; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS001189 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS001189
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionoxidative stress 3
Genome locationscaffold36:2175027..2175583
RNA-Seq ExpressionMS001189
SyntenyMS001189
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065056.1 uncharacterized protein E6C27_scaffold82G003850 [Cucumis melo var. makuwa]3.8e-3664.2Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSF--SSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLS
        ME   LT DADFATSVLC+ W R+EEK  + H Q  ++  E STSS GS++S ++C DD LSSF  SSSSSSSSSLSSTSSL SQSE R QQ+P KKGLS
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSF--SSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLS

Query:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS
        KFY+GKSRTF+SL DVK I+DLAK + ++RKKD+R  +S  A ISKK GRS FA+LV K D+
Subjt:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS

KAG7029705.1 hypothetical protein SDJN02_08047 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3060.48Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLP---HFQLGLSCLEDSTSSFGSVTSL------NLC-DDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLP
        MEF  LT DADFATS+    + R+EEK  +P   HF + +SC EDSTSS GS++SL      +LC DDALSSFSSSSSSSSSL S   +    E +Q L 
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLP---HFQLGLSCLEDSTSSFGSVTSL------NLC-DDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLP

Query:  TKKGLSKFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKAD
         KKGLSKFY+GKSRTF+SL DVKC+EDLAKGEN+YRKK SR  ++  A ISKK GR+S A+LV K D
Subjt:  TKKGLSKFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKAD

XP_008444987.1 PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo]9.0e-3866.05Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSF--SSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLS
        ME   LT DADFATSVLC+ W R+EEK  + HFQ  ++  E STSS GS++S ++C DD LSSF  SSSSSSSSSLSSTSSL SQSE R QQ+P KKGLS
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSF--SSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLS

Query:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS
        KFY+GKSRTF+SL DVK IEDLAK E ++RKKD+R  +S  A ISKK GRS FA+LV K D+
Subjt:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS

XP_022961691.1 uncharacterized protein LOC111462384 [Cucurbita moschata]2.4e-3060.87Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLP---HFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLPTKKGLS
        MEF  LT DADFATS+    + R+EEK  +P   HF + +SC EDSTSS GS +S +LC DDALSSFSSSSSSSS LS         E +Q L  KKGLS
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLP---HFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLPTKKGLS

Query:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKAD
        KFY+GKSRTF+SL DVKC++DLAKGEN+YRKK SR  ++  A ISKK GR+S A+LV K D
Subjt:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKAD

XP_031737345.1 uncharacterized protein LOC105434656 [Cucumis sativus]2.8e-3967.5Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLCD-DALSSFSSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLSKF
        ME   LT DADFATSVLC+ W R+EEK  + HFQ  ++  E STSS GS++S ++CD DALSSF SSSSS SSLSSTSSL SQSE R QQLP KKGLSKF
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLCD-DALSSFSSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLSKF

Query:  YQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS
        Y+GKSRTF+SL DVK IEDLAK EN+Y+KKD+R  +S  A ISKK GRSSFA+++ KAD+
Subjt:  YQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS

TrEMBL top hitse value%identityAlignment
A0A0A0LLW5 Uncharacterized protein2.3e-1565.96Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLCD-DALSSFSSSSSSSSSLSSTSSLPSQSEPR-QQLPTK
        ME   LT DADFATSVLC+ W R+EEK  + HFQ  ++  E STSS GS++S ++CD DALSSF SSSSS SSLSSTSSL SQSE R QQLP K
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLCD-DALSSFSSSSSSSSSLSSTSSLPSQSEPR-QQLPTK

A0A1S3BBN3 uncharacterized protein LOC1034881654.3e-3866.05Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSF--SSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLS
        ME   LT DADFATSVLC+ W R+EEK  + HFQ  ++  E STSS GS++S ++C DD LSSF  SSSSSSSSSLSSTSSL SQSE R QQ+P KKGLS
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSF--SSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLS

Query:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS
        KFY+GKSRTF+SL DVK IEDLAK E ++RKKD+R  +S  A ISKK GRS FA+LV K D+
Subjt:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS

A0A5A7VFF0 Uncharacterized protein1.8e-3664.2Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSF--SSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLS
        ME   LT DADFATSVLC+ W R+EEK  + H Q  ++  E STSS GS++S ++C DD LSSF  SSSSSSSSSLSSTSSL SQSE R QQ+P KKGLS
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSF--SSSSSSSSSLSSTSSLPSQSEPR-QQLPTKKGLS

Query:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS
        KFY+GKSRTF+SL DVK I+DLAK + ++RKKD+R  +S  A ISKK GRS FA+LV K D+
Subjt:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS

A0A6J1HB27 uncharacterized protein LOC1114623841.1e-3060.87Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLP---HFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLPTKKGLS
        MEF  LT DADFATS+    + R+EEK  +P   HF + +SC EDSTSS GS +S +LC DDALSSFSSSSSSSS LS         E +Q L  KKGLS
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLP---HFQLGLSCLEDSTSSFGSVTSLNLC-DDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLPTKKGLS

