQRKKRS-----SHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
          ++++R+     SHF + A++S  + +  +ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  QNQRKKRS-----SHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP

SwissProt top hitse value%identityAlignment
Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 18.2e-0733.66Show/hide
Query:  PELPEKVGMM--RSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAATSAGASNKDMALSSE-DETSNYKPISWKCKCGNFIFN
        P +  +V ++  ++++GS PPSC  RC  C   C AIQVP               S F      S G      +L++  D+ SNYKP+ WKC C    +N
Subjt:  PELPEKVGMM--RSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAATSAGASNKDMALSSE-DETSNYKPISWKCKCGNFIFN

Query:  P
        P
Subjt:  P

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 25.7e-1638.78Show/hide
Query:  WHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRR-RCRECGGHCEAIQVPVALHDSQQNQRKK
        W  N     + LL+L+ + F     MA GR  P        VE   S  +  +   MMR  IGSRPP C R RCR C GHCEAIQVP            +
Subjt:  WHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRR-RCRECGGHCEAIQVPVALHDSQQNQRKK

Query:  RSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
           H P   ++S+ +    +  +  D+++NYKP+SWKCKCGN I+NP
Subjt:  RSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP

Arabidopsis top hitse value%identityAlignment
AT4G37810.1 unknown protein4.0e-1738.78Show/hide
Query:  WHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRR-RCRECGGHCEAIQVPVALHDSQQNQRKK
        W  N     + LL+L+ + F     MA GR  P        VE   S  +  +   MMR  IGSRPP C R RCR C GHCEAIQVP            +
Subjt:  WHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRR-RCRECGGHCEAIQVPVALHDSQQNQRKK

Query:  RSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP
           H P   ++S+ +    +  +  D+++NYKP+SWKCKCGN I+NP
Subjt:  RSSHFPAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP

AT5G10310.1 unknown protein5.8e-0833.66Show/hide
Query:  PELPEKVGMM--RSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAATSAGASNKDMALSSE-DETSNYKPISWKCKCGNFIFN
        P +  +V ++  ++++GS PPSC  RC  C   C AIQVP               S F      S G      +L++  D+ SNYKP+ WKC C    +N
Subjt:  PELPEKVGMM--RSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHFPAAAATSAGASNKDMALSSE-DETSNYKPISWKCKCGNFIFN

Query:  P
        P
Subjt:  P


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGCCTTCAAAATTGGCACAGAAACAAACAACACCTTTCAATTTCCTTGCTCCTCCTCTCTGTTTCCATCTTTGTTGATGTCATATCCATGGCTGAAGGCAGAGG
AATGCCAACTCCATTAATGGAGGGCAGGAAGGTGGAGGCAGCAGGCAGCTGGCCGGAGCTGCCGGAGAAAGTGGGGATGATGAGGAGTCAAATAGGGTCACGGCCGCCGA
GCTGCCGGAGAAGGTGCAGGGAATGCGGCGGACATTGTGAGGCAATTCAAGTACCAGTGGCACTGCATGACTCACAACAGAATCAAAGGAAAAAAAGAAGCAGCCATTTC
CCTGCTGCAGCGGCAACATCAGCAGGAGCTTCAAACAAGGATATGGCTCTCTCTAGTGAAGATGAGACCTCTAATTACAAACCCATAAGCTGGAAATGCAAGTGTGGGAA
CTTCATCTTCAACCCA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGCCTTCAAAATTGGCACAGAAACAAACAACACCTTTCAATTTCCTTGCTCCTCCTCTCTGTTTCCATCTTTGTTGATGTCATATCCATGGCTGAAGGCAGAGG
AATGCCAACTCCATTAATGGAGGGCAGGAAGGTGGAGGCAGCAGGCAGCTGGCCGGAGCTGCCGGAGAAAGTGGGGATGATGAGGAGTCAAATAGGGTCACGGCCGCCGA
GCTGCCGGAGAAGGTGCAGGGAATGCGGCGGACATTGTGAGGCAATTCAAGTACCAGTGGCACTGCATGACTCACAACAGAATCAAAGGAAAAAAAGAAGCAGCCATTTC
CCTGCTGCAGCGGCAACATCAGCAGGAGCTTCAAACAAGGATATGGCTCTCTCTAGTGAAGATGAGACCTCTAATTACAAACCCATAAGCTGGAAATGCAAGTGTGGGAA
CTTCATCTTCAACCCA
Protein sequenceShow/hide protein sequence
MGSLQNWHRNKQHLSISLLLLSVSIFVDVISMAEGRGMPTPLMEGRKVEAAGSWPELPEKVGMMRSQIGSRPPSCRRRCRECGGHCEAIQVPVALHDSQQNQRKKRSSHF
PAAAATSAGASNKDMALSSEDETSNYKPISWKCKCGNFIFNP