Query:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKAD
        KFY+GKSRTF+SL DVKC++DLAKGEN+YRKK SR  ++  A ISKK GR+S A+LV K D
Subjt:  KFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKAD

A0A6J1KC75 uncharacterized protein LOC1114919764.8e-2960.49Show/hide
Query:  MEFGHLTADADFATSVLCNHWKRREEKITLPH---FQLGLSCLEDSTSSFG-SVTSLNLC-DDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLPTKKGL
        MEF  LT DADFATS+    + R+EEK  +PH   F + +SC EDSTSS G S +S +LC DDALSSFSSSSSSSS LS         E +Q L  KKGL
Subjt:  MEFGHLTADADFATSVLCNHWKRREEKITLPH---FQLGLSCLEDSTSSFG-SVTSLNLC-DDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLPTKKGL

Query:  SKFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKAD
        SKFY+GKSRTF+SL DVKC+E+LAKGEN+YRKK SR  ++  A ISKK GR S A+LV K D
Subjt:  SKFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26288.1 FUNCTIONS IN: molecular_function unknown1.6e-0537.29Show/hide
Query:  GLSCLEDSTSSFGSVTSLNLCDDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLP----TKKGLSKFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSR
        G+  +  S++   S +S+++C   L+  +SSSSSSSS SS       S+   QLP     K GLSK+Y+GKS++FTSL +V  ++DL K  +  +    R
Subjt:  GLSCLEDSTSSFGSVTSLNLCDDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLP----TKKGLSKFYQGKSRTFTSLLDVKCIEDLAKGENNYRKKDSR

Query:  KSL-SANAIISKKVGRSS
               A IS K  R+S
Subjt:  KSL-SANAIISKKVGRSS

AT5G56550.1 oxidative stress 34.3e-0636.24Show/hide
Query:  REEKITLPHFQLGLSCLEDSTSSFGSVTSLNLCDDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLPTKKGLSKFYQGKSRTFTSLLDVKCIEDLAK---
        +EE+  +       S  ED++SS     S ++C D          SSS  SS   L   S+    LP K+GLSKFY+GKS++FTSL +VK +EDL K   
Subjt:  REEKITLPHFQLGLSCLEDSTSSFGSVTSLNLCDDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLPTKKGLSKFYQGKSRTFTSLLDVKCIEDLAK---

Query:  GENNY--RKKDSRKS-----------LSANAIISKKVGRSSFASLVCKA
           NY  ++K SR +            S  A ISKK  R+  + L C A
Subjt:  GENNY--RKKDSRKS-----------LSANAIISKKVGRSSFASLVCKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTGGACACTTGACAGCTGATGCAGATTTTGCTACAAGTGTTCTATGTAACCATTGGAAGAGAAGGGAAGAGAAGATCACTCTCCCTCATTTTCAACTCGGTCT
ATCGTGTTTGGAAGATTCAACTAGCTCTTTTGGATCGGTAACGTCATTGAACCTTTGTGACGATGCATTGTCATCATTTTCTTCATCTTCTTCTTCGTCTTCGTCGTTAT
CTTCAACTTCATCTTTGCCATCTCAAAGCGAACCTCGTCAACAACTTCCAACCAAAAAAGGGTTGTCCAAGTTTTATCAAGGAAAGTCACGAACCTTCACATCCTTGTTG
GATGTGAAATGCATAGAAGATCTAGCAAAGGGGGAGAATAATTATAGAAAGAAAGACTCGAGAAAATCGCTTAGTGCTAATGCTATCATATCAAAGAAGGTTGGAAGGAG
CTCTTTTGCATCCTTGGTGTGCAAGGCAGATAGT
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTGGACACTTGACAGCTGATGCAGATTTTGCTACAAGTGTTCTATGTAACCATTGGAAGAGAAGGGAAGAGAAGATCACTCTCCCTCATTTTCAACTCGGTCT
ATCGTGTTTGGAAGATTCAACTAGCTCTTTTGGATCGGTAACGTCATTGAACCTTTGTGACGATGCATTGTCATCATTTTCTTCATCTTCTTCTTCGTCTTCGTCGTTAT
CTTCAACTTCATCTTTGCCATCTCAAAGCGAACCTCGTCAACAACTTCCAACCAAAAAAGGGTTGTCCAAGTTTTATCAAGGAAAGTCACGAACCTTCACATCCTTGTTG
GATGTGAAATGCATAGAAGATCTAGCAAAGGGGGAGAATAATTATAGAAAGAAAGACTCGAGAAAATCGCTTAGTGCTAATGCTATCATATCAAAGAAGGTTGGAAGGAG
CTCTTTTGCATCCTTGGTGTGCAAGGCAGATAGT
Protein sequenceShow/hide protein sequence
MEFGHLTADADFATSVLCNHWKRREEKITLPHFQLGLSCLEDSTSSFGSVTSLNLCDDALSSFSSSSSSSSSLSSTSSLPSQSEPRQQLPTKKGLSKFYQGKSRTFTSLL
DVKCIEDLAKGENNYRKKDSRKSLSANAIISKKVGRSSFASLVCKADS